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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP916349
Clone id YMU001_000086_F10
Library
Length 527
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000086_F10.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
TTTGAAGGAATATGGAGACAACAAGCTACCTATTGCCAGGAAAATAGCTACATTTTCAAG
CATGAGAACCTCTCTGCAGCAGCTTCATAGCTAAACCAGCCAGCTTGGCACAATATTCGA
TTCTTTTAGAAACACATGACTGCCATTGCAAACATTCATTGCATCATTACCAACAGGAGG
ATTCCTGAAAACTTTCTTTTGAGACTTTCTCTTCCCATAAGGAGCATGGCCAAACTCCAG
AGGGACTCAAGACGAAGGCTTCCTGCATACAAATACAAAGAGTGAATCTGGATTCTCCAA
AACAAAATTGTTGGCATAAGTACCATCTGCATTAAGCTGTACAGGCTCTCTATAAGTTCT
TAATCGGTCGTCTGGATCCATGTCTGCATCAGGTTGTGGTATGATGAACAAAGTCACATG
CCAACCAAAAGCTTTTGTGTTAAGGAGTGGAAATCTAGATTCAGGATTTCCAGTTGTGAT
CAACATGTAAACACCACCAGGCTTCAACACCCTGGAGCACATAACTG
■■Homology search results ■■ -
sp_hit_id A8MUP2
Definition sp|A8MUP2|YK044_HUMAN Putative methyltransferase LOC751071, mitochondrial OS=Homo sapiens
Align length 37
Score (bit) 33.9
E-value 0.49
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP916349|Adiantum capillus-veneris mRNA, clone:
YMU001_000086_F10.
         (527 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|A8MUP2|YK044_HUMAN Putative methyltransferase LOC751071, mito...    34   0.49 
sp|P48790|XYLA_CLOSR Xylosidase/arabinosidase OS=Clostridium ste...    33   0.84 
sp|Q5RCI5|YK044_PONAB Putative methyltransferase LOC751071 homol...    32   2.4  
sp|Q8BMD7|MORC4_MOUSE MORC family CW-type zinc finger protein 4 ...    30   5.4  
sp|O83733|Y752_TREPA Uncharacterized protein TP_0752 OS=Treponem...    30   7.1  
sp|P38085|VAL1_YEAST Valine/tyrosine/tryptophan amino-acid perme...    30   7.1  
sp|Q8TE76|MORC4_HUMAN MORC family CW-type zinc finger protein 4 ...    30   9.2  

>sp|A8MUP2|YK044_HUMAN Putative methyltransferase LOC751071,
           mitochondrial OS=Homo sapiens PE=2 SV=1
          Length = 240

 Score = 33.9 bits (76), Expect = 0.49
 Identities = 14/37 (37%), Positives = 21/37 (56%)
 Frame = -3

Query: 519 CSRVLKPGGVYMLITTGNPESRFPLLNTKAFGWHVTL 409
           C RVL P G  +  +  +P+ R P L   ++GW VT+
Sbjct: 184 CLRVLNPQGTLIQFSDEDPDVRLPCLEQGSYGWTVTV 220


>sp|P48790|XYLA_CLOSR Xylosidase/arabinosidase OS=Clostridium
           stercorarium GN=xylA PE=1 SV=1
          Length = 473

 Score = 33.1 bits (74), Expect = 0.84
 Identities = 18/57 (31%), Positives = 26/57 (45%)
 Frame = -3

Query: 423 WHVTLFIIPQPDADMDPDDRLRTYREPVQLNADGTYANNFVLENPDSLFVFVCRKPS 253
           W     I  + D  ++PD R+  Y   V L  DG Y   +VL+    + V VC  P+
Sbjct: 60  WRYEGVIYRKTDDPLNPDGRMCLYAPDVTLGPDGRYYLYYVLDKVPVVSVAVCDTPA 116


>sp|Q5RCI5|YK044_PONAB Putative methyltransferase LOC751071 homolog,
           mitochondrial OS=Pongo abelii PE=2 SV=1
          Length = 240

 Score = 31.6 bits (70), Expect = 2.4
 Identities = 14/37 (37%), Positives = 20/37 (54%)
 Frame = -3

Query: 519 CSRVLKPGGVYMLITTGNPESRFPLLNTKAFGWHVTL 409
           C RVL P G  +  +  +P+ R P L   + GW VT+
Sbjct: 184 CLRVLNPQGTLIQFSDEDPDVRLPCLEQGSRGWTVTV 220


