BP916405 |
Clone id |
YMU001_000087_C12 |
Library |
YMU01 |
Length |
504 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000087_C12. |
Accession |
BP916405 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
AAGAATCAGATTTTATGTGCCTTGCTGGCTTGATGTGAAGAAGATCCACCTGTTTATTGT AATTTTGTAGAGCCTAAAGACAAGAATAGGTTGCATGTGCATCTAGATTCAAAAGCAACC TCAAACATAAAGATCTTAGAAATAGTGCAGCCTGAGGAAATGGATGGCCAATTCACCATG TTGTCCAATTTCAATATAGAGAAGATGGGTATTTTTGTTGCACTAGCTGAAACATGTTTT CCAGATCCCACATCACTCGCTCCTCTCAGCCAGGCGGATGAGTCTGTTGAATTGAGAGCT CTAAATGAGACAGGATCAAGGTGTTACAAGATTTTGGCTTCGACCAAATTGTGTCCATAT CAAGGCATTCCGACAAAGATTTTGCTACTACGTCCATACACTACATATACAAATCGATTG GGTGAACCACTATGGTTAAGTCAAACCCCTTCTGACGAGCCAAAGACTTTAGCACCTTCT GATTGGAGAGTTAATTTTCCACTG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q4L4K7 |
Definition |
sp|Q4L4K7|ENO_STAHJ Enolase OS=Staphylococcus haemolyticus (strain JCSC1435) |
Align length |
45 |
Score (bit) |
31.6 |
E-value |
2.2 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9TGH0 |
Definition |
tr|A9TGH0|A9TGH0_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
154 |
Score (bit) |
86.3 |
E-value |
7.0e-18 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP916405|Adiantum capillus-veneris mRNA, clone: YMU001_000087_C12. (504 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9TGH0|A9TGH0_PHYPA Predicted protein OS=Physcomitrella paten... 86 7e-18 tr|A5B5J1|A5B5J1_VITVI Putative uncharacterized protein OS=Vitis... 89 2e-16 tr|B8BIA4|B8BIA4_ORYSI Putative uncharacterized protein OS=Oryza... 85 2e-15 tr|A3C7E5|A3C7E5_ORYSJ Putative uncharacterized protein OS=Oryza... 85 2e-15 tr|A9RMV8|A9RMV8_PHYPA Predicted protein OS=Physcomitrella paten... 71 7e-13 tr|A7PCH1|A7PCH1_VITVI Chromosome chr2 scaffold_11, whole genome... 52 2e-05 tr|O23557|O23557_ARATH Putative uncharacterized protein dl4595c ... 45 0.002 tr|A7AWL4|A7AWL4_BABBO Putative uncharacterized protein OS=Babes... 36 0.92 tr|A9TTH3|A9TTH3_PHYPA Predicted protein OS=Physcomitrella paten... 35 2.7 tr|A8XV81|A8XV81_CAEBR Putative uncharacterized protein OS=Caeno... 34 3.5 tr|A2WHG1|A2WHG1_9BURK Molecular chaperone OS=Burkholderia dolos... 34 4.6 tr|Q9SS88|Q9SS88_ARATH F4P13.21 protein OS=Arabidopsis thaliana ... 34 4.6 tr|Q93XX2|Q93XX2_ARATH Putative uncharacterized protein At3g0167... 34 4.6 tr|A5BPK2|A5BPK2_VITVI Putative uncharacterized protein OS=Vitis... 34 4.6 tr|Q10WW3|Q10WW3_TRIEI Toll-Interleukin receptor OS=Trichodesmiu... 33 7.8
