BP916375 |
Clone id |
YMU001_000087_A06 |
Library |
YMU01 |
Length |
539 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000087_A06. |
Accession |
BP916375 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
ATTGCTTTGGCCCTTTGCTCCATAGAACTTCTACTGTGAAGGTGTGTTGTTGTTTGTCTG CTCCGTAACTCTCTTTGACAATTCTTCCAGCAACAATACGTTTGCCCACTCCAGCCGGCA TGCGGCTTGTACCTGCATTACAGTACTTCCTTTTCACTTTCTGCTTAAATAGAACAATAT CCCCTGTACATGCATCTCCAGTACAATCTATCGTAAATGTTGATCTGGGATACTTAGCCA CCCCACCATGGGCTTTCAACTCAATGTGCTCTTTGACACGATCAGCCAGAACTGATTTTG AGCCTGCCAGTCTCAATGAGTAACGTCGCAAATAGGCTTTGCAATGCTCCAATTTCAGAT TCTCCAGATCTCCCTCCCTTATAATGCTTAAAGCTTCACAAAAAAGTTTCTGATCTTCTT TGCTTAAAGTTGTCTTGCATCCTGCATGTCCGCCTCCCTTTGTCCATTCGTGTTTCTCTC TAGTCCATTTTTTTCCGAGTTGAGTTGAGTTGGCACCTCTGATCCCATTGGTTGCTCTC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q338N2 |
Definition |
sp|Q338N2|C3H62_ORYSJ Zinc finger CCCH domain-containing protein 62 OS=Oryza sativa subsp. japonica |
Align length |
141 |
Score (bit) |
134.0 |
E-value |
3.0e-31 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q8L6U6 |
Definition |
tr|Q8L6U6|Q8L6U6_CRAPL Transcription factor R18 OS=Craterostigma plantagineum |
Align length |
141 |
Score (bit) |
158.0 |
E-value |
2.0e-37 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP916375|Adiantum capillus-veneris mRNA, clone: YMU001_000087_A06. (539 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q8L6U6|Q8L6U6_CRAPL Transcription factor R18 OS=Craterostigma... 158 2e-37 tr|A7P6E8|A7P6E8_VITVI Chromosome chr9 scaffold_7, whole genome ... 150 4e-35 tr|A5BS47|A5BS47_VITVI Putative uncharacterized protein OS=Vitis... 147 5e-34 tr|A9U1Q1|A9U1Q1_PHYPA Predicted protein OS=Physcomitrella paten... 144 4e-33 tr|A7QYD6|A7QYD6_VITVI Chromosome undetermined scaffold_245, who... 142 1e-32 tr|B8BGM9|B8BGM9_ORYSI Putative uncharacterized protein OS=Oryza... 134 3e-30 tr|Q9FKZ6|Q9FKZ6_ARATH Arabidopsis thaliana genomic DNA, chromos... 132 1e-29 tr|Q0D4L3|Q0D4L3_ORYSJ Os07g0619700 protein OS=Oryza sativa subs... 116 9e-25 tr|B8B8L8|B8B8L8_ORYSI Putative uncharacterized protein OS=Oryza... 116 9e-25 tr|Q8L414|Q8L414_ORYSJ Transcription factor R18-like protein OS=... 105 2e-21 tr|A3BM95|A3BM95_ORYSJ Putative uncharacterized protein OS=Oryza... 105 2e-21 tr|A8JB15|A8JB15_CHLRE DNA binding protein OS=Chlamydomonas rein... 45 0.002 tr|A3DCF9|A3DCF9_CLOTH Putative uncharacterized protein OS=Clost... 36 1.5 tr|Q9M212|Q9M212_ARATH Putative uncharacterized protein T8B10_13... 35 2.5 tr|A5AUF8|A5AUF8_VITVI Putative uncharacterized protein OS=Vitis... 35 2.5 tr|A0MF36|A0MF36_ARATH Putative uncharacterized protein (Fragmen... 