BP916429
Clone id YMU001_000087_F01
Library
Length 330
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000087_F01.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
GTGATGTGAGTCAACTATGTTGAAGCTGTCTTTGAACTCCCCATGACTCAACTTGAGTAT
TGCCTCCGCTATGCCAAAACTTGGGATTGGTGTTTTGGCACTGGTGTATACTCTTTCCTC
CACTTCTTTAATTGTCTGCTTTCCCATCATTATCCAAGTGCCATATGACATTATATTCTT
AGTAGCATAAGGATCAATTGCGGCCGAACATGTAACCTTGAGCCCTGTTTGTCCACAAAA
ATTGAATTTGATTAATGTGGGATATTTTTCATCTTTGGCTTCTTCCTCATTCTTCCTTTG
ATCTTGAGTTTGTAGAACATCTATTGATGT
■■Homology search results ■■ -
sp_hit_id Q9V0P2
Definition sp|Q9V0P2|PYRH_PYRAB Uridylate kinase OS=Pyrococcus abyssi
Align length 70
Score (bit) 33.5
E-value 0.34
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP916429|Adiantum capillus-veneris mRNA, clone:
YMU001_000087_F01.
(330 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q9V0P2|PYRH_PYRAB Uridylate kinase OS=Pyrococcus abyssi GN=py... 33 0.34
sp|A4FZB7|PYRH_METM5 Uridylate kinase OS=Methanococcus maripalud... 33 0.34
sp|A6VJ20|PYRH_METM7 Uridylate kinase OS=Methanococcus maripalud... 33 0.45
sp|Q8VCR7|ABHEB_MOUSE Abhydrolase domain-containing protein 14B ... 31 2.2
sp|O50116|PYRH_PYRHO Uridylate kinase OS=Pyrococcus horikoshii G... 30 2.9
sp|Q9JXZ9|NRDR_NEIMB Transcriptional repressor nrdR OS=Neisseria... 30 2.9
sp|Q9JVW7|NRDR_NEIMA Transcriptional repressor nrdR OS=Neisseria... 30 2.9
sp|P20302|APRP_ENTHI Antigenic protein P1 (Fragment) OS=Entamoeb... 30 3.8
sp|A6UQ77|PURA_METVS Adenylosuccinate synthetase OS=Methanococcu... 29 6.4

>sp|Q9V0P2|PYRH_PYRAB Uridylate kinase OS=Pyrococcus abyssi GN=pyrH
PE=3 SV=1
Length = 225

Score = 33.5 bits (75), Expect = 0.34
Identities = 22/70 (31%), Positives = 32/70 (45%), Gaps = 2/70 (2%)
Frame = -1

Query: 330 TSIDVLQTQDQRKNEEEAKDEKYPTLIKFNFCGQTGLKVTCSAAIDPYATKNIMSYG--T 157
T++D + T D RKN K EK G++ K S IDP A I+ G T
Sbjct: 140 TNVDGVYTDDPRKNPNAKKLEKISARELVQIVGKSTSKAGASTVIDPLAASIILRSGIKT 199

Query: 156 WIMMGKQTIK 127
+I+ K ++
Sbjct: 200 YIIGKKDALR 209


>sp|A4FZB7|PYRH_METM5 Uridylate kinase OS=Methanococcus maripaludis
(strain C5 / ATCC BAA-1333) GN=pyrH PE=3 SV=1
Length = 225

Score = 33.5 bits (75), Expect = 0.34
Identities = 17/53 (32%), Positives = 27/53 (50%)
Frame = -1

Query: 330 TSIDVLQTQDQRKNEEEAKDEKYPTLIKFNFCGQTGLKVTCSAAIDPYATKNI 172
T++D + T+D R NE+ K +K T G + + S +DP A+K I
Sbjct: 141 TNVDGVYTKDPRCNEDAVKLDKINTKELLEITGSSSMSAGSSGVVDPLASKII 193


>sp|A6VJ20|PYRH_METM7 Uridylate kinase OS=Methanococcus maripaludis
(strain C7 / ATCC BAA-1331) GN=pyrH PE=3 SV=1
Length = 225

Score = 33.1 bits (74), Expect = 0.45
Identities = 17/53 (32%), Positives = 26/53 (49%)
Frame = -1

Query: 330 TSIDVLQTQDQRKNEEEAKDEKYPTLIKFNFCGQTGLKVTCSAAIDPYATKNI 172
T++D + T+D R NE+ K +K T G + S +DP A+K I
Sbjct: 141 TNVDGVYTKDPRCNEDAVKLDKINTKELLEITGSNSMSAGSSGVVDPLASKII 193


>sp|Q8VCR7|ABHEB_MOUSE Abhydrolase domain-containing protein 14B
OS=Mus musculus GN=Abhd14b PE=2 SV=1
Length = 210