>sp|Q8BMD7|MORC4_MOUSE MORC family CW-type zinc finger protein 4
           OS=Mus musculus GN=Morc4 PE=2 SV=2
          Length = 928

 Score = 30.4 bits (67), Expect = 5.4
 Identities = 12/34 (35%), Positives = 20/34 (58%), Gaps = 8/34 (23%)
 Frame = -2

Query: 217 WEEKVSKESFQ--------ESSCW**CNECLQWQ 140
           W+EK+S+E+F+            W  C+ECL+W+
Sbjct: 400 WKEKISQENFEPLPTSRRIPDQTWVQCDECLKWR 433


>sp|O83733|Y752_TREPA Uncharacterized protein TP_0752 OS=Treponema
           pallidum GN=TP_0752 PE=4 SV=1
          Length = 380

 Score = 30.0 bits (66), Expect = 7.1
 Identities = 15/41 (36%), Positives = 24/41 (58%)
 Frame = +3

Query: 51  HFQA*EPLCSSFIAKPASLAQYSILLETHDCHCKHSLHHYQ 173
           +F+   PL SSF  K  +L+ ++  LE HD H + + H Y+
Sbjct: 53  YFEQHIPLLSSFTEKKEALSLFAQYLELHDAH-ERAAHRYR 92


>sp|P38085|VAL1_YEAST Valine/tyrosine/tryptophan amino-acid permease
           OS=Saccharomyces cerevisiae GN=VAP1 PE=1 SV=1
          Length = 619

 Score = 30.0 bits (66), Expect = 7.1
 Identities = 24/64 (37%), Positives = 27/64 (42%), Gaps = 1/64 (1%)
 Frame = +3

Query: 81  SFIAKPASLAQYSILLETHDCHCKHSLHHYQQEDS*KLSFETFSSHKE-HGQTPEGLKTK 257
           SFIAK AS AQYS           HSLH     +  K  F       E  GQT E  +T 
Sbjct: 6   SFIAKEASPAQYS-----------HSLHERTHSEKQKRDFTITEKQDEVSGQTAEPRRTD 54

Query: 258 ASCI 269
           +  I
Sbjct: 55  SKSI 58


>sp|Q8TE76|MORC4_HUMAN MORC family CW-type zinc finger protein 4
           OS=Homo sapiens GN=MORC4 PE=1 SV=2
          Length = 937

 Score = 29.6 bits (65), Expect = 9.2
 Identities = 13/42 (30%), Positives = 22/42 (52%), Gaps = 11/42 (26%)
 Frame = -2

