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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP916412
Clone id YMU001_000087_D08
Library
Length 490
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000087_D08.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
ATCAGTCATGATGAGAGGCTCCAGGATTCTCAGGTAGATGGATTGCATATTGACAGCCTG
GGCCCAAAGGTTGTGTGAACAAAGCAAACATATGGAAAGCTATGTATGGCTGGGGAGCCG
GTTGGCCAGGCGAAGAGCGGCTTTGTTGCAATCCCACCGAAACAGGGCGCTTAAGGTAGC
GTCCCATCTTCACCAGGAGCAGAGCTACCAAGGACTCATAGAGCAAGAGTGTACAATAAA
CAGCTAGCAAAAGCTTATTCTGGAGATGTTGCTGTCGATTAGCATATATGGTGGTAGAGA
ACAAAGAGAGGAGCACTTGTACGAATGCAAACAGGGAAGGCAGCATTCCTCCAGTGAACA
TAAATGCAATGAGCTCGCATATTCTGTTGACGATCATCGGGCAAAGATGCCAGGCAAAAT
AAAGGGTGGACAACTGGTACCAGAGAAACGCACCCAAGACGCTCAGGTCGACTACGCTCA
AAATGAAAGC
■■Homology search results ■■ -
sp_hit_id Q96A59
Definition sp|Q96A59|MALD3_HUMAN MARVEL domain-containing protein 3 OS=Homo sapiens
Align length 65
Score (bit) 31.2
E-value 2.7
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP916412|Adiantum capillus-veneris mRNA, clone:
YMU001_000087_D08.
         (490 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q96A59|MALD3_HUMAN MARVEL domain-containing protein 3 OS=Homo...    31   2.7  
sp|A0K1L3|DNAK_ARTS2 Chaperone protein dnaK OS=Arthrobacter sp. ...    30   4.5  
sp|Q6JBY9|CPZIP_HUMAN Capz-interacting protein OS=Homo sapiens G...    30   4.5  
sp|P55461|Y4GE_RHISN Uncharacterized protein y4gE OS=Rhizobium s...    30   5.9  
sp|Q6AC76|DNAK_LEIXX Chaperone protein dnaK OS=Leifsonia xyli su...    30   7.8  

>sp|Q96A59|MALD3_HUMAN MARVEL domain-containing protein 3 OS=Homo
           sapiens GN=MARVELD3 PE=2 SV=3
          Length = 401

 Score = 31.2 bits (69), Expect = 2.7
 Identities = 17/65 (26%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
 Frame = -1

Query: 445 LWYQLSTLYFAWHLCPMIVNRICE-LIAFMFTGGMLPSLFAFVQVLLSLFSTTIYANRQQ 269
           L+  +  L   WH CP+++  + E L+  +  GG +P+L+ +   L + + + +   RQ 
Sbjct: 286 LFVAMGVLRVPWH-CPLLL--VTEGLLDMLIAGGYIPALYFYFHYLSAAYGSPVCKERQA 342

Query: 268 HLQNK 254
             Q+K
Sbjct: 343 LYQSK 347


>sp|A0K1L3|DNAK_ARTS2 Chaperone protein dnaK OS=Arthrobacter sp.
           (strain FB24) GN=dnaK PE=2 SV=1
          Length = 622

 Score = 30.4 bits (67), Expect = 4.5
 Identities = 16/43 (37%), Positives = 25/43 (58%), Gaps = 4/43 (9%)
 Frame = +2

Query: 308 EEHLYECKQGRQHSSSEHKCNELAYSVD----DHRAKMPGKIK 424
           EEH  E K  R+ + + +   +LAYSVD    D+  K+P ++K
Sbjct: 497 EEHAAEDKARREATDTRNTAEQLAYSVDKLIADNADKLPEEVK 539


>sp|Q6JBY9|CPZIP_HUMAN Capz-interacting protein OS=Homo sapiens
           GN=RCSD1 PE=1 SV=1
          Length = 416

 Score = 30.4 bits (67), Expect = 4.5
 Identities = 21/72 (29%), Positives = 34/72 (47%)
 Frame = +2

Query: 263 EMLLSISIYGGREQREEHLYECKQGRQHSSSEHKCNELAYSVDDHRAKMPGKIKGGQLVP 442
           EM  +  + G R Q EE       G +H S E K  E   +V +     PG +KGG +  
Sbjct: 310 EMEKATEVKGERVQNEE------VGPEHDSQETKKLEEGAAVKETPHSPPGGVKGGDVPK 363

Query: 443 EKRTQDAQVDYA 478
           +++ ++ Q + A
Sbjct: 364 QEKGKEKQQEGA 375


>sp|P55461|Y4GE_RHISN Uncharacterized protein y4gE OS=Rhizobium sp.
           (strain NGR234) GN=y4gE PE=4 SV=1
          Length = 248

