BP916373 |
Clone id |
YMU001_000087_A04 |
Library |
YMU01 |
Length |
508 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000087_A04. |
Accession |
BP916373 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
ATCTTCTGACAGCTTAAGTGGTTCTCCGCCGGTGGATTGTCATGCACTGGCCAGCTGCTC AGAACCTGAGAATATGAATTTTGGAGAGTGGGAAAATCTTAGAGAAATTCAAAAAGATGA AGCTCAGCTGCTATCTTGTGGCAATCAGCTTAGAACTAATTATCACTCGTCAAACGGGGA GCCAGCAGTGCTCCAAGAACATTACAATATTAGGGGAACTGCAAAGAGTCATACTAATAC CAAACGGAAAATATATACCCGGAGGGAAAGAAGAGGTACCAGTAACCAGATATTTAATGG GGTCAGTTTCCTACTTACGGGATTTTCTGCCAGTCAAAAGAAGATAGTGGAAGATCTCTC TAAGAAAGTTCAAGAGCATGGTGGAGTCATCATGTCAAGTATCCCTAGTTTATCAAGTCT AAATGGACAGAGGAGACTCCTGAAGCAGCATACAACTTCACATTCTATTGTGTTAGCGCC ACAAAAGGTCCTCTTGGCTTTCGCTGGG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q5ZLK2 |
Definition |
sp|Q5ZLK2|UBX2B_CHICK UBX domain-containing protein 2B OS=Gallus gallus |
Align length |
97 |
Score (bit) |
32.7 |
E-value |
1.0 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q7XZG4 |
Definition |
tr|Q7XZG4|Q7XZG4_ORYSJ Putative uncharacterized protein OSJNBb0033J23.7 OS=Oryza sativa subsp. japonica |
Align length |
79 |
Score (bit) |
45.1 |
E-value |
0.002 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP916373|Adiantum capillus-veneris mRNA, clone: YMU001_000087_A04. (508 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q7XZG4|Q7XZG4_ORYSJ Putative uncharacterized protein OSJNBb00... 45 0.002 tr|Q6ATS1|Q6ATS1_ORYSJ Os03g0811200 protein OS=Oryza sativa subs... 45 0.002 tr|A3ANY0|A3ANY0_ORYSJ Putative uncharacterized protein OS=Oryza... 45 0.002 tr|B8AMB9|B8AMB9_ORYSI Putative uncharacterized protein OS=Oryza... 45 0.003 tr|A7QME7|A7QME7_VITVI Chromosome undetermined scaffold_125, who... 44 0.005 tr|Q6C437|Q6C437_YARLI YALI0E29997p OS=Yarrowia lipolytica GN=YA... 37 0.55 tr|A7BKK8|A7BKK8_9GAMM WD-40 repeat protein OS=Beggiatoa sp. SS ... 35 2.1 tr|Q6ILZ8|Q6ILZ8_DROME HDC07888 OS=Drosophila melanogaster GN=HD... 35 2.1 tr|B3L0G0|B3L0G0_PLAKH Replication factor C subunit 1, putative ... 35 2.1 tr|Q5CFV7|Q5CFV7_CRYHO Transmembrane protein OS=Cryptosporidium ... 35 2.7 tr|Q1PWG1|Q1PWG1_9BACT Putative uncharacterized protein OS=Candi... 34 3.6 tr|Q7YY16|Q7YY16_CRYPV Putative uncharacterized protein OS=Crypt... 34 3.6 tr|Q5CXF5|Q5CXF5_CRYPV Putative uncharacterized protein OS=Crypt... 34 3.6 tr|Q22NY8|Q22NY8_TETTH Putative uncharacterized protein OS=Tetra... 34 3.6 tr|B3M6K9|B3M6K9_DROAN GF24896 OS=Drosophila ananassae GN=GF2489... 34 3.6 tr|Q8D6K1|Q8D6K1_VIBVU Methyl-accepting chemotaxis protein OS=Vi... 34 4.7 tr|Q7NBE3|Q7NBE3_MYCGA Putative uncharacterized protein OS=Mycop... 34 4.7 tr|Q7MDF9|Q7MDF9_VIBVY Methyl-accepting chemotaxis protein OS=Vi... 34 4.7 tr|A5FNA2|A5FNA2_FLAJ1 FAD dependent oxidoreductase OS=Flavobact... 