| Report |
 BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BP916361|Adiantum capillus-veneris mRNA, clone:
YMU001_000086_G11.
(421 letters)
Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|O49347|PSBY_ARATH Photosystem II core complex proteins psbY, ... 73 4e-13
sp|P80470|PSBY_SPIOL Photosystem II core complex proteins psbY, ... 72 1e-12
sp|Q31AA8|PSBY_PROM9 Photosystem II protein Y OS=Prochlorococcus... 35 0.12
sp|P59907|PSBY_PROMP Photosystem II protein Y OS=Prochlorococcus... 33 0.46
sp|A2BRU6|PSBY_PROMS Photosystem II protein Y OS=Prochlorococcus... 33 0.60
sp|A8G5I7|PSBY_PROM2 Photosystem II protein Y OS=Prochlorococcus... 32 0.78
sp|A2BXA4|PSBY_PROM5 Photosystem II protein Y OS=Prochlorococcus... 32 1.0
sp|Q7VQX7|SYR_BLOFL Arginyl-tRNA synthetase OS=Blochmannia flori... 31 2.3
sp|Q9KCE0|SLEB_BACHD Spore cortex-lytic enzyme OS=Bacillus halod... 30 3.0
sp|Q6LA43|APRR2_ARATH Two-component response regulator-like APRR... 30 3.0
sp|P51206|PSBY_PORPU Photosystem II protein Y OS=Porphyra purpur... 30 3.9
sp|A5GAQ4|LEXA_GEOUR LexA repressor OS=Geobacter uraniireducens ... 30 3.9
sp|Q9I387|GLSA_PSEAE Glutaminase OS=Pseudomonas aeruginosa GN=gl... 30 3.9
sp|Q02KC3|GLSA_PSEAB Glutaminase OS=Pseudomonas aeruginosa (stra... 30 3.9
sp|Q8CAI1|CC142_MOUSE Coiled-coil domain-containing protein 142 ... 30 3.9
sp|Q4L563|QOX3_STAHJ Probable quinol oxidase subunit 3 OS=Staphy... 30 5.0
sp|Q10WA3|PSBY_TRIEI Photosystem II protein Y OS=Trichodesmium e... 30 5.0
sp|Q1XDT1|PSBY_PORYE Photosystem II protein Y OS=Porphyra yezoen... 30 5.0
sp|O59786|HEMH_SCHPO Ferrochelatase, mitochondrial OS=Schizosacc... 30 5.0
sp|Q2J097|GLSA_RHOP2 Glutaminase OS=Rhodopseudomonas palustris (... 30 5.0
sp|O77700|ADA2B_BOVIN Alpha-2B adrenergic receptor (Fragment) OS... 30 5.0
sp|A4XNJ7|GLSA_PSEMY Glutaminase OS=Pseudomonas mendocina (strai... 29 6.6
sp|Q9WTS2|FUT8_MOUSE Alpha-(1,6)-fucosyltransferase OS=Mus muscu... 29 6.6
sp|Q7VD03|PSBY_PROMA Photosystem II protein Y OS=Prochlorococcus... 29 8.6
sp|P49543|PSBY_ODOSI Photosystem II protein Y OS=Odontella sinen... 29 8.6
sp|O55134|PCD12_MOUSE Protocadherin-12 OS=Mus musculus GN=Pcdh12... 29 8.6
sp|Q8IWI9|MGAP_HUMAN MAX gene-associated protein OS=Homo sapiens... 29 8.6
sp|Q13BB8|GLSA_RHOPS Glutaminase OS=Rhodopseudomonas palustris (... 29 8.6
sp|Q6N239|GLSA_RHOPA Glutaminase OS=Rhodopseudomonas palustris G... 29 8.6