35 2.5 tr|A8IIK4|A8IIK4_CHLRE Chloroplast stem-loop-binding protein OS=... 34 4.3 tr|Q2LC36|Q2LC36_HUMAN Neuregulin-3-like polypeptide OS=Homo sap... 34 4.3 tr|B0X1B2|B0X1B2_CULQU Putative uncharacterized protein OS=Culex... 34 5.6 tr|A9GBB8|A9GBB8_9RHOB Putative uncharacterized protein OS=Phaeo... 33 7.3 tr|A9EX63|A9EX63_9RHOB Putative uncharacterized protein OS=Phaeo... 33 7.3 tr|Q6Y683|Q6Y683_CHLRE 41 kDa ribosome-associated protein OS=Chl... 33 7.3 tr|A7UVM7|A7UVM7_ANOGA AGAP001472-PA (Fragment) OS=Anopheles gam... 33 7.3 tr|A7TT99|A7TT99_VANPO Putative uncharacterized protein OS=Vande... 33 9.5
>tr|Q8L6U6|Q8L6U6_CRAPL Transcription factor R18 OS=Craterostigma plantagineum GN=r18 PE=4 SV=1 Length = 434
Score = 158 bits (400), Expect = 2e-37 Identities = 76/141 (53%), Positives = 100/141 (70%) Frame = -2
Query: 427 LSKEDQKLFCEALSIIREGDLENLKLEHCKAYLRRYSLRLAGSKSVLADRVKEHIELKAH 248 LSKEDQK + L+++ G +E+LK++ CK YLR++ LRL G+K+ L R+KEH + Sbjct: 74 LSKEDQKCYETILTMVEGGQVESLKVDQCKIYLRKHKLRLTGNKATLIQRIKEHTCIVNG 133
Query: 247 GGVAKYPRSTFTIDCTGDACTGDIVLFKQKVKRKYCNAGTSRMPAGVGKRIVAGRIVKES 68 GG KYP S+F ++C GDAC GD+V+F+Q V + A S GKR+VAGRI+KES Sbjct: 134 GGEKKYPVSSFVLNCKGDACLGDVVMFEQNVYEMFNLASRSAAGPPCGKRLVAGRIIKES 193
Query: 67 YGADKQQHTFTVEVLWSKGPK 5 YGA KQQHTFT+EVLWSKG K Sbjct: 194 YGAAKQQHTFTIEVLWSKGEK 214
>tr|A7P6E8|A7P6E8_VITVI Chromosome chr9 scaffold_7, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00034038001 PE=4 SV=1 Length = 438
Score = 150 bits (379), Expect = 4e-35 Identities = 73/141 (51%), Positives = 94/141 (66%) Frame = -2
Query: 427 LSKEDQKLFCEALSIIREGDLENLKLEHCKAYLRRYSLRLAGSKSVLADRVKEHIELKAH 248 L ++D+K F +I G LE LK++ CK YLR+ LRL G+K L R+KEH+ + Sbjct: 82 LDEKDEKSFEMVQKMIEAGQLEKLKVDQCKVYLRKNGLRLTGNKETLIQRIKEHLGIING 141
Query: 247 GGVAKYPRSTFTIDCTGDACTGDIVLFKQKVKRKYCNAGTSRMPAGVGKRIVAGRIVKES 68 GG KYP S+F ++C GDACTGD+V+F+Q V + A S G RI+AG IVK+S Sbjct: 142 GGEKKYPVSSFVLNCKGDACTGDVVMFEQNVYEMFNIASRSASGPPCGSRIIAGHIVKDS 201
Query: 67 YGADKQQHTFTVEVLWSKGPK 5 YGA KQQHTFT+EVLWSKG K Sbjct: 202 YGAAKQQHTFTIEVLWSKGEK 222
>tr|A5BS47|A5BS47_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_044432 PE=4 SV=1 Length = 486
Score = 147 bits (370), Expect = 5e-34 Identities = 74/139 (53%), Positives = 98/139 (70%), Gaps = 4/139 (2%) Frame = -2
Query: 406 LFC---EALSIIREG-DLENLKLEHCKAYLRRYSLRLAGSKSVLADRVKEHIELKAHGGV 239 +FC A++++ EG D++ LKL+ CK YLR++ LR+ G+K V +R+KEH +K G Sbjct: 97 IFCIRNSAVNLVSEGSDIKELKLKECKVYLRKHGLRITGTKEVCIERIKEHWRIKDGNGE 156
Query: 238 AKYPRSTFTIDCTGDACTGDIVLFKQKVKRKYCNAGTSRMPAGVGKRIVAGRIVKESYGA 59 YP+S+F ++CTGD C GD+VLF QKV K+ R +GKR +AGRIVKESYGA Sbjct: 157 VLYPKSSFFVNCTGDVCKGDVVLFTQKVYAKFDK--VKRNGKLLGKRTIAGRIVKESYGA 214
