BP916411 |
Clone id |
YMU001_000087_D07 |
Library |
YMU01 |
Length |
549 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000087_D07. |
Accession |
BP916411 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL3066Contig1 |
Sequence |
CAGGTAGAATGTGCCACAAGATCAGACGATCGATAAGAGAATTGAAAACCAGCGGCATAG GATCTAACAATTCTCCTGAGCCTTTGTTGTTATCTCCAAACTGAATTACTTCCTTGGAAC TCCCGTTCATTCTTTTCTCAACTACGAATGTCTTTCCACCAAATTCTCCTCGCCTTCCTG AAGACTGCAATTCCGTTATAAGAGAAGCAACTTGTGAAGCCTCATATGTGTTCAGCACAT TTTCGTAAAGTTCCAACCCTTCAGCCACATTTACCAAACTTCCATCGACATGCTCCCAGC ACTGAAAATGTTTTGAGACTTTAATCATGGGAAGGTGTGCATCTTGTTCTTCCTTAGAAA GAGCAGTAAAATCTGTACTGAATAGCTTTCCCCAAGAGATCCTGCAGGCTTTGGTGGCAC ATTGGAAGTCTTGCTCTCAGGATTAACAATAATTTCTTGTCCCTCTGGAGACTTCGTCAT TGTCCTATTTGGGGAGACCTGACTTGAAGACTGTTCAGTGGGATCAAGGGCAGGTTTTGA ACGGCTCTG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P49744 |
Definition |
sp|P49744|TSP4_RAT Thrombospondin-4 OS=Rattus norvegicus |
Align length |
64 |
Score (bit) |
34.3 |
E-value |
0.41 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q67Y44 |
Definition |
tr|Q67Y44|Q67Y44_ARATH Putative uncharacterized protein At4g36090 OS=Arabidopsis thaliana |
Align length |
135 |
Score (bit) |
85.9 |
E-value |
1.0e-15 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP916411|Adiantum capillus-veneris mRNA, clone: YMU001_000087_D07. (549 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q67Y44|Q67Y44_ARATH Putative uncharacterized protein At4g3609... 86 1e-15 tr|Q5RJC7|Q5RJC7_ARATH At4g36090 OS=Arabidopsis thaliana PE=2 SV=1 86 1e-15 tr|Q2V3B6|Q2V3B6_ARATH Uncharacterized protein At4g36090.1 OS=Ar... 86 1e-15 tr|Q9SL49|Q9SL49_ARATH Putative uncharacterized protein At2g1797... 83 8e-15 tr|A8MRW3|A8MRW3_ARATH Uncharacterized protein At2g17970.2 OS=Ar... 83 8e-15 tr|Q5VPG7|Q5VPG7_ORYSJ Os06g0138200 protein OS=Oryza sativa subs... 79 2e-13 tr|B8B2A9|B8B2A9_ORYSI Putative uncharacterized protein OS=Oryza... 79 2e-13 tr|Q9ZT92|Q9ZT92_ARATH Putative uncharacterized protein AT4g0294... 79 2e-13 tr|A7QDZ0|A7QDZ0_VITVI Chromosome chr4 scaffold_83, whole genome... 79 2e-13 tr|A5B5L4|A5B5L4_VITVI Putative uncharacterized protein OS=Vitis... 79 2e-13 tr|B8AY32|B8AY32_ORYSI Putative uncharacterized protein OS=Oryza... 76 1e-12 tr|A3B3V5|A3B3V5_ORYSJ Putative uncharacterized protein OS=Oryza... 76 1e-12 tr|A1YKE1|A1YKE1_BRASY Oxidoreductase OS=Brachypodium sylvaticum... 76 1e-12 tr|B6ST02|B6ST02_MAIZE Oxidoreductase, 2OG-Fe oxygenase family p... 75 2e-12 tr|A9PG91|A9PG91_POPTR Putative uncharacterized protein OS=Popul... 75 2e-12 tr|B8LLT0|B8LLT0_PICSI Putative uncharacterized protein OS=Picea... 72 2e-11 tr|O65646|O65646_ARATH Putative uncharacterized protein T19K4.22... 