Score = 30.8 bits (68), Expect = 2.2
Identities = 20/61 (32%), Positives = 32/61 (52%)
Frame = +2

Query: 74 PKLGIGVLALVYTLSSTSLIVCFPIIIQVPYDIIFLVA*GSIAAEHVTLSPVCPQKLNLI 253
P G + A+V TL +V P + + Y + FLVA GS V ++P+C K+N +
Sbjct: 87 PAPGSFLAAVVDTLELGPPVVISPSLSGM-YSLPFLVAPGSQLRGFVPVAPICTDKINAV 145

Query: 254 N 256
+
Sbjct: 146 D 146


>sp|O50116|PYRH_PYRHO Uridylate kinase OS=Pyrococcus horikoshii
GN=pyrH PE=3 SV=2
Length = 225

Score = 30.4 bits (67), Expect = 2.9
Identities = 20/70 (28%), Positives = 32/70 (45%), Gaps = 2/70 (2%)
Frame = -1

Query: 330 TSIDVLQTQDQRKNEEEAKDEKYPTLIKFNFCGQTGLKVTCSAAIDPYATKNIMSYG--T 157
T++D + T+D +KN K K + + K S IDP A K IM G T
Sbjct: 140 TNVDGVYTEDPKKNPNAKKIPKMKAKDLVDIVSREAGKAGVSTVIDPLAAKIIMRSGIKT 199

Query: 156 WIMMGKQTIK 127
+++ + +K
Sbjct: 200 YVIGKEDALK 209


>sp|Q9JXZ9|NRDR_NEIMB Transcriptional repressor nrdR OS=Neisseria
meningitidis serogroup B GN=nrdR PE=3 SV=1
Length = 154

Score = 30.4 bits (67), Expect = 2.9
Identities = 12/29 (41%), Positives = 20/29 (68%)
Frame = -1

Query: 138 QTIKEVEERVYTSAKTPIPSFGIAEAILK 52
+T++ E R+YTS + IPS +A+ +LK
Sbjct: 86 ETVRLTEHRLYTSGQRDIPSAALADMVLK 114


>sp|Q9JVW7|NRDR_NEIMA Transcriptional repressor nrdR OS=Neisseria
meningitidis serogroup A GN=nrdR PE=3 SV=1
Length = 154

Score = 30.4 bits (67), Expect = 2.9
Identities = 12/29 (41%), Positives = 20/29 (68%)
Frame = -1

Query: 138 QTIKEVEERVYTSAKTPIPSFGIAEAILK 52
+T++ E R+YTS + IPS +A+ +LK
Sbjct: 86 ETVRLTEHRLYTSGQRDIPSAALADMVLK 114


>sp|P20302|APRP_ENTHI Antigenic protein P1 (Fragment) OS=Entamoeba
histolytica PE=4 SV=1
Length = 639

Score = 30.0 bits (66), Expect = 3.8
Identities = 21/57 (36%), Positives = 29/57 (50%)
Frame = -1

Query: 234 GQTGLKVTCSAAIDPYATKNIMSYGTWIMMGKQTIKEVEERVYTSAKTPIPSFGIAE 64
G+T L T + +IDP AT +SY + K ++ VE+ VY P FGI E
Sbjct: 385 GRTRLNFTATCSIDPKATS--VSYTIKSGLTKGKLERVEDNVYDYT----PFFGIEE 435


>sp|A6UQ77|PURA_METVS Adenylosuccinate synthetase OS=Methanococcus
vannielii (strain SB / ATCC 35089 / DSM 1224) GN=purA
PE=3 SV=1
Length = 338

Score = 29.3 bits (64), Expect = 6.4
Identities = 17/42 (40%), Positives = 21/42 (50%)
Frame = -1

Query: 234 GQTGLKVTCSAAIDPYATKNIMSYGTWIMMGKQTIKEVEERV 109
G T + +TC DP I+ Y GK IKEVEE+V
Sbjct: 276 GATQIAITCLDKYDPLCY-GIIDYNELSEKGKAFIKEVEEKV 316


tr_hit_id A1CA04
Definition tr|A1CA04|A1CA04_ASPCL Putative uncharacterized protein OS=Aspergillus clavatus
Align length 74
Score (bit) 38.5
E-value 0.17
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP916429|Adiantum capillus-veneris mRNA, clone:
YMU001_000087_F01.
(330 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A1CA04|A1CA04_ASPCL Putative uncharacterized protein OS=Asper... 39 0.17
tr|Q3ST80|Q3ST80_NITWN Resolvase OS=Nitrobacter winogradskyi (st... 35 2.5
tr|A7RMK9|A7RMK9_NEMVE Predicted protein OS=Nematostella vectens... 34 4.2
tr|A8KB17|A8KB17_DANRE Zgc:171453 protein OS=Danio rerio GN=zgc:... 33 5.5
tr|B5LBL0|B5LBL0_STRPN Putative phosphotransferase LicD3 OS=Stre... 33 9.4

