BP916370
Clone id YMU001_000087_A01
Library
Length 363
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000087_A01.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
AATCAATGCCAATCCTTGCAGAGCAGCTTTGATGTCATAGCATTACATGAGCGTTACAAA
TTGCACTACAAATCATTTAGGTATCTACATAGAAATACTGCCGAGCTACCAAGATTTACA
TGCCCCACAAAGGGAGGATCTTCAAATAGTTACATCCATAAAATATATTTCATGTCCCTG
ATGTTGTAGCAAAAAGCACAGCCAGATCCACGGCATCCATAACAAAAGCAATCCATGCCA
TTCCATGTGATCTGCCACACACTAAGTGAAGCATACAGCTCTCAAAGGCCAAAATGCAAA
AAGTAGTCTCCAAATAACTTATCCACATTAACGTGGTGAGTTATGGACAACCTTCATTCC
AAA
■■Homology search results ■■ -
sp_hit_id Q39575
Definition sp|Q39575|DYHG_CHLRE Dynein gamma chain, flagellar outer arm OS=Chlamydomonas reinhardtii
Align length 28
Score (bit) 29.3
E-value 6.4
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP916370|Adiantum capillus-veneris mRNA, clone:
YMU001_000087_A01.
(363 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q39575|DYHG_CHLRE Dynein gamma chain, flagellar outer arm OS=... 29 6.4
sp|Q1G9C7|SYFA_LACDA Phenylalanyl-tRNA synthetase alpha chain OS... 29 8.4
sp|O36635|L_HRSVB Large structural protein OS=Human respiratory ... 29 8.4
sp|Q69XV9|EXP16_ORYSJ Expansin-A16 OS=Oryza sativa subsp. japoni... 29 8.4

>sp|Q39575|DYHG_CHLRE Dynein gamma chain, flagellar outer arm
OS=Chlamydomonas reinhardtii GN=ODA2 PE=1 SV=1
Length = 4485

Score = 29.3 bits (64), Expect = 6.4
Identities = 14/28 (50%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
Frame = +1

Query: 43 LHERYKLHYKSFR-YLHRNTAELPRFTC 123
LHE+ ++ KS YL + AE PRFTC
Sbjct: 1532 LHEQLEMCQKSLSAYLEQKRAEFPRFTC 1559


>sp|Q1G9C7|SYFA_LACDA Phenylalanyl-tRNA synthetase alpha chain
OS=Lactobacillus delbrueckii subsp. bulgaricus (strain
ATCC 11842 / DSM 20081) GN=pheS PE=3 SV=1
Length = 349

Score = 28.9 bits (63), Expect = 8.4
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = -2

Query: 236 MDCFCYGCRGSGCAFCYN 183
MD C+ C G GCA C N
Sbjct: 264 MDVSCFECGGKGCAICKN 281


>sp|O36635|L_HRSVB Large structural protein OS=Human respiratory
syncytial virus B (strain B1) GN=L PE=3 SV=1
Length = 2166

Score = 28.9 bits (63), Expect = 8.4
Identities = 16/45 (35%), Positives = 26/45 (57%)
Frame = +2

Query: 44 YMSVTNCTTNHLGIYIEILPSYQDLHAPQREDLQIVTSIKYISCP 178
Y S+ T N L I + L Y++ H P++ DL+++ + K IS P
Sbjct: 502 YPSLLEITENDL-IILSGLRFYREFHLPKKVDLEMIINDKAISPP 545


>sp|Q69XV9|EXP16_ORYSJ Expansin-A16 OS=Oryza sativa subsp. japonica
GN=EXPA16 PE=2 SV=1
Length = 260

Score = 28.9 bits (63), Expect = 8.4
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = -2

Query: 212 RGSGCAFCYNIRDMKYILW 156
RGS C CY +R + ++LW
Sbjct: 79 RGSACGGCYEVRCVNHVLW 97


tr_hit_id Q7Q4K3
Definition tr|Q7Q4K3|Q7Q4K3_ANOGA AGAP008436-PA OS=Anopheles gambiae
Align length 37
Score (bit) 33.5
E-value 5.5
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP916370|Adiantum capillus-veneris mRNA, clone:
YMU001_000087_A01.
(363 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q7Q4K3|Q7Q4K3_ANOGA AGAP008436-PA OS=Anopheles gambiae GN=AGA... 33 5.5
tr|B6QVR1|B6QVR1_PENMA Inorganic diphosphatase, putative OS=Peni... 33 9.3

>tr|Q7Q4K3|Q7Q4K3_ANOGA AGAP008436-PA OS=Anopheles gambiae
GN=AGAP008436 PE=3 SV=3
Length = 1407

Score = 33.5 bits (75), Expect = 5.5
Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = -1

Query: 303 LFAFWPLRAVCFT*CVA-DHMEWHGLLLLWMPWIWLC 196
LF FW LR + + VA D EW+ + L + + WLC
Sbjct: 100 LFTFWTLRTLALSMDVAFDRTEWYDFMHLMLAFAWLC 136


>tr|B6QVR1|B6QVR1_PENMA Inorganic diphosphatase, putative
OS=Penicillium marneffei ATCC 18224 GN=PMAA_013300 PE=4
SV=1
Length = 488

Score = 32.7 bits (73), Expect = 9.3
Identities = 14/28 (50%), Positives = 16/28 (57%)
Frame = +1

Query: 244 HVICHTLSEAYSSQRPKCKK*SPNNLST 327
HV C LSE + S RPKC P N +T
Sbjct: 18 HVTCPHLSERFVSNRPKCSTSKPRNFTT 45