sp|Q5NVB3|FUT8_PONAB Alpha-(1,6)-fucosyltransferase OS=Pongo abe... 29 8.6
>sp|O49347|PSBY_ARATH Photosystem II core complex proteins psbY,
chloroplastic OS=Arabidopsis thaliana GN=PSBY PE=2 SV=1
Length = 189
Score = 73.2 bits (178), Expect = 4e-13
Identities = 43/76 (56%), Positives = 54/76 (71%), Gaps = 2/76 (2%)
Frame = -2
Query: 420 MKTSKGIVVSLGLGA--AASGVFPGRSDAIQEMSSIAAADNDSRGILLLGVLIPAIGWVL 247
M+ SKGIVV LG+G AASG+ +A + AAA +DSRG LLL V+ PA+ WVL
Sbjct: 113 MRESKGIVVGLGIGGGLAASGLLTPPPEAYAAAEA-AAASSDSRGQLLLIVVTPALLWVL 171
Query: 246 FNILQPALNQFDKMRA 199
+NILQPALNQ +KMR+
Sbjct: 172 YNILQPALNQINKMRS 187
Score = 60.5 bits (145), Expect = 3e-09
Identities = 29/52 (55%), Positives = 42/52 (80%), Gaps = 2/52 (3%)
Frame = -2
Query: 342 AIQEMSSIAAAD--NDSRGILLLGVLIPAIGWVLFNILQPALNQFDKMRAQK 193
AIQ+++ +AAA+ +D+RG+ LL ++PAI WVL+NILQPA+NQ +KMR K
Sbjct: 66 AIQQIAQLAAANASSDNRGLALLLPIVPAIAWVLYNILQPAINQVNKMRESK 117
>sp|P80470|PSBY_SPIOL Photosystem II core complex proteins psbY,
chloroplastic OS=Spinacia oleracea GN=PSBY PE=1 SV=2
Length = 199
Score = 71.6 bits (174), Expect = 1e-12
Identities = 41/72 (56%), Positives = 50/72 (69%), Gaps = 1/72 (1%)
Frame = -2
Query: 408 KGIVVSLGL-GAAASGVFPGRSDAIQEMSSIAAADNDSRGILLLGVLIPAIGWVLFNILQ 232
K +V LGL G A SG+ +A Q S A +D+RG LLL V++PAIGWVLFNILQ
Sbjct: 129 KAFIVGLGLSGLATSGLLLATPEA-QAASEEIARGSDNRGTLLLLVVLPAIGWVLFNILQ 187
Query: 231 PALNQFDKMRAQ 196
PALNQ +KMR+Q
Sbjct: 188 PALNQLNKMRSQ 199
Score = 63.5 bits (153), Expect = 3e-10
Identities = 31/52 (59%), Positives = 42/52 (80%), Gaps = 2/52 (3%)
Frame = -2
Query: 342 AIQEMSSIAA--ADNDSRGILLLGVLIPAIGWVLFNILQPALNQFDKMRAQK 193
A+Q+++ IAA +D+RG+ LL +IPA+GWVLFNILQPALNQ +KMR +K
Sbjct: 77 AVQQLADIAAEAGTSDNRGLALLLPIIPALGWVLFNILQPALNQINKMRNEK 128
>sp|Q31AA8|PSBY_PROM9 Photosystem II protein Y OS=Prochlorococcus
marinus (strain MIT 9312) GN=psbY PE=3 SV=1
Length = 37
Score = 35.0 bits (79), Expect = 0.12
Identities = 14/35 (40%), Positives = 23/35 (65%)
Frame = -2
Query: 297 RGILLLGVLIPAIGWVLFNILQPALNQFDKMRAQK 193
R I++ +I A+ WV+FNI +PA Q+D+ +K
Sbjct: 3 RAIVVFAPIIAAVAWVVFNIQKPAREQWDRQFGEK 37
>sp|P59907|PSBY_PROMP Photosystem II protein Y OS=Prochlorococcus
marinus subsp. pastoris (strain CCMP1378 / MED4) GN=psbY
PE=3 SV=1
Length = 38
Score = 33.1 bits (74), Expect = 0.46
Identities = 13/30 (43%), Positives = 21/30 (70%)
Frame = -2
