NBDC - アーカイブトップ - ヘルプ
データベースの説明 | データ項目の説明 | ダウンロード | 利用許諾 | ヘルプ
AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
Description of this DB | Description of data items | Download | License
AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP916376
Clone id YMU001_000087_A07
Library
Length 490
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000087_A07.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
TTCACTGACTCACTCCTCGAGGAATCGATGGAAGCAGAGTGCGCAGCTTCCGCCTTCTCT
TTGGCAGCTGAGAACCTCCTCTTGTGTACTGCCTCTGCTTCTTCTAGTAGTTTATCAATA
GATGTGTTGCAATTCTGGAAGGACATTCTTCCCAGTAACGCCCCTGGTTTTGGATCTCCT
TCCAGAATAACAGTACATCTTTTTCCAGCGGCCCGGGCAATGGCAGGCACAACCCAGTGA
CCTTCATCAGCAACGGTTGCGTCTTCTTCTGCTTTTTTTGCAACTTCTTCCCTTTGCTTT
GCTCTTTGCATAAACTGTCAAAGAAGCCAATTAGGTTCAAACCACAACTGCTCCTCAATC
AATGTCGCGTTTAATGTGAACAAGAGGTTGCAGAAGCAGCCCATCCTAAAAATTCTACAT
CCCCCTGCATCTTTACCCGCTCTGCCACATACTTCAGGTGCTGCAAGCCATTCGAGTACT
CGCGTTTCGC
■■Homology search results ■■ -
sp_hit_id Q99547
Definition sp|Q99547|MPH6_HUMAN M-phase phosphoprotein 6 OS=Homo sapiens
Align length 94
Score (bit) 38.5
E-value 0.016
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP916376|Adiantum capillus-veneris mRNA, clone:
YMU001_000087_A07.
         (490 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q99547|MPH6_HUMAN M-phase phosphoprotein 6 OS=Homo sapiens GN...    39   0.016
sp|Q9D1Q1|MPH6_MOUSE M-phase phosphoprotein 6 OS=Mus musculus GN...    32   1.5  
sp|Q5UPH7|YL107_MIMIV Putative BTB/POZ domain-containing protein...    31   2.7  
sp|P83399|THGC1_VIGUN Cp-thionin-1 OS=Vigna unguiculata PE=1 SV=1      30   7.6  
sp|Q9VXT5|C19L2_DROME CWF19-like protein 2 homolog OS=Drosophila...    30   7.6  
sp|Q2NE10|ILVD_METST Dihydroxy-acid dehydratase OS=Methanosphaer...    29   9.9  

>sp|Q99547|MPH6_HUMAN M-phase phosphoprotein 6 OS=Homo sapiens
           GN=MPHOSPH6 PE=1 SV=1
          Length = 160

 Score = 38.5 bits (88), Expect = 0.016
 Identities = 28/94 (29%), Positives = 41/94 (43%), Gaps = 2/94 (2%)
 Frame = -3

Query: 356 EEQLWFEPNWLL*QFMQRAKQREEVAKKAEEDATVADEGHWVVPAIARAAGKRCTVILEG 177
           E +     N L  +FMQR    E   +  EE+  +  E HW +  +     K   +I E 
Sbjct: 4   ERKTKLSKNLLRMKFMQRGLDSETKKQLEEEEKKIISEEHWYLD-LPELKEKESFIIEEQ 62

Query: 176 DPK--PGALLGRMSFQNCNTSIDKLLEEAEAVHK 81
                   L GRMSF+  N  ++KL+ +  A HK
Sbjct: 63  SFLLCEDLLYGRMSFRGFNPEVEKLMLQMNAKHK 96


>sp|Q9D1Q1|MPH6_MOUSE M-phase phosphoprotein 6 OS=Mus musculus
           GN=Mphosph6 PE=2 SV=1
          Length = 161

 Score = 32.0 bits (71), Expect = 1.5
 Identities = 23/86 (26%), Positives = 37/86 (43%), Gaps = 2/86 (2%)
 Frame = -3