71 3e-11 tr|Q676Z3|Q676Z3_HYAOR Putative uncharacterized protein (Fragmen... 71 4e-11 tr|Q9M9A0|Q9M9A0_ARATH F27J15.23 OS=Arabidopsis thaliana GN=At1g... 70 6e-11 tr|Q9FVQ3|Q9FVQ3_ARATH Putative uncharacterized protein F27K7.16... 70 6e-11 tr|Q5XVJ2|Q5XVJ2_ARATH Putative uncharacterized protein OS=Arabi... 70 6e-11 tr|Q5XVJ1|Q5XVJ1_ARATH Putative uncharacterized protein OS=Arabi... 70 6e-11 tr|B8AY31|B8AY31_ORYSI Putative uncharacterized protein OS=Oryza... 70 6e-11 tr|A7PU45|A7PU45_VITVI Chromosome chr7 scaffold_31, whole genome... 70 7e-11 tr|Q9LQV9|Q9LQV9_ARATH F10B6.11 OS=Arabidopsis thaliana PE=4 SV=1 69 2e-10 tr|B7ZX44|B7ZX44_MAIZE Putative uncharacterized protein OS=Zea m... 69 2e-10 tr|A2Q3T7|A2Q3T7_MEDTR 2OG-Fe(II) oxygenase OS=Medicago truncatu... 68 4e-10 tr|Q9ZU81|Q9ZU81_ARATH Putative uncharacterized protein At2g4808... 67 6e-10 tr|A7P401|A7P401_VITVI Chromosome chr1 scaffold_5, whole genome ... 67 8e-10 tr|A5BBI5|A5BBI5_VITVI Putative uncharacterized protein OS=Vitis... 67 8e-10
>tr|Q67Y44|Q67Y44_ARATH Putative uncharacterized protein At4g36090 OS=Arabidopsis thaliana GN=At4g36090 PE=2 SV=1 Length = 452
Score = 85.9 bits (211), Expect = 1e-15 Identities = 53/135 (39%), Positives = 73/135 (54%), Gaps = 15/135 (11%) Frame = -3
Query: 361 LSKEEQDAHLPM-IKVSKHFQCWEHVDGSLVNVAEGLELYENVLNTYEASQVASLITELQ 185 LS+EE++ + M +K K F C+E V G VN+ EGLEL+ V + E ++ + ELQ Sbjct: 116 LSREERERYRFMNVKKMKVFSCYEKVRGRSVNILEGLELHTGVFSAVEQKKIVDFVYELQ 175
Query: 184 SSGRRGEFGGKTFVV-EKRMNGSSKEVIQFG----------DNNKG---SGELLDPMPLV 47 GRRGE +TF K M G + IQFG N G G+ +DPMP + Sbjct: 176 EKGRRGELRERTFTAPHKWMRGKGRVTIQFGCCYNYAPDKAGNPPGILQRGD-VDPMPSI 234
Query: 46 FNSLIDRLILWHILP 2 F +I RL+ WH+LP Sbjct: 235 FKVIIKRLVGWHVLP 249
>tr|Q5RJC7|Q5RJC7_ARATH At4g36090 OS=Arabidopsis thaliana PE=2 SV=1 Length = 520
Score = 85.9 bits (211), Expect = 1e-15 Identities = 53/135 (39%), Positives = 73/135 (54%), Gaps = 15/135 (11%) Frame = -3
Query: 361 LSKEEQDAHLPM-IKVSKHFQCWEHVDGSLVNVAEGLELYENVLNTYEASQVASLITELQ 185 LS+EE++ + M +K K F C+E V G VN+ EGLEL+ V + E ++ + ELQ Sbjct: 184 LSREERERYRFMNVKKMKVFSCYEKVRGRSVNILEGLELHTGVFSAVEQKKIVDFVYELQ 243
Query: 184 SSGRRGEFGGKTFVV-EKRMNGSSKEVIQFG----------DNNKG---SGELLDPMPLV 47 GRRGE +TF K M G + IQFG N G G+ +DPMP + Sbjct: 244 EKGRRGELRERTFTAPHKWMRGKGRVTIQFGCCYNYAPDKAGNPPGILQRGD-VDPMPSI 302
Query: 46 FNSLIDRLILWHILP 2 F +I RL+ WH+LP Sbjct: 303 FKVIIKRLVGWHVLP 317
>tr|Q2V3B6|Q2V3B6_ARATH Uncharacterized protein At4g36090.1 OS=Arabidopsis thaliana GN=At4g36090 PE=4 SV=1 Length = 385
Score = 85.9 bits (211), Expect = 1e-15 Identities = 53/135 (39%), Positives = 73/135 (54%), Gaps = 15/135 (11%) Frame = -3