34 4.7 tr|B4NFN6|B4NFN6_DROWI GK22674 OS=Drosophila willistoni GN=GK226... 34 4.7 tr|A2FD36|A2FD36_TRIVA Viral A-type inclusion protein, putative ... 34 4.7 tr|B2AWA2|B2AWA2_PODAN Predicted CDS Pa_7_6470 OS=Podospora anse... 34 4.7 tr|A7TEV9|A7TEV9_VANPO Putative uncharacterized protein OS=Vande... 33 6.1 tr|Q7RG53|Q7RG53_PLAYO Replication factor C, 140 kDa subunit OS=... 33 8.0 tr|Q22SB2|Q22SB2_TETTH ABC transporter family protein OS=Tetrahy... 33 8.0 tr|B2AA04|B2AA04_PODAN Predicted CDS Pa_1_2390 (Fragment) OS=Pod... 33 8.0 tr|A3LP57|A3LP57_PICST DNA ATP-dependent helicase OS=Pichia stip... 33 8.0
>tr|Q7XZG4|Q7XZG4_ORYSJ Putative uncharacterized protein OSJNBb0033J23.7 OS=Oryza sativa subsp. japonica GN=OSJNBb0033J23.7 PE=4 SV=1 Length = 850
Score = 45.1 bits (105), Expect = 0.002 Identities = 27/79 (34%), Positives = 46/79 (58%) Frame = +2
Query: 263 RERRGTSNQIFNGVSFLLTGFSASQKKIVEDLSKKVQEHGGVIMSSIPSLSSLNGQRRLL 442 RE +F+G+ FLLTGF + ++K +E L +++ GG ++S +PS L+ + +L Sbjct: 598 REYIDNKEALFHGLDFLLTGFQSHKEKEIEPL---IRKFGGYVLSRVPS-CPLDKRSKLA 653
Query: 443 KQHTTSHSIVLAPQKVLLA 499 + IVL+P+KV A Sbjct: 654 ELARCKPPIVLSPKKVSTA 672
>tr|Q6ATS1|Q6ATS1_ORYSJ Os03g0811200 protein OS=Oryza sativa subsp. japonica GN=OSJNBa0028F23.1 PE=4 SV=1 Length = 883
Score = 45.1 bits (105), Expect = 0.002 Identities = 27/79 (34%), Positives = 46/79 (58%) Frame = +2
Query: 263 RERRGTSNQIFNGVSFLLTGFSASQKKIVEDLSKKVQEHGGVIMSSIPSLSSLNGQRRLL 442 RE +F+G+ FLLTGF + ++K +E L +++ GG ++S +PS L+ + +L Sbjct: 631 REYIDNKEALFHGLDFLLTGFQSHKEKEIEPL---IRKFGGYVLSRVPS-CPLDKRSKLA 686
Query: 443 KQHTTSHSIVLAPQKVLLA 499 + IVL+P+KV A Sbjct: 687 ELARCKPPIVLSPKKVSTA 705
>tr|A3ANY0|A3ANY0_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_012502 PE=4 SV=1 Length = 863
Score = 45.1 bits (105), Expect = 0.002 Identities = 27/79 (34%), Positives = 46/79 (58%) Frame = +2
Query: 263 RERRGTSNQIFNGVSFLLTGFSASQKKIVEDLSKKVQEHGGVIMSSIPSLSSLNGQRRLL 442 RE +F+G+ FLLTGF + ++K +E L +++ GG ++S +PS L+ + +L Sbjct: 598 REYIDNKEALFHGLDFLLTGFQSHKEKEIEPL---IRKFGGYVLSRVPS-CPLDKRSKLA 653
Query: 443 KQHTTSHSIVLAPQKVLLA 499 + IVL+P+KV A Sbjct: 654 ELARCKPPIVLSPKKVSTA 672
>tr|B8AMB9|B8AMB9_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_14021 PE=4 SV=1 Length = 883
Score = 44.7 bits (104), Expect = 0.003 Identities = 27/79 (34%), Positives = 46/79 (58%) Frame = +2
Query: 263 RERRGTSNQIFNGVSFLLTGFSASQKKIVEDLSKKVQEHGGVIMSSIPSLSSLNGQRRLL 442 RE +F+G+ FLLTGF + ++K +E L +++ GG ++S +PS L+ + +L Sbjct: 631 REYIDNKEALFHGLDFLLTGFQSHKEKEIEPL---IRKFGGYVLSRVPS-CPLDKRSKLA 686
Query: 443 KQHTTSHSIVLAPQKVLLA 499 + IVL+P+KV A Sbjct: 687 ELARCKPLIVLSPKKVSTA 705
>tr|A7QME7|A7QME7_VITVI Chromosome undetermined scaffold_125, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00002037001 PE=4 SV=1 Length = 693