>tr|A9TGH0|A9TGH0_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_169946 PE=4 SV=1 Length = 4890
Score = 86.3 bits (212), Expect(2) = 7e-18 Identities = 57/154 (37%), Positives = 79/154 (51%), Gaps = 3/154 (1%) Frame = +1
Query: 46 PPVYCNFVEPKDKNRLHVHLDSKATSNIKILEIVQPEEMDGQFTMLSNFNIEKMGIFVAL 225 PP+ C V R D S I EI + E+M MLSN++ + MG+ VAL Sbjct: 3762 PPMKCKLVGAAHLGRKKFKSDKSRVSKKHIQEIDE-EDMHQFPRMLSNYDSKVMGLAVAL 3820
Query: 226 A---ETCFPDPTSLAPLSQADESVELRALNETGSRCYKILASTKLCPYQGIPTKILLLRP 396 + T F + L PL +V+LR + + ++ L +T L PY T+++ LRP Sbjct: 3821 SGSESTAFGPVSPLQPLEDPIGNVDLRVADNQNLQ-FRFLVTTTLHPYGFAQTQVVRLRP 3879
Query: 397 YTTYTNRLGEPLWLSQTPSDEPKTLAPSDWRVNF 498 YT +TNRLG PL L Q +D+ TL P DWR F Sbjct: 3880 YTLFTNRLGRPLELRQAGTDQSVTLHPWDWRTTF 3913
Score = 27.3 bits (59), Expect(2) = 7e-18 Identities = 9/10 (90%), Positives = 10/10 (100%) Frame = +2
Query: 5 IRFYVPCWLD 34 I+FYVPCWLD Sbjct: 3748 IQFYVPCWLD 3757
>tr|A5B5J1|A5B5J1_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_019380 PE=4 SV=1 Length = 1063
Score = 88.6 bits (218), Expect = 2e-16 Identities = 49/142 (34%), Positives = 84/142 (59%), Gaps = 3/142 (2%) Frame = +1
Query: 82 KNRLHVHLDSKATSNIKILEIVQPEEMDGQFTMLSNFNIEKMGIFVALAETC---FPDPT 252 K+ L H SK + + EI + E +G +T+ S N + +G+ V++ ++ F Sbjct: 578 KSSLPFH--SKKNNEVIFEEITEEEIFEG-YTIASALNFKLLGLSVSITQSGAEQFGPVQ 634
Query: 253 SLAPLSQADESVELRALNETGSRCYKILASTKLCPYQGIPTKILLLRPYTTYTNRLGEPL 432 L+PL D S++L A + G +C ++ S+K C YQ +PTK++ +RP+ T+TNRLGE + Sbjct: 635 DLSPLGDTDASLDLNAYDVDG-KCMRLFISSKPCLYQSVPTKVINIRPFMTFTNRLGEDI 693
Query: 433 WLSQTPSDEPKTLAPSDWRVNF 498 ++ + D+PK L P+D R+ F Sbjct: 694 FIKFSSEDDPKMLHPTDSRIPF 715
>tr|B8BIA4|B8BIA4_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_34684 PE=4 SV=1 Length = 4102
Score = 85.1 bits (209), Expect = 2e-15 Identities = 53/160 (33%), Positives = 83/160 (51%), Gaps = 9/160 (5%) Frame = +1
Query: 46 PPVYCNFVE---PKDKNRLHVHLDSKATSNIKILEIVQPEEMDGQFTMLSNFNIEKMGIF 216 PP+ ++ KDK R S+ + KIL + EE+ +T+ S N + +G+ Sbjct: 3005 PPINLQLIDISGRKDKRRFLARPRSERSE--KILYEINHEELVEGYTIASGLNFKGLGLS 3062
Query: 217 VALAETC------FPDPTSLAPLSQADESVELRALNETGSRCYKILASTKLCPYQGIPTK 378 A C F L+PL D +V++ A ++ G +C IL +K YQ +PTK Sbjct: 3063 ---ASACRHGSGQFGLLKELSPLGDMDGAVDISAYDDDG-KCTHILLCSKPSSYQAVPTK 3118