Query: 217 WEEKVSKESFQESSC-----------W**CNECLQWQSCVSK 125
           W+EK S+++F+ S+            W  C+ECL+W+    K
Sbjct: 400 WKEKTSQDNFETSTVARPIPKVPDQTWVQCDECLKWRKLPGK 441
tr_hit_id A7Q206
Definition tr|A7Q206|A7Q206_VITVI Chromosome chr13 scaffold_45, whole genome shotgun sequence OS=Vitis vinifera
Align length 101
Score (bit) 79.7
E-value 8.0e-14
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP916349|Adiantum capillus-veneris mRNA, clone:
YMU001_000086_F10.
         (527 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A7Q206|A7Q206_VITVI Chromosome chr13 scaffold_45, whole genom...    80   8e-14
tr|Q9LZX3|Q9LZX3_ARATH Putative uncharacterized protein T4C21_32...    76   9e-13
tr|Q8RXT8|Q8RXT8_ARATH Putative uncharacterized protein At3g6091...    76   9e-13
tr|A9TRY3|A9TRY3_PHYPA Predicted protein OS=Physcomitrella paten...    76   9e-13
tr|Q60ES1|Q60ES1_ORYSJ Putative uncharacterized protein OJ1764_D...    65   3e-09
tr|Q0DIG0|Q0DIG0_ORYSJ Os05g0392200 protein (Fragment) OS=Oryza ...    65   3e-09
tr|B8AXZ9|B8AXZ9_ORYSI Putative uncharacterized protein OS=Oryza...    64   4e-09
tr|B6U1V3|B6U1V3_MAIZE Methylase OS=Zea mays PE=2 SV=1                 63   8e-09
tr|A9RCR1|A9RCR1_PHYPA Predicted protein OS=Physcomitrella paten...    61   4e-08
tr|A8IN22|A8IN22_CHLRE SAM-dependent methyltransferase OS=Chlamy...    57   7e-07
tr|A3BN01|A3BN01_ORYSJ Putative uncharacterized protein OS=Oryza...    56   1e-06
tr|Q9LUT4|Q9LUT4_ARATH Gb|AAF34859.1 OS=Arabidopsis thaliana PE=...    52   2e-05
tr|Q949P5|Q949P5_ARATH Putative uncharacterized protein At3g1736...    52   2e-05
tr|B7FIQ1|B7FIQ1_MEDTR Putative uncharacterized protein OS=Medic...    50   9e-05
tr|B8B8W6|B8B8W6_ORYSI Putative uncharacterized protein OS=Oryza...    48   3e-04
tr|A7NVX7|A7NVX7_VITVI Chromosome chr5 scaffold_2, whole genome ...    48   3e-04
tr|A3BUV3|A3BUV3_ORYSJ Putative uncharacterized protein OS=Oryza...    48   3e-04
tr|Q7EZA5|Q7EZA5_ORYSJ Putative uncharacterized protein P0700D12...    47   6e-04
tr|Q54SL7|Q54SL7_DICDI Putative uncharacterized protein OS=Dicty...    46   0.001
tr|B6KA75|B6KA75_TOXGO Putative uncharacterized protein OS=Toxop...    44   0.005
tr|A3B3Q3|A3B3Q3_ORYSJ Putative uncharacterized protein OS=Oryza...    44   0.007
tr|B4FH40|B4FH40_MAIZE Methylase OS=Zea mays PE=2 SV=1                 40   0.055
tr|Q1KYP1|Q1KYP1_9EUKA Putative uncharacterized protein OS=Streb...    39   0.16 
tr|A0BJY2|A0BJY2_PARTE Chromosome undetermined scaffold_111, who...    39   0.21 
tr|A8HZ69|A8HZ69_CHLRE Predicted protein OS=Chlamydomonas reinha...    38   0.36 
tr|A8J4E1|A8J4E1_CHLRE Predicted protein (Fragment) OS=Chlamydom...    37   0.47 
tr|A0E9U6|A0E9U6_PARTE Chromosome undetermined scaffold_85, whol...    37   0.47 
tr|A9TQ01|A9TQ01_PHYPA Predicted protein OS=Physcomitrella paten...    37   0.61 
tr|Q4Y7P3|Q4Y7P3_PLACH Putative uncharacterized protein (Fragmen...    37   0.61 
tr|A6LG64|A6LG64_PARD8 Deoxyribose-phosphate aldolase OS=Parabac...    35   1.8  

>tr|A7Q206|A7Q206_VITVI Chromosome chr13 scaffold_45, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00028686001
           PE=4 SV=1
          Length = 253

 Score = 79.7 bits (195), Expect = 8e-14
 Identities = 40/101 (39%), Positives = 56/101 (55%), Gaps = 2/101 (1%)
 Frame = -3

Query: 516 SRVLKPGGVYMLITTGNPESRFPLLNTKAFGWHVTLFIIPQP--DADMDPDDRLRTYREP 343
           SR+LKPGG+YMLIT G+P  R P L    + W V L++IP+P            ++Y EP
Sbjct: 146 SRLLKPGGIYMLITYGDPTVRMPHLGRPVYNWKVVLYVIPRPGFQKPAGSTSSAKSYLEP 205

Query: 342 VQLNADGTYANNFVLENPDSLFVFVCRKPSS*VPLEFGHAP 220
           V     G     FVLE+PDS ++++C+K       E G+ P
Sbjct: 206 VPTTEKGLLLPGFVLEDPDSHYIYICKKMDE--TAELGNIP 244


>tr|Q9LZX3|Q9LZX3_ARATH Putative uncharacterized protein T4C21_320
           OS=Arabidopsis thaliana GN=T4C21_320 PE=4 SV=1
          Length = 248

 Score = 76.3 bits (186), Expect = 9e-13
 Identities = 33/88 (37%), Positives = 56/88 (63%), Gaps = 2/88 (2%)
 Frame = -3

