BP916409
Clone id YMU001_000087_D04
Library
Length 552
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000087_D04.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
ATGTGACAAACATCTTAAGGCTTGCATTTAACAAATTAAACCACCAACATTGCCCCCAAT
TACAAAAGTAAGTTCTTCTATGAGAGAGAACCGTACTCACCAATCCATGCTTGCAACTAT
CCCCTTATCTGCAATCAGCACCGTGGCAGCAATCAAGCTTACCTCCGACTCATTTCAAGT
AAGACAAGGCGTTTGGGCGATAGGGAACACCTCCCCAACAAGTTCAAGAGTACGAGCATC
ATGCATACCTTACTTGAGTACTCAGATTTTGATGACATCCAAGCTTGCTTTCCTCAAGTT
TTCAGCCCAAACCACTCCTTACATACCTATCCTCCAACCACGTAGAGTATTCTCAATTGC
TACTCTCCACATTCCTTGCGCATAGTCACTCATCAGCTTGACATAGACCATGTGACATGT
TTCACTTGGTCCCATAGGTCATAATGATAACATTTATCTCTCACCCAATTCATGTCACTG
GCCCTACTGAATGTCCTTCATTAGAGTCTACTTGGCCCAACACGATGGTTTGTCCCTGTG
ATATGACAAATC
■■Homology search results ■■ -
sp_hit_id Q9H195
Definition sp|Q9H195|MUC3B_HUMAN Mucin-3B (Fragment) OS=Homo sapiens
Align length 102
Score (bit) 34.3
E-value 0.41
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP916409|Adiantum capillus-veneris mRNA, clone:
YMU001_000087_D04.
(552 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q9H195|MUC3B_HUMAN Mucin-3B (Fragment) OS=Homo sapiens GN=MUC... 34 0.41
sp|P92521|M840_ARATH Uncharacterized mitochondrial protein AtMg0... 31 3.5

>sp|Q9H195|MUC3B_HUMAN Mucin-3B (Fragment) OS=Homo sapiens GN=MUC3B
PE=2 SV=1
Length = 901

Score = 34.3 bits (77), Expect = 0.41
Identities = 31/102 (30%), Positives = 47/102 (46%), Gaps = 2/102 (1%)
Frame = +2

Query: 35 IKPPTLPPITKVSSSMRENRTHQSMLATIP--LSAISTVAAIKLTSDSFQVRQGVWAIGN 208
I +L +T +S S + T + L +IP +S++ T I +S S Q + +G
Sbjct: 61 IPTTSLRTLTPLSLSTSTSLTTTTDLPSIPTDISSLPTPIHIISSSPSIQSTETSSLVGT 120

Query: 209 TSPTSSRVRASCIPYLSTQILMTSKLAFLKFSAQTTPYIPIL 334
TSPT S VRA+ +T I S + TT P+L
Sbjct: 121 TSPTMSTVRATLRSTENTPISSFSTSIVVTPETPTTQAPPVL 162


>sp|P92521|M840_ARATH Uncharacterized mitochondrial protein
AtMg00840 OS=Arabidopsis thaliana GN=AtMg00840 PE=4 SV=1
Length = 121

Score = 31.2 bits (69), Expect = 3.5
Identities = 23/59 (38%), Positives = 32/59 (54%), Gaps = 4/59 (6%)
Frame = +2

Query: 212 SPTSSRVRASCIPYLSTQILMT-SKLAFLKFSAQTTPYIPILQPRRV---FSIATLHIP 376
+P S + SC P + ILM S+L L +A+TT IP+L P + FS+ LH P
Sbjct: 6 APESIKTMTSC-PAICPLILMDLSQLLNLPSTAKTTRVIPLLHPHLILLSFSLFQLHQP 63


tr_hit_id Q54T65
Definition tr|Q54T65|Q54T65_DICDI Pleckstrin homology (PH) domain-containing protein OS=Dictyostelium discoideum
Align length 113
Score (bit) 37.4
E-value 0.53
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP916409|Adiantum capillus-veneris mRNA, clone:
YMU001_000087_D04.
(552 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q54T65|Q54T65_DICDI Pleckstrin homology (PH) domain-containin... 37 0.53
tr|Q4E0R3|Q4E0R3_TRYCR Kinesin, putative OS=Trypanosoma cruzi GN... 35 2.0
tr|O17970|O17970_CAEEL Protein M02G9.1a, partially confirmed by ... 34 5.9
tr|B6VQ93|B6VQ93_CAEEL Protein M02G9.1b, partially confirmed by ... 34 5.9
tr|B4GVP7|B4GVP7_DROPE GL14695 OS=Drosophila persimilis GN=GL146... 33 10.0

>tr|Q54T65|Q54T65_DICDI Pleckstrin homology (PH) domain-containing
protein OS=Dictyostelium discoideum GN=gxcG PE=4 SV=1
Length = 639

Score = 37.4 bits (85), Expect = 0.53
Identities = 30/113 (26%), Positives = 54/113 (47%), Gaps = 9/113 (7%)
Frame = +2

