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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP916358
Clone id YMU001_000086_G08
Library
Length 490
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000086_G08.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
GTACCTCGTACCTGACGGATAACATACTGTACAGTTGTACTTACAAGCATACCTTTGAAC
CATGGGTTGCATACCTCTTTTGAAAGCTTGGACATATCTTGGGAACCTCCTTCATAGGCC
ATAGAACACATCTCTTGCACTGGCTTCATGCTCTCTTGCACCTCCTCTTCGAACTCACTT
ACACTGTCATCAAGCCCTTCATCATCGATTGGCCCTTCAAGGTCGCTCAACACTTCCTTC
TGTCGAGCTTCAATCTCCTACTCTTCAATCACCTCTCCTACAGTGCATCATGCTCCTCTA
AGGAAAAAAGAAACTCGTTCTCTACGGCATCCATCTCCAGTTTTTCCATAGACACGGCCG
CTTTATCTCTCTTGGCAAAAGTGTGCACATGTTGCACCACCATGGCACATTCCACCGCTA
CTTTCATCAGCACAGCCATTAGCATGGCACCACATACCACCTTCACCTGCATTTCATCAT
CTGTGGGTCT
■■Homology search results ■■ -
sp_hit_id P0C7P6
Definition sp|P0C7P6|BNP_TRIGA Bradykinin-potentiating and C-type natriuretic peptides OS=Trimeresurus gramineus
Align length 30
Score (bit) 32.0
E-value 1.6
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP916358|Adiantum capillus-veneris mRNA, clone:
YMU001_000086_G08.
         (490 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P0C7P6|BNP_TRIGA Bradykinin-potentiating and C-type natriuret...    32   1.6  
sp|P21226|CHI2_PEA Endochitinase A2 OS=Pisum sativum GN=CHI2 PE=...    31   3.4  
sp|O53304|Y3087_MYCTU UPF0089 protein Rv3087/MT3172 OS=Mycobacte...    30   4.5  
sp|Q8GVE5|TLP2_ARATH Tubby-like F-box protein 2 OS=Arabidopsis t...    30   4.5  
sp|Q8WZ75|ROBO4_HUMAN Roundabout homolog 4 OS=Homo sapiens GN=RO...    30   4.5  
sp|Q66J97|R111C_XENLA E3 ubiquitin-protein ligase arkadia-C OS=X...    30   4.5  
sp|P83799|BUBL_PENBR Bubble protein OS=Penicillium brevicompactu...    30   5.8  
sp|Q6NRV8|R111B_XENLA E3 ubiquitin-protein ligase arkadia-B OS=X...    30   5.9  
sp|Q90ZT7|R111A_XENLA E3 ubiquitin-protein ligase arkadia-A (Fra...    30   5.9  
sp|Q6LA43|APRR2_ARATH Two-component response regulator-like APRR...    30   5.9  
sp|Q2PZL6|FAT4_MOUSE Protocadherin Fat 4 OS=Mus musculus GN=Fat4...    29   9.9  

>sp|P0C7P6|BNP_TRIGA Bradykinin-potentiating and C-type natriuretic
           peptides OS=Trimeresurus gramineus PE=2 SV=1
          Length = 210

 Score = 32.0 bits (71), Expect = 1.6
 Identities = 15/30 (50%), Positives = 15/30 (50%), Gaps = 5/30 (16%)
 Frame = +1

Query: 388 HVAPPWHIPPLLSSAQPLAW-----HHIPP 462
           H  PP HIPPL     P  W     HHIPP
Sbjct: 49  HWPPPHHIPPLSVQKFPPGWKPTHPHHIPP 78


>sp|P21226|CHI2_PEA Endochitinase A2 OS=Pisum sativum GN=CHI2 PE=1
           SV=2
          Length = 324

 Score = 30.8 bits (68), Expect = 3.4
 Identities = 14/44 (31%), Positives = 20/44 (45%)
 Frame = -3

Query: 449 CHANGCADESSGGMCHGGATCAHFCQER*SGRVYGKTGDGCRRE 318
           C A  C  ++ G +C GG  C+ F      G      GDGC+ +
Sbjct: 18  CSAEQCGTQAGGALCPGGLCCSKFGW---CGSTSEYCGDGCQSQ 58


>sp|O53304|Y3087_MYCTU UPF0089 protein Rv3087/MT3172
           OS=Mycobacterium tuberculosis GN=Rv3087 PE=3 SV=1
          Length = 472

 Score = 30.4 bits (67), Expect = 4.5
 Identities = 12/19 (63%), Positives = 13/19 (68%)
 Frame = +1

Query: 391 VAPPWHIPPLLSSAQPLAW 447
           VAPPW  PPL S+ Q L W
Sbjct: 165 VAPPWEPPPLPSTRQRLGW 183


>sp|Q8GVE5|TLP2_ARATH Tubby-like F-box protein 2 OS=Arabidopsis
           thaliana GN=TULP2 PE=2 SV=1
          Length = 394

