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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP916416
Clone id YMU001_000087_D12
Library
Length 517
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000087_D12.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
CATAGATTGCATATGCACGGATCTTTCGAAGACGGGTATCAGGCACAAAAGTACTCAAAC
CAAAACCATTTTTCTGATCCTTTGCTATGAGAGAGGCCACAAATTCCACAGACCATGAAG
GGAGCTCTTGGCATTCAAGCTGCCAAGATCTAACGGCCTCCGATAAAAATGTATGTACTA
GGTGAATCTTGTCATTTACAGAACCCTCTCCTTCAAGAGAAAGGAGCTGCTCGAAGCAAT
GCGGCGATACAACAGCAAGATTGTAAGCTGCAATCAAATACCGAGCCTGTGTCTGTGAGT
CGAAGTCAAGTGAGCACAGTACGAGCAGGGAGAGAGCCCTGCATACAAAGGGGGTATGTG
TAGAGGTCGATGCAGCGGCAGCACATTGTGGACTACAGAAGGCAGCTACCTGGCAAGTAG
TGCAAAAGGACCAAGACCCATTTCCGTGAGGGTTGGGGTTAAGGTCAGGCCGCGTGCAGT
GGAAGCAAACGGTGTTCGCCGATGCGGTATGGGCATC
■■Homology search results ■■ -
sp_hit_id Q9ZUM9
Definition sp|Q9ZUM9|ASHR2_ARATH Histone-lysine N-methyltransferase ASHR2 OS=Arabidopsis thaliana
Align length 187
Score (bit) 70.1
E-value 6.0e-12
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP916416|Adiantum capillus-veneris mRNA, clone:
YMU001_000087_D12.
         (517 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9ZUM9|ASHR2_ARATH Histone-lysine N-methyltransferase ASHR2 O...    70   6e-12
sp|P29122|PCSK6_HUMAN Proprotein convertase subtilisin/kexin typ...    32   1.4  
sp|Q9HCM7|AUT2L_HUMAN AUTS2-like protein OS=Homo sapiens GN=AUTS...    32   2.3  
sp|Q9RVZ8|METX_DEIRA Homoserine O-acetyltransferase OS=Deinococc...    31   4.0  
sp|Q4K8M6|MTNA_PSEF5 Methylthioribose-1-phosphate isomerase OS=P...    30   6.7  
sp|Q63415|PCSK6_RAT Proprotein convertase subtilisin/kexin type ...    30   6.8  
sp|Q9FG08|ATXR4_ARATH Histone-lysine N-methyltransferase ATXR4 O...    30   6.8  
sp|P30414|NKTR_HUMAN NK-tumor recognition protein OS=Homo sapien...    30   8.7  

>sp|Q9ZUM9|ASHR2_ARATH Histone-lysine N-methyltransferase ASHR2
           OS=Arabidopsis thaliana GN=ASHR2 PE=2 SV=3
          Length = 398

 Score = 70.1 bits (170), Expect = 6e-12
 Identities = 60/187 (32%), Positives = 84/187 (44%), Gaps = 18/187 (9%)
 Frame = -1

Query: 508 TASANTVCFHCTRPDLNPNPHGNGSWSFCTTCQVXXXXXXXXXXXXSTSTHTPFVCRALS 329
           ++S +  C HC R  L  + H       C +C +              ++HTP++C +L 
Sbjct: 53  SSSVSPYCDHCFRL-LASSAHQK-----CQSCSLVSFCSPNCF-----ASHTPWLCESLR 101

Query: 328 LLVLCSLDF------DSQTQARYLIAAYNLAVVSPHCFEQLLSLEGEGSVND-------- 191
            L   S         D Q QAR+L++AYNLA  SP  F+ LLSL+G GS N         
Sbjct: 102 RLHQSSSSAFSDQPSDRQVQARFLLSAYNLAAASPSDFQILLSLQGSGSSNGDPSCSAGD 161

Query: 190 --KIHLVHTFLSEAVRSWQLECQELP-SWSVEFVASLIAKDQKNGFGL-STFVPDTRLRK 23
                 +H+ LS         C  LP S S +  A+L++KD+ N FGL          R 
Sbjct: 162 SAAAGFLHSLLSSV-------CPSLPVSISPDLTAALLSKDKVNAFGLMEPCSVSNEKRS 214

Query: 22  IRAYAIY 2
           +RAY IY
Sbjct: 215 VRAYGIY 221


>sp|P29122|PCSK6_HUMAN Proprotein convertase subtilisin/kexin type 6
           OS=Homo sapiens GN=PCSK6 PE=1 SV=1
          Length = 969