Query: 356 EEQLWFEPNWLL*QFMQRAKQREEVAKKAEEDATVADEGHWVVPAIARAAGKRCTVILEG 177
           E +     N L  +FMQR    E   +  EE+  +  + HW +  +     K   ++ E 
Sbjct: 4   ERKTKLSKNLLRMKFMQRGLDSETKKQLEEEERKMISDEHWYLD-LPELKEKESFIVEEQ 62

Query: 176 DPK--PGALLGRMSFQNCNTSIDKLL 105
                   L GRMSF+  N  ++KL+
Sbjct: 63  SFSLCEDLLYGRMSFRGFNPEVEKLM 88


>sp|Q5UPH7|YL107_MIMIV Putative BTB/POZ domain-containing protein
           L107 OS=Acanthamoeba polyphaga mimivirus GN=MIMI_L107
           PE=3 SV=1
          Length = 501

 Score = 31.2 bits (69), Expect = 2.7
 Identities = 16/34 (47%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
 Frame = +1

Query: 298 FALCINCQRSQLGSNHNCSSIN-VAFNVNKRLQK 396
           F LCI+  R +L +NH+C SI  V  N N +L K
Sbjct: 173 FILCIDSDRIELHNNHSCFSIGPVKLNYNCKLYK 206


>sp|P83399|THGC1_VIGUN Cp-thionin-1 OS=Vigna unguiculata PE=1 SV=1
          Length = 47

 Score = 29.6 bits (65), Expect = 7.6
 Identities = 12/23 (52%), Positives = 12/23 (52%)
 Frame = -3

Query: 452 VCGRAGKDAGGCRIFRMGCFCNL 384
           VC   G   G CR FR  CFC L
Sbjct: 23  VCRNEGFSGGNCRGFRRRCFCTL 45


>sp|Q9VXT5|C19L2_DROME CWF19-like protein 2 homolog OS=Drosophila
           melanogaster GN=CG9213 PE=1 SV=2
          Length = 687

 Score = 29.6 bits (65), Expect = 7.6
 Identities = 12/37 (32%), Positives = 22/37 (59%)
 Frame = -3

Query: 311 MQRAKQREEVAKKAEEDATVADEGHWVVPAIARAAGK 201
           +Q+AK+R E+  + E    +  E  W++PA+A+   K
Sbjct: 27  LQQAKERAELRGQRERQKELRGEADWMLPALAKKLEK 63


>sp|Q2NE10|ILVD_METST Dihydroxy-acid dehydratase OS=Methanosphaera
           stadtmanae (strain DSM 3091) GN=ilvD PE=3 SV=1
          Length = 549

 Score = 29.3 bits (64), Expect = 9.9
 Identities = 13/30 (43%), Positives = 20/30 (66%)
 Frame = -3