Query: 516 SRVLKPGGVYMLITTGNPESRFPLLNTKAFGWHVTLFIIPQPDADMDP--DDRLRTYREP 343
           SR++KPGG Y LIT G+P+ R P L   A+ W ++L+IIP+P            ++  E 
Sbjct: 142 SRLIKPGGTYFLITYGDPKVRMPHLTRSAYNWKISLYIIPRPGFKRPESCSSSAKSCMEA 201

Query: 342 VQLNADGTYANNFVLENPDSLFVFVCRK 259
           + + ++G   +++VLE+PDS F+++C+K
Sbjct: 202 IPITSEGMLPHDYVLEDPDSHFIYICKK 229


>tr|Q8RXT8|Q8RXT8_ARATH Putative uncharacterized protein At3g60910
           OS=Arabidopsis thaliana GN=At3g60910 PE=2 SV=1
          Length = 252

 Score = 76.3 bits (186), Expect = 9e-13
 Identities = 33/88 (37%), Positives = 56/88 (63%), Gaps = 2/88 (2%)
 Frame = -3

Query: 516 SRVLKPGGVYMLITTGNPESRFPLLNTKAFGWHVTLFIIPQPDADMDP--DDRLRTYREP 343
           SR++KPGG Y LIT G+P+ R P L   A+ W ++L+IIP+P            ++  E 
Sbjct: 146 SRLIKPGGTYFLITYGDPKVRMPHLTRSAYNWKISLYIIPRPGFKRPESCSSSAKSCMEA 205

Query: 342 VQLNADGTYANNFVLENPDSLFVFVCRK 259
           + + ++G   +++VLE+PDS F+++C+K
Sbjct: 206 IPITSEGMLPHDYVLEDPDSHFIYICKK 233


>tr|A9TRY3|A9TRY3_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_149610 PE=4 SV=1
          Length = 236

 Score = 76.3 bits (186), Expect = 9e-13
 Identities = 38/85 (44%), Positives = 50/85 (58%)
 Frame = -3

Query: 513 RVLKPGGVYMLITTGNPESRFPLLNTKAFGWHVTLFIIPQPDADMDPDDRLRTYREPVQL 334
           RVLKPGGVYMLIT G+P  R P L ++   W + L ++P+P +    +   R   EPV L
Sbjct: 144 RVLKPGGVYMLITYGDPRVRIPHLKSEEAPWEIKLHVLPRPGSKRAHEGTSRPITEPVSL 203

Query: 333 NADGTYANNFVLENPDSLFVFVCRK 259
             D T    F LE+PD  +V+VC K
Sbjct: 204 GEDLTLGPTFKLEDPDLHYVYVCIK 228


>tr|Q60ES1|Q60ES1_ORYSJ Putative uncharacterized protein
           OJ1764_D01.11 OS=Oryza sativa subsp. japonica
           GN=OJ1764_D01.11 PE=4 SV=1
          Length = 168

 Score = 64.7 bits (156), Expect = 3e-09
 Identities = 32/92 (34%), Positives = 53/92 (57%), Gaps = 3/92 (3%)
 Frame = -3

Query: 516 SRVLKPGGVYMLITTGNPESRFPLLNTKAFGWHVTLFIIPQPDADMDPDDRL---RTYRE 346
           +R+L+PGG+YMLIT G P+ R  LL        + L+I+P P   +     +   +   E
Sbjct: 59  ARILRPGGIYMLITYGCPKERVQLLYQSGSHKKIELYIMPTPGYQLKWSKGVSLAQPIME 118

Query: 345 PVQLNADGTYANNFVLENPDSLFVFVCRKPSS 250
            V L  DG    ++VL++P+S F+++C+KP +
Sbjct: 119 EVSLTVDGQLPPDYVLKDPESHFIYICKKPDA 150


>tr|Q0DIG0|Q0DIG0_ORYSJ Os05g0392200 protein (Fragment) OS=Oryza
           sativa subsp. japonica GN=Os05g0392200 PE=4 SV=1
          Length = 171

 Score = 64.7 bits (156), Expect = 3e-09
 Identities = 32/92 (34%), Positives = 53/92 (57%), Gaps = 3/92 (3%)
 Frame = -3

Query: 516 SRVLKPGGVYMLITTGNPESRFPLLNTKAFGWHVTLFIIPQPDADMDPDDRL---RTYRE 346
           +R+L+PGG+YMLIT G P+ R  LL        + L+I+P P   +     +   +   E
Sbjct: 62  ARILRPGGIYMLITYGCPKERVQLLYQSGSHKKIELYIMPTPGYQLKWSKGVSLAQPIME 121