 Score = 32.3 bits (72), Expect = 1.4
 Identities = 16/39 (41%), Positives = 22/39 (56%)
 Frame = -1

Query: 232 EQLLSLEGEGSVNDKIHLVHTFLSEAVRSWQLECQELPS 116
           ++LL L  EG  N +   VH +  +A   W LE Q+LPS
Sbjct: 573 KRLLDLSNEGFTNWEFMTVHCWGEKAEGQWTLEIQDLPS 611


>sp|Q9HCM7|AUT2L_HUMAN AUTS2-like protein OS=Homo sapiens GN=AUTS2L
           PE=2 SV=3
          Length = 972

 Score = 31.6 bits (70), Expect = 2.3
 Identities = 20/73 (27%), Positives = 30/73 (41%)
 Frame = -2

Query: 513 PIPHRRTPFASTARGLTLTPTLTEMGLGPFALLAR*LPSVVHNVXXXXXXXXXXXLYAGL 334
           P PHR TP     +   L PT     LG FA  ++   + +H +            +  L
Sbjct: 219 PAPHRHTPQPPPPQPRGLLPTHVPASLGAFAGHSQAAANGLHGLSRSSSAPLGLGKHVSL 278

Query: 333 SPCSYCAHLTSTH 295
           SP     HL+++H
Sbjct: 279 SPHGPGPHLSTSH 291


>sp|Q9RVZ8|METX_DEIRA Homoserine O-acetyltransferase OS=Deinococcus
           radiodurans GN=metX PE=3 SV=1
          Length = 334

 Score = 30.8 bits (68), Expect = 4.0
 Identities = 17/46 (36%), Positives = 27/46 (58%)
 Frame = +2

Query: 365 GRCSGSTLWTTEGSYLASSAKGPRPISVRVGVKVRPRAVEANGVRR 502
           G C+G    TT  + LA++  GP P+S+R   +V    +++ GVRR
Sbjct: 100 GGCAG----TTSAAELAATCSGPVPLSLRDMARVGRALLDSLGVRR 141


>sp|Q4K8M6|MTNA_PSEF5 Methylthioribose-1-phosphate isomerase
           OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477)
           GN=mtnA PE=3 SV=1
          Length = 358

 Score = 30.0 bits (66), Expect = 6.7
 Identities = 18/38 (47%), Positives = 20/38 (52%)
 Frame = +3

Query: 321 TSRERALHTKGVCVEVDAAAAHCGLQKAATWQVVQKDQ 434
           T+ E A     V V VDAAAAH    K  TW VV  D+
Sbjct: 210 TAWELASEGIPVTVNVDAAAAHIMKTKGVTWVVVGADR 247


>sp|Q63415|PCSK6_RAT Proprotein convertase subtilisin/kexin type 6
           OS=Rattus norvegicus GN=Pcsk6 PE=2 SV=1
          Length = 937

 Score = 30.0 bits (66), Expect = 6.8
 Identities = 14/39 (35%), Positives = 21/39 (53%)
 Frame = -1

Query: 232 EQLLSLEGEGSVNDKIHLVHTFLSEAVRSWQLECQELPS 116
           ++LL    EG  N +   VH +  +A   W LE Q++PS
Sbjct: 554 KRLLDFSNEGFTNWEFMTVHCWGEKAEGEWTLEVQDIPS 592


>sp|Q9FG08|ATXR4_ARATH Histone-lysine N-methyltransferase ATXR4
           OS=Arabidopsis thaliana GN=ATXR4 PE=3 SV=1
          Length = 258

 Score = 30.0 bits (66), Expect = 6.8
 Identities = 17/45 (37%), Positives = 26/45 (57%), Gaps = 5/45 (11%)
 Frame = -1

Query: 286 ARYLIAAYNLAVVSPHCFEQLLSL-----EGEGSVNDKIHLVHTF 167
           AR  I A+ + +V   C E LLSL     EGEG+V   ++++ +F
Sbjct: 146 ARIRINAFRIDLVGGSCGEDLLSLAAASVEGEGAVGHAVYMLPSF 190


>sp|P30414|NKTR_HUMAN NK-tumor recognition protein OS=Homo sapiens
           GN=NKTR PE=1 SV=2
          Length = 1462

 Score = 29.6 bits (65), Expect = 8.7
 Identities = 24/72 (33%), Positives = 34/72 (47%)
 Frame = +3