Query: 221 IARAAGKRCTVILEGDPKPGALLGRMSFQN 132
           IARA+ K+   +LE D KP  +L + +F+N
Sbjct: 227 IARASAKKIFTLLENDIKPSDILTQEAFEN 256
tr_hit_id A9TB75
Definition tr|A9TB75|A9TB75_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens
Align length 79
Score (bit) 87.4
E-value 3.0e-16
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP916376|Adiantum capillus-veneris mRNA, clone:
YMU001_000087_A07.
         (490 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9TB75|A9TB75_PHYPA Predicted protein OS=Physcomitrella paten...    87   3e-16
tr|A9NP18|A9NP18_PICSI Putative uncharacterized protein OS=Picea...    75   2e-12
tr|Q38JJ1|Q38JJ1_SOLTU Putative uncharacterized protein OS=Solan...    73   8e-12
tr|A7NYX7|A7NYX7_VITVI Chromosome chr6 scaffold_3, whole genome ...    68   2e-10
tr|B8AD83|B8AD83_ORYSI Putative uncharacterized protein OS=Oryza...    64   5e-09
tr|B6TZI4|B6TZI4_MAIZE Putative uncharacterized protein OS=Zea m...    62   1e-08
tr|Q9LTI4|Q9LTI4_ARATH Genomic DNA, chromosome 5, BAC clone:F2O1...    62   1e-08
tr|Q8LD59|Q8LD59_ARATH Putative uncharacterized protein OS=Arabi...    61   2e-08
tr|Q5ZBL4|Q5ZBL4_ORYSJ cDNA clone:006-309-E03, full insert seque...    61   2e-08
tr|B6LWH1|B6LWH1_BRAFL Putative uncharacterized protein OS=Branc...    45   0.002
tr|B6P8Y3|B6P8Y3_BRAFL Putative uncharacterized protein OS=Branc...    44   0.004
tr|Q53HB4|Q53HB4_HUMAN M-phase phosphoprotein 6 variant (Fragmen...    39   0.17 
tr|Q6DDD4|Q6DDD4_XENTR LOC447969 protein (Fragment) OS=Xenopus t...    37   0.50 
tr|Q28IZ6|Q28IZ6_XENTR M-phase phosphoprotein 6 OS=Xenopus tropi...    37   0.50 
tr|B1WAT9|B1WAT9_XENTR M-phase phosphoprotein 6 OS=Xenopus tropi...    37   0.50 
tr|Q2NLB2|Q2NLB2_XENLA MGC130899 protein OS=Xenopus laevis GN=MG...    35   2.5  
tr|B5XE73|B5XE73_SALSA M-phase phosphoprotein 6 OS=Salmo salar G...    35   2.5  
tr|B5XB22|B5XB22_SALSA M-phase phosphoprotein 6 OS=Salmo salar G...    35   2.5  
tr|Q2TBI9|Q2TBI9_BOVIN M-phase phosphoprotein 6 OS=Bos taurus GN...    34   3.2  
tr|Q6DBY4|Q6DBY4_DANRE Zgc:100960 OS=Danio rerio GN=zgc:100960 P...    34   4.2  
tr|A2SNS8|A2SNS8_METPP Precorrin-6Y C5,15-methyltransferase (Dec...    34   4.2  
tr|B0CPJ5|B0CPJ5_LACBS Predicted protein OS=Laccaria bicolor (st...    34   4.2  
tr|A7SGT0|A7SGT0_NEMVE Predicted protein OS=Nematostella vectens...    33   5.5  
tr|Q9KE87|Q9KE87_BACHD SNF2 helicase OS=Bacillus halodurans GN=B...    33   7.2  
tr|A7S8I9|A7S8I9_NEMVE Predicted protein OS=Nematostella vectens...    33   9.3  
tr|A8NI86|A8NI86_COPC7 Predicted protein OS=Coprinopsis cinerea ...    33   9.3  

>tr|A9TB75|A9TB75_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_90482 PE=4 SV=1
          Length = 376

 Score = 87.4 bits (215), Expect = 3e-16
 Identities = 43/79 (54%), Positives = 56/79 (70%), Gaps = 3/79 (3%)
 Frame = -3

Query: 317 QFMQRAKQREEVAKKAEEDAT---VADEGHWVVPAIARAAGKRCTVILEGDPKPGALLGR 147
           +FMQRAK RE+  K+ E +A      D+ HWV PA   A+  RC VI EGDPKPGA++GR
Sbjct: 19  RFMQRAKIREDELKRQEAEAAGSAAVDDSHWVTPA---ASASRCKVIFEGDPKPGAIIGR 75

Query: 146 MSFQNCNTSIDKLLEEAEA 90
           MSFQ+ N S+D+++EE EA
Sbjct: 76  MSFQSFNPSVDRIVEEVEA 94


>tr|A9NP18|A9NP18_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 180

 Score = 74.7 bits (182), Expect = 2e-12
 Identities = 37/77 (48%), Positives = 52/77 (67%), Gaps = 1/77 (1%)
 Frame = -3

Query: 314 FMQRAKQREEVAKKAEEDATVADE-GHWVVPAIARAAGKRCTVILEGDPKPGALLGRMSF 138
           FMQR++Q+EE  KK E++  ++ + G+W           +C VI+EGDP PGA++GRMSF
Sbjct: 12  FMQRSRQKEESVKKEEQEQVISPKSGNW-----------KCVVIMEGDPTPGAVIGRMSF 60