Query: 379 ILLLRPYTTYTNRLGEPLWLSQTPSDEPKTLAPSDWRVNF 498 ++ +RPY T+TNR G+ ++ + DEPK L DWRV+F Sbjct: 3119 VIYVRPYITFTNRAGQDFYIKLSAEDEPKVLHAHDWRVSF 3158
>tr|A3C7E5|A3C7E5_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_031217 PE=4 SV=1 Length = 4161
Score = 85.1 bits (209), Expect = 2e-15 Identities = 53/160 (33%), Positives = 83/160 (51%), Gaps = 9/160 (5%) Frame = +1
Query: 46 PPVYCNFVE---PKDKNRLHVHLDSKATSNIKILEIVQPEEMDGQFTMLSNFNIEKMGIF 216 PP+ ++ KDK R S+ + KIL + EE+ +T+ S N + +G+ Sbjct: 3101 PPINLQLIDISGRKDKRRFLARPRSERSE--KILYEINHEELVEGYTIASGLNFKGLGLS 3158
Query: 217 VALAETC------FPDPTSLAPLSQADESVELRALNETGSRCYKILASTKLCPYQGIPTK 378 A C F L+PL D +V++ A ++ G +C IL +K YQ +PTK Sbjct: 3159 ---ASACRHGSGQFGLLKELSPLGDMDGAVDISAYDDDG-KCTHILLCSKPSSYQAVPTK 3214
Query: 379 ILLLRPYTTYTNRLGEPLWLSQTPSDEPKTLAPSDWRVNF 498 ++ +RPY T+TNR G+ ++ + DEPK L DWRV+F Sbjct: 3215 VIYVRPYITFTNRAGQDFYIKLSAEDEPKVLHAHDWRVSF 3254
>tr|A9RMV8|A9RMV8_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_160029 PE=4 SV=1 Length = 4849
Score = 71.2 bits (173), Expect(2) = 7e-13 Identities = 48/126 (38%), Positives = 67/126 (53%), Gaps = 3/126 (2%) Frame = +1
Query: 130 KILEIVQPEEMDGQFTMLSNFNIEKMGIFVALAE---TCFPDPTSLAPLSQADESVELRA 300 K LE + E+ MLSN++ MG+ VAL+ T F SL L+ + SV+L Sbjct: 3713 KSLEEIVEEDTHRHPIMLSNYDCTTMGLAVALSGSECTQFGPVASLDALADPNGSVDLLV 3772
Query: 301 LNETGSRCYKILASTKLCPYQGIPTKILLLRPYTTYTNRLGEPLWLSQTPSDEPKTLAPS 480 + S +K L +T P+ T+++ LRPYT +TN+LG PL L Q DE KTL Sbjct: 3773 FDGEHSH-FKFLVTTTSHPHGFAQTQVVRLRPYTLFTNQLGAPLELRQAGGDESKTLHSW 3831
Query: 481 DWRVNF 498 DW+ F Sbjct: 3832 DWQTAF 3837
Score = 25.4 bits (54), Expect(2) = 7e-13 Identities = 8/10 (80%), Positives = 10/10 (100%) Frame = +2
Query: 5 IRFYVPCWLD 34 I+F+VPCWLD Sbjct: 3674 IQFHVPCWLD 3683
>tr|A7PCH1|A7PCH1_VITVI Chromosome chr2 scaffold_11, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00015859001 PE=4 SV=1 Length = 2014
Score = 51.6 bits (122), Expect = 2e-05 Identities = 34/105 (32%), Positives = 57/105 (54%), Gaps = 3/105 (2%) Frame = +1
Query: 82 KNRLHVHLDSKATSNIKILEIVQPEEMDGQFTMLSNFNIEKMGIFVALAETC---FPDPT 252 K+ L H SK + + EI + E +G +T+ S N + +G+ V++ ++ F Sbjct: 956 KSSLPFH--SKKNNEVIFEEITEEEIFEG-YTIASALNFKLLGLSVSITQSGAEQFGPVQ 1012