Query: 123 SSWHSSCQDLTASDKNVCTR*ILSFTEPSPSRERSCSKQCGDTTARL*AAIKYRACVCES 302
           SS HSS +D + SDK+V +    S  +   S+  S S   G + +R             S
Sbjct: 491 SSHHSSKRDWSKSDKDVQSSLTHSSRDSYRSKSHSQSYSRGSSRSR-----------TAS 539

Query: 303 KSSEHSTSRERA 338
           KSS HS SR ++
Sbjct: 540 KSSSHSRSRSKS 551
tr_hit_id A5AFY3
Definition tr|A5AFY3|A5AFY3_VITVI Putative uncharacterized protein OS=Vitis vinifera
Align length 132
Score (bit) 73.9
E-value 4.0e-12
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP916416|Adiantum capillus-veneris mRNA, clone:
YMU001_000087_D12.
         (517 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A5AFY3|A5AFY3_VITVI Putative uncharacterized protein OS=Vitis...    74   4e-12
tr|A9TLI8|A9TLI8_PHYPA Predicted protein (Fragment) OS=Physcomit...    65   2e-09
tr|Q6ZCF6|Q6ZCF6_ORYSJ SET-domain transcriptional regulator-like...    35   2.2  
tr|B4LNY9|B4LNY9_DROVI GJ21880 OS=Drosophila virilis GN=GJ21880 ...    35   2.2  
tr|A2YSB4|A2YSB4_ORYSI Putative uncharacterized protein OS=Oryza...    35   2.9  
tr|B4KMC6|B4KMC6_DROMO GI18846 OS=Drosophila mojavensis GN=GI188...    34   3.8  
tr|Q8KIP0|Q8KIP0_RHIEC Carbamoyltransferase protein OS=Rhizobium...    33   6.5  

>tr|A5AFY3|A5AFY3_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_031337 PE=4 SV=1
          Length = 405

 Score = 73.9 bits (180), Expect = 4e-12
 Identities = 53/132 (40%), Positives = 71/132 (53%), Gaps = 10/132 (7%)
 Frame = -1

Query: 367 TSTHTPFVCRALSLL----VLCSLDFDSQTQARYLIAAYNLAVVSPHCFEQLLSLEG--- 209
           +S+H+P+ C  LSLL     L     + Q QAR+L+AAYNLA+VSP  F  LLSL+G   
Sbjct: 94  SSSHSPWACLTLSLLRASPSLSLSHSERQVQARFLVAAYNLAIVSPSHFHILLSLQGMAL 153

Query: 208 EGSVNDKIHLVHTFLSEAVRSWQLECQELPSWSVEFVASLIAKDQKNGFGL---STFVPD 38
             S +D    +H+ LS          Q +  +SVE   +L+AKD+ N FGL       P 
Sbjct: 154 PSSDSDAPTFLHSLLSSLSPP-----QGVAGFSVELTTALLAKDKLNAFGLMEPPALAPG 208

Query: 37  TRLRKIRAYAIY 2
              R +RAY IY
Sbjct: 209 GE-RSVRAYGIY 219


>tr|A9TLI8|A9TLI8_PHYPA Predicted protein (Fragment)
           OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_4377 PE=4 SV=1
          Length = 377

 Score = 65.1 bits (157), Expect = 2e-09
 Identities = 51/178 (28%), Positives = 77/178 (43%), Gaps = 6/178 (3%)
 Frame = -1

Query: 517 DAHTASANTVCFHCTR----PDLNPNPHGNGSWSFCTTCQVXXXXXXXXXXXXSTSTHTP 350
           +A +A +   C +C R    P     P        C+ C                 +H  
Sbjct: 36  EAESAESTAFCSNCMRVLSLPGREKVP--------CSACDGATFCGKSCFESARVGSHNT 87

Query: 349 FVCRALSLLVLCSLDF--DSQTQARYLIAAYNLAVVSPHCFEQLLSLEGEGSVNDKIHLV 176
            VC  +++L      F  + +T AR+LIAAYNLAV  P  F +LL LEG+    + +  +
Sbjct: 88  RVCSGIAMLQKSKDKFSLEHRTLARFLIAAYNLAVEDPLAFAKLLELEGQECDEEVVKSL 147

Query: 175 HTFLSEAVRSWQLECQELPSWSVEFVASLIAKDQKNGFGLSTFVPDTRLRKIRAYAIY 2
           H F+ E     +L+       S+E    L+A+D  N FGL         RK+R YA++
Sbjct: 148 HDFVVEIF--GKLDGGASLELSLELTGKLLARDACNTFGLMAPSCAGEERKVRGYAMF 203