Query: 137 QNCNTSIDKLLEEAEAV 87
           QN N SIDKL +E E +
Sbjct: 61  QNFNPSIDKLSDEVEDI 77


>tr|Q38JJ1|Q38JJ1_SOLTU Putative uncharacterized protein OS=Solanum
           tuberosum PE=2 SV=1
          Length = 186

 Score = 72.8 bits (177), Expect = 8e-12
 Identities = 41/74 (55%), Positives = 50/74 (67%)
 Frame = -3

Query: 317 QFMQRAKQREEVAKKAEEDATVADEGHWVVPAIARAAGKRCTVILEGDPKPGALLGRMSF 138
           +FMQRA  REE  KK EE   V  +G++     + +A KRC +I+EGDP PGA+ GRMSF
Sbjct: 14  KFMQRASLREEKPKKEEE---VVPDGNFP----SSSAPKRCVIIMEGDPHPGAIKGRMSF 66

Query: 137 QNCNTSIDKLLEEA 96
           Q  N SIDKL EEA
Sbjct: 67  QGFNPSIDKLSEEA 80


>tr|A7NYX7|A7NYX7_VITVI Chromosome chr6 scaffold_3, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00024292001
           PE=4 SV=1
          Length = 186

 Score = 68.2 bits (165), Expect = 2e-10
 Identities = 38/74 (51%), Positives = 49/74 (66%)
 Frame = -3

Query: 317 QFMQRAKQREEVAKKAEEDATVADEGHWVVPAIARAAGKRCTVILEGDPKPGALLGRMSF 138
           +FMQRA Q+EE +KK EE   V  E ++  P   +   ++C VI+EGDP PGA  GRMSF
Sbjct: 14  KFMQRANQKEEKSKKEEE---VKPEDNFFSPNTVK---RKCVVIVEGDPHPGATKGRMSF 67

Query: 137 QNCNTSIDKLLEEA 96
           QN N +IDKL + A
Sbjct: 68  QNFNPAIDKLNDAA 81


>tr|B8AD83|B8AD83_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_00363 PE=4 SV=1
          Length = 199

 Score = 63.5 bits (153), Expect = 5e-09
 Identities = 37/84 (44%), Positives = 52/84 (61%), Gaps = 5/84 (5%)
 Frame = -3

Query: 317 QFMQRAKQREEVAKKAEEDATVADEGHWV-VPAIARAAG----KRCTVILEGDPKPGALL 153
           +FMQRA   ++V +K + +A  A+E   V VP+    +     ++C VI+EG+P PGA  
Sbjct: 15  KFMQRAAVAQKVEEKPKVEAAAAEEEEVVTVPSGGVGSSVKVTRKCVVIMEGNPHPGAAK 74

Query: 152 GRMSFQNCNTSIDKLLEEAEAVHK 81
           GRMSF N N SIDKL +EA   H+
Sbjct: 75  GRMSFLNFNPSIDKLTQEATGGHQ 98


>tr|B6TZI4|B6TZI4_MAIZE Putative uncharacterized protein OS=Zea mays
           PE=2 SV=1
          Length = 191

 Score = 62.4 bits (150), Expect = 1e-08
 Identities = 36/78 (46%), Positives = 50/78 (64%), Gaps = 4/78 (5%)
 Frame = -3

Query: 317 QFMQRAKQREEVAKKAEEDATVADEGHWVVPAIARAAG----KRCTVILEGDPKPGALLG 150
           +FMQR    ++  +KAE +  V +E   + P+   A+     ++C VI+EG+P PGA+ G
Sbjct: 15  KFMQRGAAAQKAEEKAEVE--VQEEAVVMAPSGGFASSAQVVRKCIVIMEGNPHPGAIKG 72