Query: 297 RGILLLGVLIPAIGWVLFNILQPALNQFDK 208
R I++ +I A+ WV+FNI +PA QF++
Sbjct: 3 RAIVVFAPIIAALAWVVFNIQKPAREQFNR 32
>sp|A2BRU6|PSBY_PROMS Photosystem II protein Y OS=Prochlorococcus
marinus (strain AS9601) GN=psbY PE=3 SV=1
Length = 38
Score = 32.7 bits (73), Expect = 0.60
Identities = 13/30 (43%), Positives = 21/30 (70%)
Frame = -2
Query: 297 RGILLLGVLIPAIGWVLFNILQPALNQFDK 208
R I++ +I A+ WV+FNI +PA QF++
Sbjct: 3 RTIVVFAPIIAALAWVIFNIQKPAREQFNR 32
>sp|A8G5I7|PSBY_PROM2 Photosystem II protein Y OS=Prochlorococcus
marinus (strain MIT 9215) GN=psbY PE=3 SV=1
Length = 38
Score = 32.3 bits (72), Expect = 0.78
Identities = 13/30 (43%), Positives = 21/30 (70%)
Frame = -2
Query: 297 RGILLLGVLIPAIGWVLFNILQPALNQFDK 208
R I++ +I A+ WV+FNI +PA QF++
Sbjct: 3 RTIVVFAPIIAALAWVVFNIQKPAREQFNR 32
>sp|A2BXA4|PSBY_PROM5 Photosystem II protein Y OS=Prochlorococcus
marinus (strain MIT 9515) GN=psbY PE=3 SV=1
Length = 39
Score = 32.0 bits (71), Expect = 1.0
Identities = 12/30 (40%), Positives = 21/30 (70%)
Frame = -2
Query: 297 RGILLLGVLIPAIGWVLFNILQPALNQFDK 208
R +++ +I A+ WV+FNI +PA QF++
Sbjct: 3 RTLVVFAPIIAALAWVIFNIQKPAREQFNR 32
>sp|Q7VQX7|SYR_BLOFL Arginyl-tRNA synthetase OS=Blochmannia
floridanus GN=argS PE=3 SV=1
Length = 583
Score = 30.8 bits (68), Expect = 2.3
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = +1
Query: 262 SRNKNTKKQNPTRIIVSSSNGGHL 333
++NKN+KK NP +I+ +GG+L
Sbjct: 294 NQNKNSKKNNPFGVIIQKKDGGYL 317
>sp|Q9KCE0|SLEB_BACHD Spore cortex-lytic enzyme OS=Bacillus
halodurans GN=sleB PE=3 SV=1
Length = 330
Score = 30.4 bits (67), Expect = 3.0
Identities = 15/49 (30%), Positives = 25/49 (51%)
Frame = +2
Query: 266 GIRTPRSKIPRESLSAAAMEDISWIASDRPGKTPEAAAPSPSDTTIPFD 412
G+R PR+ P AA ++ + +RP TPE P+P + P++
Sbjct: 144 GVRQPRADRPGRDAPAAPRDERAPRREERPAPTPE-PTPAPPEEPTPYE 191
>sp|Q6LA43|APRR2_ARATH Two-component response regulator-like APRR2
OS=Arabidopsis thaliana GN=APRR2 PE=2 SV=2
Length = 535
Score = 30.4 bits (67), Expect = 3.0
Identities = 22/68 (32%), Positives = 29/68 (42%)
Frame = +1
Query: 154 HIQKFMVHREELLLLSSHFVELIQGRLENVEEDPSNSRNKNTKKQNPTRIIVSSSNGGHL 333
H+QKF HR+ +L H IQ R E N RN N +Q ++ G
Sbjct: 343 HLQKFRQHRKNILPKDDHNHRWIQSR----ENHRPNQRNYNVFQQQHRPVMAYPVWG--- 395
Query: 334 LDSIGPPG 357
L + PPG
Sbjct: 396 LPGVYPPG 403
|
| Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BP916361|Adiantum capillus-veneris mRNA, clone:
YMU001_000086_G11.