 Score = 30.4 bits (67), Expect = 4.5
 Identities = 14/39 (35%), Positives = 19/39 (48%)
 Frame = +1

Query: 370 SWQKCAHVAPPWHIPPLLSSAQPLAWHHIPPSPAFHHLW 486
           SW K +H+AP    PPL +  Q   W  +PP      +W
Sbjct: 24  SWSKSSHIAPDQTTPPLDNIPQS-PWASLPPELLHDIIW 61


>sp|Q8WZ75|ROBO4_HUMAN Roundabout homolog 4 OS=Homo sapiens GN=ROBO4
           PE=1 SV=1
          Length = 1007

 Score = 30.4 bits (67), Expect = 4.5
 Identities = 12/23 (52%), Positives = 15/23 (65%)
 Frame = +1

Query: 412 PPLLSSAQPLAWHHIPPSPAFHH 480
           P LLSS+  L   H+PP+P F H
Sbjct: 700 PKLLSSSNELVTRHLPPAPLFPH 722


>sp|Q66J97|R111C_XENLA E3 ubiquitin-protein ligase arkadia-C
           OS=Xenopus laevis GN=rnf111-C PE=2 SV=1
          Length = 967

 Score = 30.4 bits (67), Expect = 4.5
 Identities = 22/76 (28%), Positives = 33/76 (43%)
 Frame = +1

Query: 256 SYSSITSPTVHHAPLRKKETRSLRHPSPVFP*TRPLYLSWQKCAHVAPPWHIPPLLSSAQ 435
           SY+S+T P +HH       +     P P  P     Y+   +   ++P   +P L S+  
Sbjct: 621 SYTSLTRP-LHHQTSACPHSNPASQPPPPPPPPPMDYVIAHQVPFISP---LPSLTST-- 674

Query: 436 PLAWHHIPPSPAFHHL 483
               H +PP P  HHL
Sbjct: 675 ----HAVPPPPPSHHL 686


>sp|P83799|BUBL_PENBR Bubble protein OS=Penicillium brevicompactum
           PE=1 SV=1
          Length = 64

 Score = 30.0 bits (66), Expect = 5.8
 Identities = 11/26 (42%), Positives = 13/26 (50%)
 Frame = -3

Query: 464 EGGMWCHANGCADESSGGMCHGGATC 387
           +GG W     C   S  G  +GGATC
Sbjct: 39  KGGKWTEVQDCGSSSCKGTSNGGATC 64


>sp|Q6NRV8|R111B_XENLA E3 ubiquitin-protein ligase arkadia-B
           OS=Xenopus laevis GN=rnf111-B PE=2 SV=1
          Length = 959

 Score = 30.0 bits (66), Expect = 5.9
 Identities = 24/76 (31%), Positives = 32/76 (42%)
 Frame = +1

Query: 256 SYSSITSPTVHHAPLRKKETRSLRHPSPVFP*TRPLYLSWQKCAHVAPPWHIPPLLSSAQ 435
           SY+S+  P +HH       + S   P P  P   P  + +   AH  P     P L+S  
Sbjct: 610 SYTSLPRP-LHHQTSSCPHSNSASQPPPPPPPPPPPPMDYV-IAHQVPFISPLPSLTST- 666

Query: 436 PLAWHHIPPSPAFHHL 483
               H +PP P  HHL
Sbjct: 667 ----HAVPPPPPSHHL 678


>sp|Q90ZT7|R111A_XENLA E3 ubiquitin-protein ligase arkadia-A
           (Fragment) OS=Xenopus laevis GN=rnf111-A PE=2 SV=1
          Length = 923

 Score = 30.0 bits (66), Expect = 5.9
 Identities = 24/76 (31%), Positives = 32/76 (42%)
 Frame = +1

Query: 256 SYSSITSPTVHHAPLRKKETRSLRHPSPVFP*TRPLYLSWQKCAHVAPPWHIPPLLSSAQ 435
           SY+S+  P +HH       + S   P P  P   P  + +   AH  P     P L+S  
Sbjct: 574 SYTSLPRP-LHHQTSSCPHSNSASQPPPPPPPPPPPPMDYV-IAHQVPFISPLPSLTST- 630

Query: 436 PLAWHHIPPSPAFHHL 483
               H +PP P  HHL
Sbjct: 631 ----HAVPPPPPSHHL 642


>sp|Q6LA43|APRR2_ARATH Two-component response regulator-like APRR2
           OS=Arabidopsis thaliana GN=APRR2 PE=2 SV=2
          Length = 535

 Score = 30.0 bits (66), Expect = 5.9
 Identities = 13/24 (54%), Positives = 13/24 (54%)
 Frame = +1