 Score = 30.0 bits (66), Expect = 5.9
 Identities = 17/64 (26%), Positives = 33/64 (51%)
 Frame = +2

Query: 296 REQREEHLYECKQGRQHSSSEHKCNELAYSVDDHRAKMPGKIKGGQLVPEKRTQDAQVDY 475
           R+     L    Q RQ +   H   +L  ++++  + + G+ +G  L+P+K   +AQVD 
Sbjct: 45  RDAAPRSLIATPQARQVADRFHLYADLRVAIEEQMS-LSGRARGRALLPDKIIGNAQVDL 103

Query: 476 AQNE 487
            Q++
Sbjct: 104 IQDD 107


>sp|Q6AC76|DNAK_LEIXX Chaperone protein dnaK OS=Leifsonia xyli
           subsp. xyli GN=dnaK PE=2 SV=1
          Length = 624

 Score = 29.6 bits (65), Expect = 7.8
 Identities = 14/45 (31%), Positives = 26/45 (57%), Gaps = 4/45 (8%)
 Frame = +2

Query: 302 QREEHLYECKQGRQHSSSEHKCNELAYSVD----DHRAKMPGKIK 424
           + EEH  E K+ R+ + + ++  +L YS++    D+  K+P  IK
Sbjct: 496 EAEEHAAEDKKRRESAETRNQAEQLVYSIEKLIKDNEEKLPEDIK 540
tr_hit_id B7DCY6
Definition tr|B7DCY6|B7DCY6_DESSA Aromatic amino acid permease OS=Desulfovibrio salexigens DSM 2638
Align length 48
Score (bit) 34.7
E-value 2.4
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP916412|Adiantum capillus-veneris mRNA, clone:
YMU001_000087_D08.
         (490 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B7DCY6|B7DCY6_DESSA Aromatic amino acid permease OS=Desulfovi...    35   2.4  
tr|Q2LEB6|Q2LEB6_ENTIV Jacob 7 (Fragment) OS=Entamoeba invadens ...    35   2.4  
tr|B0UAD1|B0UAD1_METS4 Sel1 domain protein repeat-containing pro...    33   5.5  
tr|Q7PZG9|Q7PZG9_ANOGA AGAP011902-PA (Fragment) OS=Anopheles gam...    33   5.5  
tr|B7QNU7|B7QNU7_IXOSC Jnk/sapk-associated protein, putative OS=...    33   5.5  
tr|Q7ZZ40|Q7ZZ40_DANRE Novel protein similar to human autism-rel...    33   9.3  
tr|A4I4W2|A4I4W2_LEIIN Putative uncharacterized protein OS=Leish...    33   9.3  
tr|Q6BMY8|Q6BMY8_DEBHA DEHA2F01584p OS=Debaryomyces hansenii GN=...    33   9.3  

>tr|B7DCY6|B7DCY6_DESSA Aromatic amino acid permease
           OS=Desulfovibrio salexigens DSM 2638 GN=DesalDRAFT_0591
           PE=3 SV=1
          Length = 383

 Score = 34.7 bits (78), Expect = 2.4
 Identities = 23/48 (47%), Positives = 27/48 (56%), Gaps = 5/48 (10%)
 Frame = -1

Query: 418 FAWHLC-PMIVNRICE----LIAFMFTGGMLPSLFAFVQVLLSLFSTT 290
           F +H+C P IV  I E    LI  M  GG LPSL   + + LSL STT
Sbjct: 188 FGYHVCIPSIVTYIGEDKKSLIRIMLIGGALPSLCYLLWLFLSLSSTT 235


>tr|Q2LEB6|Q2LEB6_ENTIV Jacob 7 (Fragment) OS=Entamoeba invadens
           PE=4 SV=2
          Length = 614

 Score = 34.7 bits (78), Expect = 2.4
 Identities = 25/111 (22%), Positives = 46/111 (41%), Gaps = 6/111 (5%)
 Frame = +2

Query: 173 KVASHLHQEQSYQGLIEQ------ECTINS*QKLILEMLLSISIYGGREQREEHLYECKQ 334
           K   H H E+SY+   E+      EC+     +         S     E+ ++  +EC +
Sbjct: 97  KSGGHCHSEESYERSEEKSHEKSHECSYEKSTE---------SSEVKSEESKQCSHECSK 147

Query: 335 GRQHSSSEHKCNELAYSVDDHRAKMPGKIKGGQLVPEKRTQDAQVDYAQNE 487
            +   SSE K +E +Y   +  +K   ++K  +   EK  +  Q    ++E
Sbjct: 148 EKSTESSEEKSHECSYEKSEEHSKSSSEVKSEEKSKEKSEESKQSSETKSE 198


>tr|B0UAD1|B0UAD1_METS4 Sel1 domain protein repeat-containing
           protein OS=Methylobacterium sp. (strain 4-46)
           GN=M446_1987 PE=4 SV=1
          Length = 505