Query: 58 DKQQHTFTVEVLWSKGPKQ 2 KQQHTFTVEVLWSKG K+ Sbjct: 215 AKQQHTFTVEVLWSKGIKK 233
>tr|A9U1Q1|A9U1Q1_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_173184 PE=4 SV=1 Length = 644
Score = 144 bits (362), Expect = 4e-33 Identities = 82/170 (48%), Positives = 102/170 (60%), Gaps = 18/170 (10%) Frame = -2
Query: 460 KGGGHAGCKTTLSKEDQKLFCEALSIIREG-DLENLKLEHCKAYLRRYSLRLAGSKSVLA 284 + GG LS ED LF E + +I+EG DL+ K+EH KAYLR Y LR+ G K++L Sbjct: 247 ESGGEQELIAPLSHEDAGLFAEVMKVIKEGSDLKKPKVEHLKAYLRNYGLRMVGVKAILL 306
Query: 283 DRVKEHIELKAHGGVAKYPRSTFTIDCTGDACTGDIVLFKQK----------VKRKYCN- 137 RV+EH+ +K G YPRS+FTI+C GD C GDIVLF Q V Y + Sbjct: 307 SRVQEHLRIKDGQGEDIYPRSSFTINCKGDVCLGDIVLFLQNVYDISLGKVLVASNYISW 366
Query: 136 ------AGTSRMPAGVGKRIVAGRIVKESYGADKQQHTFTVEVLWSKGPK 5 G S P +GKR VAG++V ESYGA KQQHTFT+EVLWS G + Sbjct: 367 PFAIQRRGASGPP--LGKRWVAGKVVNESYGAAKQQHTFTIEVLWSTGTR 414
>tr|A7QYD6|A7QYD6_VITVI Chromosome undetermined scaffold_245, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00009691001 PE=4 SV=1 Length = 217
Score = 142 bits (358), Expect = 1e-32 Identities = 69/123 (56%), Positives = 88/123 (71%) Frame = -2
Query: 370 DLENLKLEHCKAYLRRYSLRLAGSKSVLADRVKEHIELKAHGGVAKYPRSTFTIDCTGDA 191 D++ LKL+ CK YLR++ LR+ G+K V +R+KEH +K G YP+S+F ++CTGD Sbjct: 12 DIKELKLKECKVYLRKHGLRITGTKEVCIERIKEHWRIKDGNGEVLYPKSSFFVNCTGDV 71
Query: 190 CTGDIVLFKQKVKRKYCNAGTSRMPAGVGKRIVAGRIVKESYGADKQQHTFTVEVLWSKG 11 C GD+VLF QKV K+ R +GKR +AGRIVKESYGA KQQHTFTVEVLWSKG Sbjct: 72 CKGDVVLFTQKVYAKFDK--VKRNGKLLGKRTIAGRIVKESYGAAKQQHTFTVEVLWSKG 129
Query: 10 PKQ 2 K+ Sbjct: 130 IKK 132
>tr|B8BGM9|B8BGM9_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_33425 PE=4 SV=1 Length = 702
Score = 134 bits (337), Expect = 3e-30 Identities = 66/141 (46%), Positives = 93/141 (65%) Frame = -2
Query: 427 LSKEDQKLFCEALSIIREGDLENLKLEHCKAYLRRYSLRLAGSKSVLADRVKEHIELKAH 248 + KE+ L ++ +G LE LK+ CKAYLR + LRL+G+K VL R++ IE+K Sbjct: 112 MGKEEMDLLAMVDKLMHDGQLEKLKVYECKAYLRMHKLRLSGNKEVLLTRIRGQIEVKTM 171
Query: 247 GGVAKYPRSTFTIDCTGDACTGDIVLFKQKVKRKYCNAGTSRMPAGVGKRIVAGRIVKES 68 G V KYP S+F ++C GD+C GD+V+F+Q + ++ A G+R AGRI+KES Sbjct: 172 GEV-KYPVSSFVLNCQGDSCKGDVVVFEQNIYKRKKGAPRGVKGHLCGQRTNAGRIIKES 230
Query: 67 YGADKQQHTFTVEVLWSKGPK 5 YG KQQHTFT+E+LWS+G K Sbjct: 231 YGTKKQQHTFTIEILWSRGYK 251
>tr|Q9FKZ6|Q9FKZ6_ARATH Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MUD21 OS=Arabidopsis thaliana GN=At5g66840 PE=4 SV=1 Length = 551
Score = 132 bits (332), Expect = 1e-29 Identities = 64/123 (52%), Positives = 87/123 (70%) Frame = -2