Query: 149 RMSFQNCNTSIDKLLEEA 96
           RMSFQN N SIDKL EEA
Sbjct: 73  RMSFQNFNPSIDKLNEEA 90


>tr|Q9LTI4|Q9LTI4_ARATH Genomic DNA, chromosome 5, BAC clone:F2O15
           (At5g59460) OS=Arabidopsis thaliana GN=At5g59460 PE=2
           SV=1
          Length = 172

 Score = 62.0 bits (149), Expect = 1e-08
 Identities = 37/74 (50%), Positives = 50/74 (67%)
 Frame = -3

Query: 317 QFMQRAKQREEVAKKAEEDATVADEGHWVVPAIARAAGKRCTVILEGDPKPGALLGRMSF 138
           +FMQR+  + E  KKA+E+     E +   P++ R   K+C VI + DP+PGALLGRMSF
Sbjct: 14  KFMQRSSLKVE-KKKADEE-----EPNGSFPSL-RTVAKKCVVITDWDPQPGALLGRMSF 66

Query: 137 QNCNTSIDKLLEEA 96
           Q+ N SI+KL EEA
Sbjct: 67  QSFNPSIEKLHEEA 80


>tr|Q8LD59|Q8LD59_ARATH Putative uncharacterized protein
           OS=Arabidopsis thaliana PE=2 SV=1
          Length = 172

 Score = 61.2 bits (147), Expect = 2e-08
 Identities = 37/74 (50%), Positives = 50/74 (67%)
 Frame = -3

Query: 317 QFMQRAKQREEVAKKAEEDATVADEGHWVVPAIARAAGKRCTVILEGDPKPGALLGRMSF 138
           +FMQR+  + E  KKA+E+     E +   P++   A K+C VI + DP+PGALLGRMSF
Sbjct: 14  KFMQRSSLKVE-KKKADEE-----EPNGSFPSLGTVA-KKCVVITDWDPQPGALLGRMSF 66

Query: 137 QNCNTSIDKLLEEA 96
           Q+ N SI+KL EEA
Sbjct: 67  QSFNPSIEKLHEEA 80


>tr|Q5ZBL4|Q5ZBL4_ORYSJ cDNA clone:006-309-E03, full insert sequence
           OS=Oryza sativa subsp. japonica GN=P0024G09.35 PE=2 SV=1
          Length = 200

 Score = 61.2 bits (147), Expect = 2e-08
 Identities = 35/80 (43%), Positives = 47/80 (58%), Gaps = 6/80 (7%)
 Frame = -3

Query: 317 QFMQRAKQREEVAKKAEEDATVADEGHWVVPAIARAAG------KRCTVILEGDPKPGAL 156
           +FMQRA   ++V +K + +A  A     VV   +   G      ++C VI+EG+P PGA 
Sbjct: 15  KFMQRAAVAQKVEEKPKVEAAAAAAEEEVVTVPSGGVGSSVKVARKCVVIMEGNPHPGAA 74

Query: 155 LGRMSFQNCNTSIDKLLEEA 96
            GRMSF N N SIDKL +EA
Sbjct: 75  KGRMSFLNFNPSIDKLTQEA 94


>tr|B6LWH1|B6LWH1_BRAFL Putative uncharacterized protein
           OS=Branchiostoma floridae GN=BRAFLDRAFT_214287 PE=4 SV=1
          Length = 156

 Score = 44.7 bits (104), Expect = 0.002
 Identities = 28/75 (37%), Positives = 38/75 (50%)
 Frame = -3

Query: 317 QFMQRAKQREEVAKKAEEDATVADEGHWVVPAIARAAGKRCTVILEGDPKPGALLGRMSF 138
           +FMQR +Q ++  K  EE+  V DE HWV+  I         VI    P  G   GR SF
Sbjct: 18  KFMQRKQQSDDREKLEEEEQRVIDEEHWVLD-IPELKKLEYEVIDSFVPCEGLKYGRFSF 76

Query: 137 QNCNTSIDKLLEEAE 93
           Q  N +I+K+ +  E
Sbjct: 77  QGFNPAIEKIAKSFE 91