 Score = 33.5 bits (75), Expect = 5.5
 Identities = 20/58 (34%), Positives = 28/58 (48%)
 Frame = +1

Query: 91  YGKLCMAGEPVGQAKSGFVAIPPKQGA*GSVPSSPGAELPRTHRARVYNKQLAKAYSG 264
           Y +    G+P+GQA++G   +    G     P  P A LP   RA   N+ LA+ Y G
Sbjct: 378 YRRAAEHGDPLGQARTGEALLLGTGG-----PRDPAAALPLLQRAAQQNQPLAQYYLG 430


>tr|Q7PZG9|Q7PZG9_ANOGA AGAP011902-PA (Fragment) OS=Anopheles
           gambiae GN=AGAP011902 PE=4 SV=4
          Length = 678

 Score = 33.5 bits (75), Expect = 5.5
 Identities = 24/64 (37%), Positives = 30/64 (46%), Gaps = 3/64 (4%)
 Frame = -1

Query: 190 KMGRYLKRPVSVGLQQSRSSPGQPAPQPY---IAFHMFALFTQPLGPGCQYAIHLPENPG 20
           K+G    RP++  L++S SS G PA  PY    A HMF       GPG         +PG
Sbjct: 448 KLGITTGRPINRALKRSPSSGGSPASFPYGLSGASHMFG------GPGSGAPGGPGGHPG 501

Query: 19  ASHH 8
             HH
Sbjct: 502 GDHH 505


>tr|B7QNU7|B7QNU7_IXOSC Jnk/sapk-associated protein, putative
           OS=Ixodes scapularis GN=IscW_ISCW015188 PE=4 SV=1
          Length = 723

 Score = 33.5 bits (75), Expect = 5.5
 Identities = 21/71 (29%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
 Frame = +2

Query: 218 IEQECTINS*QKLILEMLLSISIYGGREQREEHLYECKQGRQ-HSSSEHKCNELAYSVDD 394
           ++  C  N   ++ LE+L        RE  E+ + + ++ +Q   +SE K  E+ Y+VDD
Sbjct: 64  LDLACMENQEHEVELELL--------REDNEQLVTQYEREKQLRKASEQKLLEVEYTVDD 115

Query: 395 HRAKMPGKIKG 427
            R  + GK++G
Sbjct: 116 DRRDLEGKVEG 126


>tr|Q7ZZ40|Q7ZZ40_DANRE Novel protein similar to human
           autism-related protein 1 (AUTS2) (Fragment) OS=Danio
           rerio GN=auts2 PE=2 SV=1
          Length = 994

 Score = 32.7 bits (73), Expect = 9.3
 Identities = 23/66 (34%), Positives = 30/66 (45%), Gaps = 12/66 (18%)
 Frame = -1

Query: 172 KRPVSV--------GLQQSRSS----PGQPAPQPYIAFHMFALFTQPLGPGCQYAIHLPE 29
           +RP+S         GL  SRSS    P  P+P P++  H  A    P G    + + L  
Sbjct: 107 QRPISAYSGSLTLNGLSSSRSSTPGKPPGPSPAPHLHHHQPA----PTGASASFPLPLSA 162

Query: 28  NPGASH 11
           NP ASH
Sbjct: 163 NPTASH 168


>tr|A4I4W2|A4I4W2_LEIIN Putative uncharacterized protein
           OS=Leishmania infantum GN=LinJ29.2840 PE=4 SV=1
          Length = 846

 Score = 32.7 bits (73), Expect = 9.3
 Identities = 16/27 (59%), Positives = 18/27 (66%)
 Frame = -1

Query: 184 GRYLKRPVSVGLQQSRSSPGQPAPQPY 104
           GRY  R VS  L QSR +P QPAP P+
Sbjct: 625 GRYRIRRVSPRLLQSRRAPQQPAPPPF 651


>tr|Q6BMY8|Q6BMY8_DEBHA DEHA2F01584p OS=Debaryomyces hansenii
           GN=DEHA2F01584g PE=4 SV=2
          Length = 563

 Score = 32.7 bits (73), Expect = 9.3
 Identities = 25/91 (27%), Positives = 39/91 (42%), Gaps = 2/91 (2%)
 Frame = +2

Query: 221 EQECTINS*QKLILEMLLSISIYGGREQREEHLYE--CKQGRQHSSSEHKCNELAYSVDD 394
           E+ECTI       LE++   S  G  +    + +E    Q   HS+S   C +L Y +D 
Sbjct: 7   EEECTI------CLEVITFASTIGTIKNCHHYYHEDCILQWSSHSNSCPTCRKLFYKIDV 60

Query: 395 HRAKMPGKIKGGQLVPEKRTQDAQVDYAQNE 487
            R   P KI+    + +K   +  +D    E
Sbjct: 61  SRHDEPNKIRKSISIRDKLLPNDAIDQIPQE 91