>tr|Q6ZCF6|Q6ZCF6_ORYSJ SET-domain transcriptional regulator-like
           protein (Putative uncharacterized protein) OS=Oryza
           sativa subsp. japonica GN=P0486F07.32-2 PE=4 SV=1
          Length = 392

 Score = 35.0 bits (79), Expect = 2.2
 Identities = 35/128 (27%), Positives = 56/128 (43%), Gaps = 7/128 (5%)
 Frame = -1

Query: 364 STHTPFVCRALS----LLVLCSLDFDSQTQARYLIAAYNLAVVSPHCFEQLLSLEGEGSV 197
           ++H   +C ALS       L S     Q    +L++AY+L   S      L S       
Sbjct: 80  ASHPRLLCTALSGGGGNGNLASAAEPHQEPLLFLLSAYSLPEPSLRVLLSLSSAATPPPS 139

Query: 196 NDKIHLVHTFLSEAVRSWQLECQELPSWSVEFVASLIAKDQKNGFG-LSTFVPDT--RLR 26
           +     +H  ++  V    L     P +S +  A+L++KD+ N F  +  + P+    LR
Sbjct: 140 DQDPGSLHAMVAALVPPQMLP----PGFSPDLTAALLSKDRTNSFSIMEPYRPEVPQPLR 195

Query: 25  KIRAYAIY 2
           K RAYA+Y
Sbjct: 196 KARAYAVY 203


>tr|B4LNY9|B4LNY9_DROVI GJ21880 OS=Drosophila virilis GN=GJ21880
           PE=4 SV=1
          Length = 1458

 Score = 35.0 bits (79), Expect = 2.2
 Identities = 13/24 (54%), Positives = 15/24 (62%)
 Frame = -1

Query: 481 HCTRPDLNPNPHGNGSWSFCTTCQ 410
           +C +P L   PHGN   SFCT CQ
Sbjct: 608 YCVKPPLETVPHGNWKCSFCTICQ 631


>tr|A2YSB4|A2YSB4_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_28216 PE=4 SV=1
          Length = 392

 Score = 34.7 bits (78), Expect = 2.9
 Identities = 35/128 (27%), Positives = 56/128 (43%), Gaps = 7/128 (5%)
 Frame = -1

Query: 364 STHTPFVCRALS----LLVLCSLDFDSQTQARYLIAAYNLAVVSPHCFEQLLSLEGEGSV 197
           ++H   +C ALS       L S     Q    +L++AY+L   S      L S       
Sbjct: 80  ASHPRLLCTALSGGGGNGNLASAAEPHQEPLLFLLSAYSLPEPSLRVLLSLSSAATPPPR 139

Query: 196 NDKIHLVHTFLSEAVRSWQLECQELPSWSVEFVASLIAKDQKNGFG-LSTFVPDT--RLR 26
           +     +H  ++  V    L     P +S +  A+L++KD+ N F  +  + P+    LR
Sbjct: 140 DQDPGSLHAMVTALVPPQMLP----PGFSPDLTAALLSKDRTNSFSIMEPYRPEVPQPLR 195

Query: 25  KIRAYAIY 2
           K RAYA+Y
Sbjct: 196 KARAYAVY 203


>tr|B4KMC6|B4KMC6_DROMO GI18846 OS=Drosophila mojavensis GN=GI18846
           PE=4 SV=1
          Length = 1465

 Score = 34.3 bits (77), Expect = 3.8
 Identities = 13/24 (54%), Positives = 14/24 (58%)
 Frame = -1

Query: 481 HCTRPDLNPNPHGNGSWSFCTTCQ 410
           +C  P L   PHGN   SFCT CQ
Sbjct: 609 YCVNPPLETVPHGNWKCSFCTICQ 632


>tr|Q8KIP0|Q8KIP0_RHIEC Carbamoyltransferase protein OS=Rhizobium
           etli (strain CFN 42 / ATCC 51251) GN=RHE_PD00268 PE=4
           SV=2
          Length = 685

 Score = 33.5 bits (75), Expect = 6.5
 Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 7/47 (14%)
 Frame = -1

Query: 250 VSPHCFEQLLSLEGEGSVNDKIHLV-------HTFLSEAVRSWQLEC 131
           +SP  FEQL+ +EGE  V D +  +        TFL+E  + W+  C
Sbjct: 612 ISPELFEQLIRIEGEALVGDILDGIAPVSGSRETFLNELRQIWEQRC 658