>tr|A1CA04|A1CA04_ASPCL Putative uncharacterized protein
OS=Aspergillus clavatus GN=ACLA_009950 PE=4 SV=1
Length = 874

Score = 38.5 bits (88), Expect = 0.17
Identities = 24/74 (32%), Positives = 37/74 (50%), Gaps = 2/74 (2%)
Frame = -1

Query: 258 TLIKFNFCGQTGLKVTCSAAIDPYATKNIMSYGTWIMMGKQTIKEVE--ERVYTSAKTPI 85
T I+ G TCS A++ Y K+ MSY W++ G I + +R +T ++ I
Sbjct: 185 TTIEDEVDGNENDNATCSMALETYLEKSQMSYEVWLLRGYSNIYDDTNLQRAHTE-ESDI 243

Query: 84 PSFGIAEAILKLSH 43
FGI ++ K SH
Sbjct: 244 DEFGILKSNYKRSH 257


>tr|Q3ST80|Q3ST80_NITWN Resolvase OS=Nitrobacter winogradskyi
(strain Nb-255 / ATCC 25391) GN=Nwi_1250 PE=4 SV=1
Length = 524

Score = 34.7 bits (78), Expect = 2.5
Identities = 21/88 (23%), Positives = 38/88 (43%), Gaps = 6/88 (6%)
Frame = -1

Query: 324 IDVLQTQDQRKNEEEAKDEKYPTLIKFNFCGQTGLKVTCSAAIDPYATKNIMSYGTWIMM 145
ID L + ++ +E+A+ +PT + TG A+DP + W
Sbjct: 145 IDNLSEEARKGQQEKAEQGIWPTKTPLGYRNVTGADGRKVIAVDPQVAPIVAKLFEWYAT 204

Query: 144 GKQTIKEVEER------VYTSAKTPIPS 79
G+ +KEV ++ VY + P+P+
Sbjct: 205 GEFALKEVAKKARAAGLVYKKSGAPVPT 232


>tr|A7RMK9|A7RMK9_NEMVE Predicted protein OS=Nematostella vectensis
GN=v1g199320 PE=4 SV=1
Length = 867

Score = 33.9 bits (76), Expect = 4.2
Identities = 20/69 (28%), Positives = 34/69 (49%), Gaps = 5/69 (7%)
Frame = -1

Query: 300 QRKNEEEAKDEKYPTLIKFNFCGQTGLKVTCSAAIDPYATK----NIMSYGTWI-MMGKQ 136
QR + D Y +++ +CG G+ VTCSA + + K IM + TW+ + G+
Sbjct: 418 QRSWRGSSIDRYYLCVVRQVWCGGFGVIVTCSATLHSFDVKKLAERIMHFPTWVDLKGQD 477

Query: 135 TIKEVEERV 109
++ E V
Sbjct: 478 SVPETVHHV 486


>tr|A8KB17|A8KB17_DANRE Zgc:171453 protein OS=Danio rerio
GN=zgc:171453 PE=2 SV=1
Length = 289

Score = 33.5 bits (75), Expect = 5.5
Identities = 19/66 (28%), Positives = 31/66 (46%)
Frame = -1

Query: 294 KNEEEAKDEKYPTLIKFNFCGQTGLKVTCSAAIDPYATKNIMSYGTWIMMGKQTIKEVEE 115
+N A D T +K+ G++GL+V+C + GTW+ G Q E+ E
Sbjct: 53 QNMPSAGDHCLKTGMKYRNLGKSGLRVSC------------LGLGTWVTFGGQITDEIAE 100

Query: 114 RVYTSA 97
++ T A
Sbjct: 101 QLMTLA 106


>tr|B5LBL0|B5LBL0_STRPN Putative phosphotransferase LicD3
OS=Streptococcus pneumoniae GN=licD3 PE=4 SV=1
Length = 278

Score = 32.7 bits (73), Expect = 9.4
Identities = 25/89 (28%), Positives = 41/89 (46%)
Frame = -1

Query: 327 SIDVLQTQDQRKNEEEAKDEKYPTLIKFNFCGQTGLKVTCSAAIDPYATKNIMSYGTWIM 148
++DVL KN E K + LI FC QT P +M +G+ I+
Sbjct: 116 ALDVLPLDYYPKNPAERKKQVRWALIYSLFCAQT----------IPEKHGAVMKWGSRIL 165

Query: 147 MGKQTIKEVEERVYTSAKTPIPSFGIAEA 61
+G T K + R++ A+ + +G+AE+
Sbjct: 166 LG-LTPKSLRYRIWKKAEKEMTKYGLAES 193