Query: 361 LSKEEQDAHLPM-IKVSKHFQCWEHVDGSLVNVAEGLELYENVLNTYEASQVASLITELQ 185 LS+EE++ + M +K K F C+E V G VN+ EGLEL+ V + E ++ + ELQ Sbjct: 184 LSREERERYRFMNVKKMKVFSCYEKVRGRSVNILEGLELHTGVFSAVEQKKIVDFVYELQ 243
Query: 184 SSGRRGEFGGKTFVV-EKRMNGSSKEVIQFG----------DNNKG---SGELLDPMPLV 47 GRRGE +TF K M G + IQFG N G G+ +DPMP + Sbjct: 244 EKGRRGELRERTFTAPHKWMRGKGRVTIQFGCCYNYAPDKAGNPPGILQRGD-VDPMPSI 302
Query: 46 FNSLIDRLILWHILP 2 F +I RL+ WH+LP Sbjct: 303 FKVIIKRLVGWHVLP 317
>tr|Q9SL49|Q9SL49_ARATH Putative uncharacterized protein At2g17970 (At2g17970) OS=Arabidopsis thaliana GN=At2g17970 PE=2 SV=1 Length = 507
Score = 83.2 bits (204), Expect = 8e-15 Identities = 48/130 (36%), Positives = 68/130 (52%), Gaps = 13/130 (10%) Frame = -3
Query: 352 EEQDAHLPMIKVSKHFQCWEHVDGSLVNVAEGLELYENVLNTYEASQVASLITELQSSGR 173 + ++ L +K K F C E V G +VNV +GLEL+ V + E ++ + +LQ GR Sbjct: 184 QRENLRLINVKRKKDFICLERVKGKIVNVLDGLELHTGVFSAVEQKRIVDQVYQLQEKGR 243
Query: 172 RGEFGGKTFVV-EKRMNGSSKEVIQFG----------DNNKG--SGELLDPMPLVFNSLI 32 RGE +TF K M G +E IQFG N G E +DP+P +F +I Sbjct: 244 RGELKKRTFTAPHKWMRGKGRETIQFGCCYNYAPDRAGNPPGILQREEVDPLPHLFKVII 303
Query: 31 DRLILWHILP 2 +LI WH+LP Sbjct: 304 RKLIKWHVLP 313
>tr|A8MRW3|A8MRW3_ARATH Uncharacterized protein At2g17970.2 OS=Arabidopsis thaliana GN=At2g17970 PE=4 SV=1 Length = 433
Score = 83.2 bits (204), Expect = 8e-15 Identities = 48/130 (36%), Positives = 68/130 (52%), Gaps = 13/130 (10%) Frame = -3
Query: 352 EEQDAHLPMIKVSKHFQCWEHVDGSLVNVAEGLELYENVLNTYEASQVASLITELQSSGR 173 + ++ L +K K F C E V G +VNV +GLEL+ V + E ++ + +LQ GR Sbjct: 110 QRENLRLINVKRKKDFICLERVKGKIVNVLDGLELHTGVFSAVEQKRIVDQVYQLQEKGR 169
Query: 172 RGEFGGKTFVV-EKRMNGSSKEVIQFG----------DNNKG--SGELLDPMPLVFNSLI 32 RGE +TF K M G +E IQFG N G E +DP+P +F +I Sbjct: 170 RGELKKRTFTAPHKWMRGKGRETIQFGCCYNYAPDRAGNPPGILQREEVDPLPHLFKVII 229
Query: 31 DRLILWHILP 2 +LI WH+LP Sbjct: 230 RKLIKWHVLP 239
>tr|Q5VPG7|Q5VPG7_ORYSJ Os06g0138200 protein OS=Oryza sativa subsp. japonica GN=OSJNBa0041F13.13-1 PE=4 SV=1 Length = 616
Score = 79.0 bits (193), Expect = 2e-13 Identities = 43/117 (36%), Positives = 63/117 (53%), Gaps = 13/117 (11%) Frame = -3
Query: 313 KHFQCWEHVDGSLVNVAEGLELYENVLNTYEASQVASLITELQSSGRRGEFGGKTFVVEK 134 K F C+E V+G LVN+ GLEL+ V + E ++ + +LQ G+ GE G +T+ + Sbjct: 186 KDFICFERVNGRLVNILAGLELHCGVFSAAEQKRIVDYVYDLQEMGKHGELGDRTYTEPQ 245
Query: 133 R-MNGSSKEVIQFG-------DNNKGSGELL-----DPMPLVFNSLIDRLILWHILP 2 R M G + IQFG D N ++ DPMP +F +I RL+ WH+LP Sbjct: 246 RWMRGKGRVTIQFGCCYNYATDKNGNPPGIIRTIASDPMPSLFKIMIKRLVRWHVLP 302
>tr|B8B2A9|B8B2A9_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_21553 PE=4 SV=1 Length = 600
Score = 79.0 bits (193), Expect = 2e-13 Identities = 43/117 (36%), Positives = 63/117 (53%), Gaps = 13/117 (11%) Frame = -3