(421 letters)
Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
tr|A9U315|A9U315_PHYPA Predicted protein (Fragment) OS=Physcomit... 81 3e-14
tr|A9SPH7|A9SPH7_PHYPA PsbY photosystem II polypeptide OS=Physco... 80 5e-14
tr|B6SR26|B6SR26_MAIZE Photosystem II core complex proteins psbY... 80 7e-14
tr|A9PJJ8|A9PJJ8_POPJC Putative uncharacterized protein OS=Popul... 79 1e-13
tr|A9PIV1|A9PIV1_POPJC Putative uncharacterized protein OS=Popul... 79 1e-13
tr|A9TFS8|A9TFS8_PHYPA Predicted protein (Fragment) OS=Physcomit... 78 2e-13
tr|A9PJ80|A9PJ80_POPJC Putative uncharacterized protein OS=Popul... 78 2e-13
tr|B6SQV2|B6SQV2_MAIZE Photosystem II core complex proteins psbY... 77 3e-13
tr|A9NZQ0|A9NZQ0_PICSI Putative uncharacterized protein OS=Picea... 77 4e-13
tr|A9PJP1|A9PJP1_POPJC Putative uncharacterized protein OS=Popul... 76 9e-13
tr|A9PJP0|A9PJP0_POPJC Putative uncharacterized protein OS=Popul... 76 9e-13
tr|A9NQA0|A9NQA0_PICSI Putative uncharacterized protein OS=Picea... 76 9e-13
tr|A9NL05|A9NL05_PICSI Putative uncharacterized protein OS=Picea... 76 9e-13
tr|Q8LAL4|Q8LAL4_ARATH Putative uncharacterized protein OS=Arabi... 73 6e-12
tr|Q6ZJ41|Q6ZJ41_ORYSJ cDNA clone:001-024-H10, full insert seque... 73 6e-12
tr|Q549N8|Q549N8_ARATH Putative uncharacterized protein OS=Arabi... 73 6e-12
tr|Q0J8C7|Q0J8C7_ORYSJ Os08g0119800 protein (Fragment) OS=Oryza ... 73 6e-12
tr|A2YQQ7|A2YQQ7_ORYSI Putative uncharacterized protein OS=Oryza... 73 6e-12
tr|A7P454|A7P454_VITVI Chromosome chr1 scaffold_5, whole genome ... 73 8e-12
tr|B7FLH1|B7FLH1_MEDTR Putative uncharacterized protein OS=Medic... 72 1e-11
tr|B6SUJ7|B6SUJ7_MAIZE Photosystem II core complex proteins psbY... 72 1e-11
tr|Q5K5A8|Q5K5A8_ORYSA PsbY-like protein OS=Oryza sativa GN=MgBP... 57 6e-07
tr|A8JKA1|A8JKA1_CHLRE Ycf32-related polyprotein of photosystem ... 55 2e-06
tr|A4S5C8|A4S5C8_OSTLU Possible psbY, PSII-Y, photosystem II pol... 55 2e-06
tr|A8I003|A8I003_CHLRE Ycf32-related subunit of photosystem II O... 54 4e-06
tr|Q00Y99|Q00Y99_OSTTA Manganese-binding protein PsbY, photosyst... 53 7e-06
tr|A9SN08|A9SN08_PHYPA Predicted protein OS=Physcomitrella paten... 33 7.0
tr|A3BSQ8|A3BSQ8_ORYSJ Putative uncharacterized protein OS=Oryza... 33 7.0
tr|B3MFZ3|B3MFZ3_DROAN GF12353 OS=Drosophila ananassae GN=GF1235... 33 7.0