Query: 397 PPWHIPPLLSSAQPLAWHHIPPSP 468
           PP   PPL S  QP  WH  PP P
Sbjct: 406 PPLWPPPLQSIGQPPPWHWKPPYP 429
tr_hit_id A7SS56
Definition tr|A7SS56|A7SS56_NEMVE Predicted protein (Fragment) OS=Nematostella vectensis
Align length 75
Score (bit) 36.2
E-value 0.84
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP916358|Adiantum capillus-veneris mRNA, clone:
YMU001_000086_G08.
         (490 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A7SS56|A7SS56_NEMVE Predicted protein (Fragment) OS=Nematoste...    36   0.84 
tr|Q9ZP10|Q9ZP10_CICAR Class I chitinase OS=Cicer arietinum PE=2...    35   1.9  
tr|A8N3X0|A8N3X0_COPC7 Predicted protein OS=Coprinopsis cinerea ...    33   7.1  
tr|B6MGS2|B6MGS2_BRAFL Putative uncharacterized protein (Fragmen...    33   7.2  
tr|B6K9Z9|B6K9Z9_TOXGO Putative uncharacterized protein OS=Toxop...    33   9.3  

>tr|A7SS56|A7SS56_NEMVE Predicted protein (Fragment) OS=Nematostella
           vectensis GN=v1g41061 PE=4 SV=1
          Length = 78

 Score = 36.2 bits (82), Expect = 0.84
 Identities = 26/75 (34%), Positives = 33/75 (44%)
 Frame = +1

Query: 250 SISYSSITSPTVHHAPLRKKETRSLRHPSPVFP*TRPLYLSWQKCAHVAPPWHIPPLLSS 429
           S S SS  SP  HH P     + +     P FP +   +L      H  PP H PP    
Sbjct: 6   SFSLSSSLSP-FHHLPPPPPLSSTPHQHLPTFPLSPLSHLH-----HPPPPNHHPP---- 55

Query: 430 AQPLAWHHIPPSPAF 474
             P + HH+PP P+F
Sbjct: 56  -SPSSHHHLPPPPSF 69


>tr|Q9ZP10|Q9ZP10_CICAR Class I chitinase OS=Cicer arietinum PE=2
           SV=1
          Length = 328

 Score = 35.0 bits (79), Expect = 1.9
 Identities = 15/45 (33%), Positives = 21/45 (46%)
 Frame = -3

Query: 452 WCHANGCADESSGGMCHGGATCAHFCQER*SGRVYGKTGDGCRRE 318
           WC A  C  ++ G +C GG  C+ F      G      GDGC+ +
Sbjct: 20  WCWAEQCGKQAGGALCPGGLCCSKFGW---CGSTSDYCGDGCQSQ 61


>tr|A8N3X0|A8N3X0_COPC7 Predicted protein OS=Coprinopsis cinerea
           (strain Okayama-7 / 130 / FGSC 9003) GN=CC1G_10095 PE=4
           SV=1
          Length = 367

 Score = 33.1 bits (74), Expect = 7.1
 Identities = 19/47 (40%), Positives = 24/47 (51%), Gaps = 7/47 (14%)
 Frame = +1

Query: 364 YLSWQKCAHVA--PPWHIPPLLS-----SAQPLAWHHIPPSPAFHHL 483
           Y+S +   H A  PP   PP +S     S  P+  HH+PPS   HHL
Sbjct: 191 YMSSRGSGHHAGHPPSSAPPSMSTTSSTSMDPIVGHHLPPSHHGHHL 237


>tr|B6MGS2|B6MGS2_BRAFL Putative uncharacterized protein (Fragment)
           OS=Branchiostoma floridae GN=BRAFLDRAFT_160643 PE=4 SV=1
          Length = 90

 Score = 33.1 bits (74), Expect = 7.2
 Identities = 20/56 (35%), Positives = 21/56 (37%), Gaps = 3/56 (5%)
 Frame = -3

Query: 467 GEGGMWCHANG---CADESSGGMCHGGATCAHFCQER*SGRVYGKTGDGCRRERVS 309
           G GG WC   G   C   S G    GG  C+  C  R      G  G  C R R S
Sbjct: 15  GSGGTWCSRGGYSRCCTNSRGS---GGTWCSRGCHSRCCTNSRGSGGTWCSRGRNS 67


>tr|B6K9Z9|B6K9Z9_TOXGO Putative uncharacterized protein
           OS=Toxoplasma gondii ME49 GN=TGME49_109080 PE=4 SV=1
          Length = 1477

 Score = 32.7 bits (73), Expect = 9.3
 Identities = 30/84 (35%), Positives = 37/84 (44%), Gaps = 4/84 (4%)
 Frame = +1

Query: 229 NTSFCRASISYSSITSPTVHHAPLRKKETRSLRHPSPVFP*TRPLYLSWQKCAHVAPPWH 408
           N+S C A  S  S +SP VHH P           P PV   + P   S    A  A P  
Sbjct: 733 NSSVCLAC-SVPSSSSPVVHHLP-----------PCPVLSSSSP---SPSSSAFPAAP-- 775

Query: 409 IPPLLSSAQPLAW----HHIPPSP 468
             PL SS+ P ++    HH+PP P
Sbjct: 776 SGPLSSSSVPYSFSPVVHHLPPCP 799