Query: 345 PVQLNADGTYANNFVLENPDSLFVFVCRKPSS 250
            V L  DG    ++VL++P+S F+++C+KP +
Sbjct: 122 EVSLTVDGQLPPDYVLKDPESHFIYICKKPDA 153


>tr|B8AXZ9|B8AXZ9_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_19841 PE=4 SV=1
          Length = 265

 Score = 64.3 bits (155), Expect = 4e-09
 Identities = 32/92 (34%), Positives = 53/92 (57%), Gaps = 3/92 (3%)
 Frame = -3

Query: 516 SRVLKPGGVYMLITTGNPESRFPLLNTKAFGWHVTLFIIPQPDADMDPDDRL---RTYRE 346
           +R+L+PGG+YMLIT G P+ R  LL        + L+I+P P   +     +   +   E
Sbjct: 156 ARILRPGGIYMLITYGCPKERVQLLYQAGSHKKIELYIMPTPGYQLKWSKGVSLAQPIME 215

Query: 345 PVQLNADGTYANNFVLENPDSLFVFVCRKPSS 250
            V L  DG    ++VL++P+S F+++C+KP +
Sbjct: 216 EVSLTVDGQLPPDYVLKDPESHFIYICKKPDA 247


>tr|B6U1V3|B6U1V3_MAIZE Methylase OS=Zea mays PE=2 SV=1
          Length = 258

 Score = 63.2 bits (152), Expect = 8e-09
 Identities = 32/87 (36%), Positives = 47/87 (54%), Gaps = 1/87 (1%)
 Frame = -3

Query: 516 SRVLKPGGVYMLITTGNPESRFPLLNTKAFGWHVTLFIIPQPDADMDPDDRL-RTYREPV 340
           +R+L P G+Y+LIT G P+ R PLLN     W + L+I+P     +           E V
Sbjct: 152 ARLLMPHGIYLLITYGAPKERVPLLNQSGCSWSIALYIMPTAGYQLRMSKGAPHLIMEEV 211

Query: 339 QLNADGTYANNFVLENPDSLFVFVCRK 259
            L   G    ++VL++PDS F++VC K
Sbjct: 212 TLTEGGQLPPDYVLKDPDSHFIYVCEK 238


>tr|A9RCR1|A9RCR1_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_111316 PE=4 SV=1
          Length = 257

 Score = 60.8 bits (146), Expect = 4e-08
 Identities = 32/86 (37%), Positives = 49/86 (56%), Gaps = 1/86 (1%)
 Frame = -3

Query: 513 RVLKPGGVYMLITTGNPESRFPLLNTKAFGW-HVTLFIIPQPDADMDPDDRLRTYREPVQ 337
           RVLK GG+Y+LIT G+P +R P L T    W  + + + P+P +    +   R   EPV 
Sbjct: 167 RVLKVGGLYILITYGDPRTRMPWLKTPLTPWKSIIVHVFPRPGSPKALNPGPRPILEPVY 226

Query: 336 LNADGTYANNFVLENPDSLFVFVCRK 259
           +  D T    F L++PD  +++VC+K
Sbjct: 227 MLPDLTLGPQFNLDDPDWHYIYVCKK 252


>tr|A8IN22|A8IN22_CHLRE SAM-dependent methyltransferase
           OS=Chlamydomonas reinhardtii GN=CHLREDRAFT_206246 PE=4
           SV=1
          Length = 322

 Score = 56.6 bits (135), Expect = 7e-07
 Identities = 35/101 (34%), Positives = 53/101 (52%), Gaps = 15/101 (14%)
 Frame = -3

Query: 516 SRVLKPGGVYMLITTGNPESRFPLLNTKAFGWHVTLFIIPQ-PDADMDPDD--------- 367
           SRVL PGG+++LIT G P  R PL+N   FGW V + ++ + PD+   P +         
Sbjct: 128 SRVLLPGGMFLLITLGGPAHRLPLVNRPEFGWSVQVCLVRRVPDSQFAPSEPGRPIPLND 187

Query: 366 --RLRTYREPVQLNADGT---YANNFVLENPDSLFVFVCRK 259
             R  ++  P+ +NADGT     ++F  E     + + CRK
Sbjct: 188 TPRPLSFIGPLPVNADGTLDGLPDDF--EPAHYFYAYACRK 226