tr|A3PDM2|A3PDM2_PROM0 Possible Photosystem II reaction center Y... 33 9.2
>tr|A9U315|A9U315_PHYPA Predicted protein (Fragment)
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_155209 PE=4 SV=1
Length = 137
Score = 80.9 bits (198), Expect = 3e-14
Identities = 39/73 (53%), Positives = 57/73 (78%)
Frame = -2
Query: 420 MKTSKGIVVSLGLGAAASGVFPGRSDAIQEMSSIAAADNDSRGILLLGVLIPAIGWVLFN 241
M+ +K +V GLGAAA+ + +DA QE + IA D+D+RG++++G+L+PAIGWVLFN
Sbjct: 66 MRGAKALVAGAGLGAAATLMAAPHADAAQEFAQIA--DSDARGLIIVGLLLPAIGWVLFN 123
Query: 240 ILQPALNQFDKMR 202
IL+PALNQ +KM+
Sbjct: 124 ILRPALNQIEKMQ 136
Score = 61.6 bits (148), Expect = 2e-08
Identities = 31/50 (62%), Positives = 36/50 (72%)
Frame = -2
Query: 342 AIQEMSSIAAADNDSRGILLLGVLIPAIGWVLFNILQPALNQFDKMRAQK 193
A+ +A A+ D+R + LL LIPAIGWVLFNILQPALNQ DKMR K
Sbjct: 21 AMASQQIMALAEGDNRVVALLIPLIPAIGWVLFNILQPALNQVDKMRGAK 70
>tr|A9SPH7|A9SPH7_PHYPA PsbY photosystem II polypeptide
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_166016 PE=4 SV=1
Length = 368
Score = 80.1 bits (196), Expect = 5e-14
Identities = 39/75 (52%), Positives = 57/75 (76%)
Frame = -2
Query: 420 MKTSKGIVVSLGLGAAASGVFPGRSDAIQEMSSIAAADNDSRGILLLGVLIPAIGWVLFN 241
MK +K +V GLGA A P +DA QE++ +A D+D+RG++++G+L+PA+GWVLFN
Sbjct: 125 MKAAKSLVAGAGLGALALVAAP-HADAAQEIAQVA--DSDARGLIIIGLLLPAVGWVLFN 181
Query: 240 ILQPALNQFDKMRAQ 196
IL+PALNQ +KM+ Q
Sbjct: 182 ILRPALNQIEKMQDQ 196
Score = 73.6 bits (179), Expect = 5e-12
Identities = 34/68 (50%), Positives = 56/68 (82%)
Frame = -2
Query: 408 KGIVVSLGLGAAASGVFPGRSDAIQEMSSIAAADNDSRGILLLGVLIPAIGWVLFNILQP 229
+G++ +LGLG A+ + P +DA QE++++A D+DSRG++++G+L+PA+GWVLFNIL+P
Sbjct: 206 RGVIGALGLGTASLFLAP-HADAAQEIATLA--DSDSRGLIIIGLLLPAVGWVLFNILKP 262
Query: 228 ALNQFDKM 205
ALNQ + +
Sbjct: 263 ALNQINNI 270
Score = 65.1 bits (157), Expect = 2e-09
Identities = 34/71 (47%), Positives = 48/71 (67%), Gaps = 3/71 (4%)
Frame = -2
Query: 396 VSLGLGAAASGVFPGRSDAIQEMSS---IAAADNDSRGILLLGVLIPAIGWVLFNILQPA 226
+S+G A A +F + + ++S +A A+ D+R + LL L+PAIGWVLFNIL+PA
Sbjct: 59 ISVGANALAGAMFAAMATSESALASQQIMALAEGDNRVVALLIPLVPAIGWVLFNILKPA 118
Query: 225 LNQFDKMRAQK 193
LNQ DKM+A K
Sbjct: 119 LNQVDKMKAAK 129
Score = 62.0 bits (149), Expect = 1e-08
Identities = 34/69 (49%), Positives = 50/69 (72%), Gaps = 2/69 (2%)
Frame = -2
Query: 405 GIVVSLGLGAAASGVFPG-RSDA-IQEMSSIAAADNDSRGILLLGVLIPAIGWVLFNILQ 232