Query: 253 SLAPLSQADESVELRALNETGSRCYKILASTKLCPYQGIPTKILL 387 L+PL D S++L A + G +C ++ S+K C YQ +PTKI L Sbjct: 1013 DLSPLGDTDASLDLNAYDVDG-KCMRLFISSKPCLYQSVPTKIRL 1056
>tr|O23557|O23557_ARATH Putative uncharacterized protein dl4595c (Putative uncharacterized protein AT4g17120) OS=Arabidopsis thaliana GN=dl4595c PE=4 SV=1 Length = 1661
Score = 45.4 bits (106), Expect = 0.002 Identities = 29/110 (26%), Positives = 55/110 (50%), Gaps = 3/110 (2%) Frame = +1
Query: 67 VEPKDKNRLHVHLDSKATSNIKILEIVQPEEMDGQFTMLSNFNIEKMGIFVALAE---TC 237 V K ++ + SK + + E+ + E +G T+ S N + +G+ V++++ Sbjct: 966 VRKKQTRKVGLPFRSKKNDEVVLDEVTEEEIYEGH-TIASTLNFKLLGLSVSISQFGNQQ 1024
Query: 238 FPDPTSLAPLSQADESVELRALNETGSRCYKILASTKLCPYQGIPTKILL 387 L+ L D S+++ A + G+ C ++ STK C YQ +PTK+ L Sbjct: 1025 HGPVKDLSALGDMDGSLDVDAYDPDGN-CMRLFLSTKPCAYQSVPTKVRL 1073
>tr|A7AWL4|A7AWL4_BABBO Putative uncharacterized protein OS=Babesia bovis GN=BBOV_I003600 PE=4 SV=1 Length = 4820
Score = 36.2 bits (82), Expect = 0.92 Identities = 17/49 (34%), Positives = 24/49 (48%) Frame = +1
Query: 334 LASTKLCPYQGIPTKILLLRPYTTYTNRLGEPLWLSQTPSDEPKTLAPS 480 L ST + P T +L + P TT TN+ PLWL + P + P+ Sbjct: 3534 LISTSMAPAPFFRTSVLEILPQTTVTNQFSHPLWLREPDIYAPGNVTPT 3582
>tr|A9TTH3|A9TTH3_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_96917 PE=4 SV=1 Length = 4687
Score = 34.7 bits (78), Expect = 2.7 Identities = 28/100 (28%), Positives = 49/100 (49%), Gaps = 10/100 (10%) Frame = +1
Query: 202 KMGIFVALAET-CFPDPTSLAPLSQADESVELRALNETGSRCYKILASTKLCPYQGIPTK 378 ++G+ +A+A + F S E V L A+++ G+ YK+ A + + TK Sbjct: 3546 RLGLAIAVANSNVFNRALSFRDFENNMERVNLNAVDDGGAY-YKLSAYLDMSSDR---TK 3601
Query: 379 ILLLRPYTTYTNRLGEPLWLSQT---------PSDEPKTL 471 ++ ++P+T + NRLG L L Q P+D PK + Sbjct: 3602 VIHVQPHTLFVNRLGRRLSLRQCDLRHEELFYPNDPPKAI 3641
>tr|A8XV81|A8XV81_CAEBR Putative uncharacterized protein OS=Caenorhabditis briggsae GN=CBG19266 PE=4 SV=1 Length = 417
Score = 34.3 bits (77), Expect = 3.5 Identities = 25/79 (31%), Positives = 38/79 (48%) Frame = +1
Query: 76 KDKNRLHVHLDSKATSNIKILEIVQPEEMDGQFTMLSNFNIEKMGIFVALAETCFPDPTS 255 +D+N L ++ + SNI L + QP + D + + + F ALAET P+ TS Sbjct: 144 EDENHLKGYMAIEFVSNIHSLLMFQPIKADDLIAL-----VRGIATFAALAETLSPEETS 198
Query: 256 LAPLSQADESVELRALNET 312 A E V + +NET Sbjct: 199 FAMGPDYLEMVYEQFMNET 217
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