Score = 43.9 bits (102), Expect = 0.005 Identities = 26/68 (38%), Positives = 42/68 (61%), Gaps = 1/68 (1%) Frame = +2
Query: 290 IFNGVSFLLTGFSASQKKIVEDLSKKVQEHGGVIMSSIPSLSSLNGQRRLLKQHTTSH-S 466 IF G+ FLLTGFS+ ++K +E L ++++GG+++ IPS S N +R+ H Sbjct: 451 IFQGLEFLLTGFSSCKEKEIEGL---IRKYGGIVLPDIPSPS--NSRRKRNSNFNQKHLP 505
Query: 467 IVLAPQKV 490 IVL +K+ Sbjct: 506 IVLCSKKL 513
>tr|Q6C437|Q6C437_YARLI YALI0E29997p OS=Yarrowia lipolytica GN=YALI0E29997g PE=4 SV=1 Length = 674
Score = 37.0 bits (84), Expect = 0.55 Identities = 20/58 (34%), Positives = 35/58 (60%) Frame = +2
Query: 326 SASQKKIVEDLSKKVQEHGGVIMSSIPSLSSLNGQRRLLKQHTTSHSIVLAPQKVLLA 499 S +++ +EDL+ V+ G + S +L+S + ++KQ +H I+LA Q+VLLA Sbjct: 136 SQDKEEEIEDLADNVRNLQGQMASLKKTLASKERETSIVKQQNQAHKILLAKQEVLLA 193
>tr|A7BKK8|A7BKK8_9GAMM WD-40 repeat protein OS=Beggiatoa sp. SS GN=BGS_0124 PE=4 SV=1 Length = 222
Score = 35.0 bits (79), Expect = 2.1 Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 2/49 (4%) Frame = +2
Query: 41 HALASCSEPENMNFGEWENLREIQK--DEAQLLSCGNQLRTNYHSSNGE 181 H + S S + + F EW++ +E K D+ QLL G QL NY +N + Sbjct: 163 HEIISASADKTVRFWEWQHFKEKAKSDDQTQLLDKGCQLLKNYLENNNK 211
>tr|Q6ILZ8|Q6ILZ8_DROME HDC07888 OS=Drosophila melanogaster GN=HDC07888 PE=4 SV=1 Length = 194
Score = 35.0 bits (79), Expect = 2.1 Identities = 28/102 (27%), Positives = 47/102 (46%), Gaps = 7/102 (6%) Frame = +2
Query: 92 ENLREIQKDEAQLLSCGNQLRTNYHSS-------NGEPAVLQEHYNIRGTAKSHTNTKRK 250 ++L + ++ L CG QL+ YH S N P VL NI+ + T + R Sbjct: 90 QSLGARSRSRSKKLGCGAQLKYVYHQSERHGYLYNLLPTVLG---NIKNSLTGSTQSHRP 146
Query: 251 IYTRRERRGTSNQIFNGVSFLLTGFSASQKKIVEDLSKKVQE 376 + R E +G+ F+ +SF + +K +E L+ K +E Sbjct: 147 VERRMEAKGSCCSFFDFLSFRKRVEKDNSRKSLELLAYKDEE 188
>tr|B3L0G0|B3L0G0_PLAKH Replication factor C subunit 1, putative OS=Plasmodium knowlesi (strain H) GN=PKH_040080 PE=4 SV=1 Length = 900
Score = 35.0 bits (79), Expect = 2.1 Identities = 22/85 (25%), Positives = 39/85 (45%), Gaps = 3/85 (3%) Frame = +2
Query: 164 HSSNGEPAVLQEHYNIRG---TAKSHTNTKRKIYTRRERRGTSNQIFNGVSFLLTGFSAS 334 H++ G A + N G T K + T + F+ + F+LTG + Sbjct: 146 HTTTGGKAKEESDLNNSGGNITKKKNDTTSTSTINANKNNNFDYLPFHSLKFVLTGVFKN 205
Query: 335 QKKIVEDLSKKVQEHGGVIMSSIPS 409 + ++L K++EHGG +MS++ S Sbjct: 206 FSR--DELQSKIKEHGGNVMSAVSS 228
>tr|Q5CFV7|Q5CFV7_CRYHO Transmembrane protein OS=Cryptosporidium hominis GN=Chro.60162 PE=4 SV=1 Length = 608
Score = 34.7 bits (78), Expect = 2.7 Identities = 19/59 (32%), Positives = 38/59 (64%), Gaps = 1/59 (1%) Frame = +2
Query: 227 SHTNTKRKIYTRRERRGTSNQI-FNGVSFLLTGFSASQKKIVEDLSKKVQEHGGVIMSS 400 S+T +K+ I+ GTSN+I ++G+S + G +S+ + +E+LS ++ +HG + +S Sbjct: 225 SNTISKKSIFNFNNINGTSNEINYHGLSTIHEGSESSEAEEIENLS-EIDKHGSKLRNS 282
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