G++ + G+ AAA + ++DA +QE++ + A D+R ++LL +L PAIGWVLFNIL+
Sbjct: 288 GMIGATGISAAAMSLLAAPKADAQVQEIAQLGA---DTRPLILLFILAPAIGWVLFNILK 344
Query: 231 PALNQFDKM 205
PALNQ DKM
Sbjct: 345 PALNQVDKM 353
>tr|B6SR26|B6SR26_MAIZE Photosystem II core complex proteins psbY
OS=Zea mays PE=2 SV=1
Length = 176
Score = 79.7 bits (195), Expect = 7e-14
Identities = 45/79 (56%), Positives = 62/79 (78%), Gaps = 5/79 (6%)
Frame = -2
Query: 420 MKTSKGIVVSLGLGAAASGVF--PGRSDAI-QEMSSIAAAD--NDSRGILLLGVLIPAIG 256
M++S+ + LGLGAAA+G+ P S A+ Q++++IAAA +DSRG+LLL V+ PAIG
Sbjct: 97 MRSSQAVAAGLGLGAAAAGMAAPPEASAAVVQDLAAIAAAAPADDSRGLLLLIVVAPAIG 156
Query: 255 WVLFNILQPALNQFDKMRA 199
WVLFNILQPALNQ ++MR+
Sbjct: 157 WVLFNILQPALNQLNRMRS 175
Score = 62.4 bits (150), Expect = 1e-08
Identities = 38/78 (48%), Positives = 49/78 (62%), Gaps = 4/78 (5%)
Frame = -2
Query: 414 TSKGIV---VSLGLGAAASGVFPGRSDA-IQEMSSIAAADNDSRGILLLGVLIPAIGWVL 247
TS G V V G A + V DA + ++ + A A DSRG LLL V+ PAIGWVL
Sbjct: 24 TSSGSVSLRVRTGQAAKKAAVSASSPDAALADVVAAADAGGDSRGQLLLVVVAPAIGWVL 83
Query: 246 FNILQPALNQFDKMRAQK 193
+NILQPALNQ ++MR+ +
Sbjct: 84 YNILQPALNQLNRMRSSQ 101
>tr|A9PJJ8|A9PJJ8_POPJC Putative uncharacterized protein OS=Populus
jackii PE=2 SV=1
Length = 196
Score = 79.0 bits (193), Expect = 1e-13
Identities = 42/76 (55%), Positives = 55/76 (72%), Gaps = 1/76 (1%)
Frame = -2
Query: 420 MKTSKGIVVSLGLGAAASGVFPGRSDA-IQEMSSIAAADNDSRGILLLGVLIPAIGWVLF 244
M+ +KG++V LGLG A+ F DA E++ IA A +D+RG LLL V+ PAI WVL+
Sbjct: 121 MRQTKGVIVGLGLGGLAASGFISTPDASASEIAMIAEATSDNRGTLLLIVVAPAILWVLY 180
Query: 243 NILQPALNQFDKMRAQ 196
NILQPALNQ +KMR+Q
Sbjct: 181 NILQPALNQINKMRSQ 196
Score = 59.7 bits (143), Expect = 7e-08
Identities = 32/50 (64%), Positives = 37/50 (74%)
Frame = -2
Query: 342 AIQEMSSIAAADNDSRGILLLGVLIPAIGWVLFNILQPALNQFDKMRAQK 193
A Q+++ IA DN RGI LL LIPAI WVLFNILQPALNQ ++MR K
Sbjct: 78 AAQQIAEIAEGDN--RGIALLLPLIPAIAWVLFNILQPALNQINRMRQTK 125
>tr|A9PIV1|A9PIV1_POPJC Putative uncharacterized protein OS=Populus
jackii PE=2 SV=1
Length = 196
Score = 78.6 bits (192), Expect = 1e-13
Identities = 42/76 (55%), Positives = 55/76 (72%), Gaps = 1/76 (1%)
Frame = -2
Query: 420 MKTSKGIVVSLGLGAAASGVFPGRSDA-IQEMSSIAAADNDSRGILLLGVLIPAIGWVLF 244
M+ +KG++V LGLG A+ F DA E++ IA A +D+RG LLL V+ PAI WVL+
Sbjct: 121 MRQTKGVIVGLGLGGLAASGFISTPDASASEIAMIAEAASDNRGTLLLIVVAPAILWVLY 180