Query: 370 DLENLKLEHCKAYLRRYSLRLAGSKSVLADRVKEHIELKAHGGVAKYPRSTFTIDCTGDA 191 DL+++ ++ CKAYLR++ LRL+G+K V DR+ EH +K G A YP+S+F I+C GD Sbjct: 89 DLKSVNVKECKAYLRKHGLRLSGTKPVCIDRILEHWRIKDGTGEAVYPKSSFAINCKGDV 148
Query: 190 CTGDIVLFKQKVKRKYCNAGTSRMPAGVGKRIVAGRIVKESYGADKQQHTFTVEVLWSKG 11 C GDIVLF QKV KY + +G+R VAG++VKESYG KQQHTFT+EVLW +G Sbjct: 149 CKGDIVLFTQKVHHKY--EKMKKSGNIMGRRTVAGQVVKESYGTAKQQHTFTIEVLWCEG 206
Query: 10 PKQ 2 ++ Sbjct: 207 TQK 209
>tr|Q0D4L3|Q0D4L3_ORYSJ Os07g0619700 protein OS=Oryza sativa subsp. japonica GN=Os07g0619700 PE=4 SV=1 Length = 529
Score = 116 bits (290), Expect = 9e-25 Identities = 60/126 (47%), Positives = 78/126 (61%), Gaps = 1/126 (0%) Frame = -2
Query: 385 IIREG-DLENLKLEHCKAYLRRYSLRLAGSKSVLADRVKEHIELKAHGGVAKYPRSTFTI 209 ++R G +L+ +KL CKAYL++ L G + +R+ H K YPRS+F I Sbjct: 103 LLRAGRNLDGIKLVDCKAYLKKNGLSQTGDLATCIERIVLHWRFKDRDPEKIYPRSSFCI 162
Query: 208 DCTGDACTGDIVLFKQKVKRKYCNAGTSRMPAGVGKRIVAGRIVKESYGADKQQHTFTVE 29 +C GD C GD VLFKQKV K R +GKRIVAG ++KESYG +KQQHTFT++ Sbjct: 163 NCKGDVCRGDTVLFKQKVYEK----SGKRHSKCIGKRIVAGSVIKESYGKEKQQHTFTIQ 218
Query: 28 VLWSKG 11 V WSKG Sbjct: 219 VFWSKG 224
>tr|B8B8L8|B8B8L8_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_26895 PE=4 SV=1 Length = 529
Score = 116 bits (290), Expect = 9e-25 Identities = 60/126 (47%), Positives = 78/126 (61%), Gaps = 1/126 (0%) Frame = -2
Query: 385 IIREG-DLENLKLEHCKAYLRRYSLRLAGSKSVLADRVKEHIELKAHGGVAKYPRSTFTI 209 ++R G +L+ +KL CKAYL++ L G + +R+ H K YPRS+F I Sbjct: 103 LLRAGRNLDGIKLVDCKAYLKKNGLSQTGDLATCIERIVLHWRFKDRDPEKIYPRSSFCI 162
Query: 208 DCTGDACTGDIVLFKQKVKRKYCNAGTSRMPAGVGKRIVAGRIVKESYGADKQQHTFTVE 29 +C GD C GD VLFKQKV K R +GKRIVAG ++KESYG +KQQHTFT++ Sbjct: 163 NCKGDVCRGDTVLFKQKVYEK----SGKRHSKCIGKRIVAGSVIKESYGKEKQQHTFTIQ 218
Query: 28 VLWSKG 11 V WSKG Sbjct: 219 VFWSKG 224
>tr|Q8L414|Q8L414_ORYSJ Transcription factor R18-like protein OS=Oryza sativa subsp. japonica GN=P0560B08.121 PE=4 SV=1 Length = 547
Score = 105 bits (261), Expect = 2e-21 Identities = 60/144 (41%), Positives = 78/144 (54%), Gaps = 19/144 (13%) Frame = -2
Query: 385 IIREG-DLENLKLEHCKAYLRRYSLRLAGSKSVLADRVKEHIELKAHGGVAKYPRSTFTI 209 ++R G +L+ +KL CKAYL++ L G + +R+ H K YPRS+F I Sbjct: 103 LLRAGRNLDGIKLVDCKAYLKKNGLSQTGDLATCIERIVLHWRFKDRDPEKIYPRSSFCI 162
Query: 208 DCTG------------------DACTGDIVLFKQKVKRKYCNAGTSRMPAGVGKRIVAGR 83 +C G D C GD VLFKQKV K R +GKRIVAG Sbjct: 163 NCKGATSVGNKPLSVCIRNYPGDVCRGDTVLFKQKVYEK----SGKRHSKCIGKRIVAGS 218
Query: 82 IVKESYGADKQQHTFTVEVLWSKG 11 ++KESYG +KQQHTFT++V WSKG Sbjct: 219 VIKESYGKEKQQHTFTIQVFWSKG 242
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