Query: 38 KPPTLPPITKVSSSMRENRTH--------QSMLATIPLSAISTVAAIKLTSDSFQVRQG- 190
KPPT+PP TK+++S + T S A +P+ I T ++ ++ Q +Q
Sbjct: 107 KPPTIPP-TKITTSPMTSPTKLSTPTPTPPSQSAQLPIKVIPTPSSPIAIINNVQPQQSP 165

Query: 191 VWAIGNTSPTSSRVRASCIPYLSTQILMTSKLAFLKFSAQTTPYIPILQPRRV 349
+ NT+P+SS + +S + + T+ + FS+ +P P+ P V
Sbjct: 166 TLSSTNTTPSSSPIASSKLNNTPSTTTTTTNTTTVSFSSSPSPTPPLSIPSPV 218


>tr|Q4E0R3|Q4E0R3_TRYCR Kinesin, putative OS=Trypanosoma cruzi
GN=Tc00.1047053506297.50 PE=3 SV=1
Length = 1038

Score = 35.4 bits (80), Expect = 2.0
Identities = 16/64 (25%), Positives = 34/64 (53%)
Frame = +2

Query: 155 KLTSDSFQVRQGVWAIGNTSPTSSRVRASCIPYLSTQILMTSKLAFLKFSAQTTPYIPIL 334
+L ++ +QG ++ ++ + S R + + ST + K+ F++F+ T P +P
Sbjct: 812 RLGQETLFAQQGTTSLRQSASSESTARKKSLGFNSTASVNEKKVKFVEFTKNTVPIVPPQ 871

Query: 335 QPRR 346
QP+R
Sbjct: 872 QPQR 875


>tr|O17970|O17970_CAEEL Protein M02G9.1a, partially confirmed by
transcript evidence OS=Caenorhabditis elegans GN=M02G9.1
PE=1 SV=3
Length = 909

Score = 33.9 bits (76), Expect = 5.9
Identities = 36/111 (32%), Positives = 50/111 (45%), Gaps = 2/111 (1%)
Frame = +2

Query: 14 LKACI*QIKPPTLP-PITKVSSSMRENRTHQSMLATIP-LSAISTVAAIKLTSDSFQVRQ 187
++A + QI+P + I + S ENR + A+ P + A S A +L+ DS
Sbjct: 250 VQAQVQQIQPQQVQITIPQTCQSRCENRCLSTCTASQPSVCAPSCSTACQLSCDSIGAAT 309

Query: 188 GVWAIGNTSPTSSRVRASCIPYLSTQILMTSKLAFLKFSAQTTPYIPILQP 340
A +T+PT VRA C P Q L S A + TPYI L P
Sbjct: 310 ---APQSTNPTPVEVRALCTPTCMPQCL-PSCTATTTTTTTQTPYIQTLAP 356


>tr|B6VQ93|B6VQ93_CAEEL Protein M02G9.1b, partially confirmed by
transcript evidence OS=Caenorhabditis elegans
GN=M02G9.1B PE=4 SV=1
Length = 1499

Score = 33.9 bits (76), Expect = 5.9
Identities = 36/111 (32%), Positives = 50/111 (45%), Gaps = 2/111 (1%)
Frame = +2

Query: 14 LKACI*QIKPPTLP-PITKVSSSMRENRTHQSMLATIP-LSAISTVAAIKLTSDSFQVRQ 187
++A + QI+P + I + S ENR + A+ P + A S A +L+ DS
Sbjct: 250 VQAQVQQIQPQQVQITIPQTCQSRCENRCLSTCTASQPSVCAPSCSTACQLSCDSIGAAT 309

Query: 188 GVWAIGNTSPTSSRVRASCIPYLSTQILMTSKLAFLKFSAQTTPYIPILQP 340
A +T+PT VRA C P Q L S A + TPYI L P
Sbjct: 310 ---APQSTNPTPVEVRALCTPTCMPQCL-PSCTATTTTTTTQTPYIQTLAP 356


>tr|B4GVP7|B4GVP7_DROPE GL14695 OS=Drosophila persimilis GN=GL14695
PE=4 SV=1
Length = 753

Score = 33.1 bits (74), Expect = 10.0
Identities = 30/105 (28%), Positives = 47/105 (44%)
Frame = +2

Query: 62 TKVSSSMRENRTHQSMLATIPLSAISTVAAIKLTSDSFQVRQGVWAIGNTSPTSSRVRAS 241
T SS + + T +LA + A+ VAA+ + + S G + +PT S + A+
Sbjct: 238 TSNGSSSQGSTTTGGVLAAANIVAV--VAAVAMANSSSSSSSGSGSASTATPTPSAISAN 295

Query: 242 CIPYLSTQILMTSKLAFLKFSAQTTPYIPILQPRRVFSIATLHIP 376
+PY TQ +S + + Q +PI V AT HIP
Sbjct: 296 PLPY--TQSSSSSNHSPNAANVQVPTQVPI----AVSPAATSHIP 334