Query: 243 NILQPALNQFDKMRAQ 196
NILQPALNQ +KMR+Q
Sbjct: 181 NILQPALNQINKMRSQ 196
Score = 59.7 bits (143), Expect = 7e-08
Identities = 32/50 (64%), Positives = 37/50 (74%)
Frame = -2
Query: 342 AIQEMSSIAAADNDSRGILLLGVLIPAIGWVLFNILQPALNQFDKMRAQK 193
A Q+++ IA DN RGI LL LIPAI WVLFNILQPALNQ ++MR K
Sbjct: 78 AAQQIAEIAEGDN--RGIALLLPLIPAIAWVLFNILQPALNQINRMRQTK 125
>tr|A9TFS8|A9TFS8_PHYPA Predicted protein (Fragment)
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_8237 PE=4 SV=1
Length = 130
Score = 78.2 bits (191), Expect = 2e-13
Identities = 37/73 (50%), Positives = 58/73 (79%)
Frame = -2
Query: 420 MKTSKGIVVSLGLGAAASGVFPGRSDAIQEMSSIAAADNDSRGILLLGVLIPAIGWVLFN 241
M+++K +V GLG+ A P +DA QE++ +A ++D+RG++++G+L+PAIGWVLFN
Sbjct: 60 MRSAKALVAGAGLGSLAMLAAP-HADAAQEIAQVA--ESDARGLIIIGLLLPAIGWVLFN 116
Query: 240 ILQPALNQFDKMR 202
IL+PALNQF+KM+
Sbjct: 117 ILRPALNQFEKMQ 129
Score = 60.5 bits (145), Expect = 4e-08
Identities = 29/50 (58%), Positives = 37/50 (74%)
Frame = -2
Query: 342 AIQEMSSIAAADNDSRGILLLGVLIPAIGWVLFNILQPALNQFDKMRAQK 193
A+ +A A+ D+R + LL L+PAIGWVLFNIL+PALNQ DKMR+ K
Sbjct: 15 ALASQQIMALAEGDNRVVALLIPLVPAIGWVLFNILKPALNQVDKMRSAK 64
>tr|A9PJ80|A9PJ80_POPJC Putative uncharacterized protein OS=Populus
jackii PE=2 SV=1
Length = 196
Score = 77.8 bits (190), Expect = 2e-13
Identities = 42/76 (55%), Positives = 55/76 (72%), Gaps = 1/76 (1%)
Frame = -2
Query: 420 MKTSKGIVVSLGLGA-AASGVFPGRSDAIQEMSSIAAADNDSRGILLLGVLIPAIGWVLF 244
M+ +KG++V LGLG AASG + E++ IA A +D+RG LLL V+ PAI WVL+
Sbjct: 121 MRQTKGVIVGLGLGGLAASGFISTPHASASEIAMIADATSDNRGTLLLIVVAPAILWVLY 180
Query: 243 NILQPALNQFDKMRAQ 196
NILQPALNQ +KMR+Q
Sbjct: 181 NILQPALNQINKMRSQ 196
Score = 58.9 bits (141), Expect = 1e-07
Identities = 31/50 (62%), Positives = 37/50 (74%)
Frame = -2
Query: 342 AIQEMSSIAAADNDSRGILLLGVLIPAIGWVLFNILQPALNQFDKMRAQK 193
A Q+++ IA DN RG+ LL LIPAI WVLFNILQPALNQ ++MR K
Sbjct: 78 AAQQIAEIAEGDN--RGLALLLPLIPAIAWVLFNILQPALNQINRMRQTK 125
>tr|B6SQV2|B6SQV2_MAIZE Photosystem II core complex proteins psbY
OS=Zea mays PE=2 SV=1
Length = 191
Score = 77.4 bits (189), Expect = 3e-13
Identities = 42/80 (52%), Positives = 59/80 (73%), Gaps = 6/80 (7%)
Frame = -2
Query: 420 MKTSKGIVVSLGLGAAASGVFPGRSDA----IQEMSSIAAAD--NDSRGILLLGVLIPAI 259
M++S+ + LGLGAAA+ +A +Q++++IAAA +DSRG+LLL V+ PAI