Query: 313 KHFQCWEHVDGSLVNVAEGLELYENVLNTYEASQVASLITELQSSGRRGEFGGKTFVVEK 134 K F C+E V+G LVN+ GLEL+ V + E ++ + +LQ G+ GE G +T+ + Sbjct: 171 KDFICFERVNGRLVNILAGLELHCGVFSAAEQKRIVDYVYDLQEMGKHGELGDRTYTEPQ 230
Query: 133 R-MNGSSKEVIQFG-------DNNKGSGELL-----DPMPLVFNSLIDRLILWHILP 2 R M G + IQFG D N ++ DPMP +F +I RL+ WH+LP Sbjct: 231 RWMRGKGRVTIQFGCCYNYATDKNGNPPGIIRTIASDPMPSLFKIMIKRLVRWHVLP 287
>tr|Q9ZT92|Q9ZT92_ARATH Putative uncharacterized protein AT4g02940 OS=Arabidopsis thaliana GN=AT4g02940 PE=2 SV=1 Length = 569
Score = 78.6 bits (192), Expect = 2e-13 Identities = 43/132 (32%), Positives = 72/132 (54%), Gaps = 13/132 (9%) Frame = -3
Query: 358 SKEEQDAHLPMIKVSKHFQCWEHVDGSLVNVAEGLELYENVLNTYEASQVASLITELQSS 179 S E+ DA IK K FQ E V G VNV +GL+LYE +L E S++ + EL+ + Sbjct: 208 SHEDCDARSCEIKPIKGFQAKEQVKGHTVNVVKGLKLYEELLKEDEISKLLDFVAELREA 267
Query: 178 GRRGEFGGKTFVV-EKRMNGSSKEVIQFG------------DNNKGSGELLDPMPLVFNS 38 G G+ G++F++ K++ G+ +E+IQ G N+ + ++P+P + S Sbjct: 268 GINGKLAGESFILFNKQIKGNKRELIQLGVPIFGHVKADENSNDTNNSVNIEPIPPLLES 327
Query: 37 LIDRLILWHILP 2 +ID + W ++P Sbjct: 328 VIDHFVTWRLIP 339
>tr|A7QDZ0|A7QDZ0_VITVI Chromosome chr4 scaffold_83, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00036792001 PE=4 SV=1 Length = 510
Score = 78.6 bits (192), Expect = 2e-13 Identities = 49/149 (32%), Positives = 72/149 (48%), Gaps = 23/149 (15%) Frame = -3
Query: 379 STDFTALSKEEQDAHLPM----------IKVSKHFQCWEHVDGSLVNVAEGLELYENVLN 230 ST +SK + A LP ++ K F C E V G VN+ +GLEL+ + + Sbjct: 175 STGEVGVSKVPRKAELPREQREYIRFRNVQRKKDFICLERVKGKFVNILDGLELHVGIFS 234
Query: 229 TYEASQVASLITELQSSGRRGEFGGKTF-VVEKRMNGSSKEVIQFG-------DNNKG-- 80 E ++ I ELQ GR G+ +T+ +K M G + IQFG D N Sbjct: 235 AAEQKRIVDFIYELQEMGRNGQLKERTYSAPQKWMRGKGRVTIQFGCCYNYATDKNGNPP 294
Query: 79 ---SGELLDPMPLVFNSLIDRLILWHILP 2 E++DP+P +F +I RL+ WH+LP Sbjct: 295 GILQNEVVDPIPPLFKVIIRRLVRWHVLP 323
>tr|A5B5L4|A5B5L4_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_020466 PE=4 SV=1 Length = 849
Score = 78.6 bits (192), Expect = 2e-13 Identities = 49/149 (32%), Positives = 72/149 (48%), Gaps = 23/149 (15%) Frame = -3
Query: 379 STDFTALSKEEQDAHLPM----------IKVSKHFQCWEHVDGSLVNVAEGLELYENVLN 230 ST +SK + A LP ++ K F C E V G VN+ +GLEL+ + + Sbjct: 514 STGEVGVSKVPRKAELPREQREYIRFRNVQRKKDFICLERVKGKFVNILDGLELHVGIFS 573
Query: 229 TYEASQVASLITELQSSGRRGEFGGKTF-VVEKRMNGSSKEVIQFG-------DNNKG-- 80 E ++ I ELQ GR G+ +T+ +K M G + IQFG D N Sbjct: 574 AAEQKRIVDFIYELQEMGRNGQLKERTYSAPQKWMRGKGRVTIQFGCCYNYATDKNGNPP 633
Query: 79 ---SGELLDPMPLVFNSLIDRLILWHILP 2 E++DP+P +F +I RL+ WH+LP Sbjct: 634 GILQNEVVDPIPPLFKVIIRRLVRWHVLP 662
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