Sbjct: 111 MRSSQAVAAGLGLGAAAAAGMAAPPEASAAVVQDLAAIAAAAPADDSRGLLLLIVVAPAI 170
Query: 258 GWVLFNILQPALNQFDKMRA 199
GWVLFNILQPALNQ ++MR+
Sbjct: 171 GWVLFNILQPALNQLNRMRS 190
Score = 61.6 bits (148), Expect = 2e-08
Identities = 35/79 (44%), Positives = 50/79 (63%), Gaps = 4/79 (5%)
Frame = -2
Query: 417 KTSKGIVVSLGLGAAASGVFPGR--SDAIQEMSSIAAAD--NDSRGILLLGVLIPAIGWV 250
+ +K +S+ + +G F S ++ +AAAD DSRG LLL V+ PAIGWV
Sbjct: 37 QAAKKAALSVSASSTLAGAFLAALASSPDAALADVAAADAGGDSRGQLLLVVVAPAIGWV 96
Query: 249 LFNILQPALNQFDKMRAQK 193
L+NILQPALNQ ++MR+ +
Sbjct: 97 LYNILQPALNQLNRMRSSQ 115
>tr|A9NZQ0|A9NZQ0_PICSI Putative uncharacterized protein OS=Picea
sitchensis PE=2 SV=1
Length = 207
Score = 77.0 bits (188), Expect = 4e-13
Identities = 44/76 (57%), Positives = 54/76 (71%), Gaps = 5/76 (6%)
Frame = -2
Query: 405 GIVVSLGLGAAASGVF---PGRSDAIQEMSSIAA--ADNDSRGILLLGVLIPAIGWVLFN 241
G+V GLGAA F P + A Q + +AA A+ND+RG+LLL V+IPAIGWVLFN
Sbjct: 132 GLVAFAGLGAAGGAAFLSNPEEAHAEQLVFDLAAKAANNDNRGLLLLIVVIPAIGWVLFN 191
Query: 240 ILQPALNQFDKMRAQK 193
ILQPALNQ +KMR+ K
Sbjct: 192 ILQPALNQINKMRSGK 207
Score = 58.9 bits (141), Expect = 1e-07
Identities = 30/61 (49%), Positives = 38/61 (62%)
Frame = -2
Query: 384 LGAAASGVFPGRSDAIQEMSSIAAADNDSRGILLLGVLIPAIGWVLFNILQPALNQFDKM 205
+GAA G A + A +DSRG LLL L+PAI WVL+NILQPALNQ ++M
Sbjct: 69 MGAALIGALSSCDSAAAAQEVMELAASDSRGTLLLLPLVPAIAWVLYNILQPALNQINRM 128
Query: 204 R 202
+
Sbjct: 129 K 129
>tr|A9PJP1|A9PJP1_POPJC Putative uncharacterized protein OS=Populus
jackii PE=2 SV=1
Length = 192
Score = 75.9 bits (185), Expect = 9e-13
Identities = 39/75 (52%), Positives = 54/75 (72%), Gaps = 1/75 (1%)
Frame = -2
Query: 420 MKTSKGIVVSLGLGAAASGVFPGRSDA-IQEMSSIAAADNDSRGILLLGVLIPAIGWVLF 244
M+ ++G+++ LGLG A+ F DA E++ IA A +DSRG LLL V+ PAI WVL+
Sbjct: 118 MRETRGVIIGLGLGGLAASGFMSTPDASASEIAMIAEATSDSRGTLLLLVVAPAILWVLY 177
Query: 243 NILQPALNQFDKMRA 199
NILQPALNQ ++MR+
Sbjct: 178 NILQPALNQINRMRS 192
Score = 56.6 bits (135), Expect = 6e-07
Identities = 37/82 (45%), Positives = 47/82 (57%), Gaps = 12/82 (14%)
Frame = -2
Query: 411 SKGIVVS-------LGLGAAASGVFPGRSD-----AIQEMSSIAAADNDSRGILLLGVLI 268
+KG+ +S L A A +F S A Q+++ IA DN RG+ LL LI
Sbjct: 40 TKGLTISKPADNTALAGTAIAGAIFTALSSSEPAFAAQQIAEIAEGDN--RGLALLLPLI 97
Query: 267 PAIGWVLFNILQPALNQFDKMR 202
PAI WVLFNILQP LNQ ++MR
Sbjct: 98 PAIAWVLFNILQPTLNQVNRMR 119
|