BP916439 |
Clone id |
YMU001_000087_F11 |
Library |
YMU01 |
Length |
432 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000087_F11. |
Accession |
BP916439 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL1561Contig1 |
Sequence |
TGACAAGGCAGTGTGTACCATTAATGAAGTGCCAAATTCTGACAAGCTTATCCTATGCTC AGTGCTGTTGGGTGCTTGTCAAAAAGGAGCCAACTTGGAGCTCGGACGATGGGTCTTTGA GCGTGCTCTACATTTGGATGACCAGTTTGCTGCAGGGTATGTCTATATGAGTAATATTTA TGCTGACGCGGACAGGCAAGAGGAAATGGGCAAGTTTCAAGCTTTTGGAAGTGAAGATTA GAGTGTGGAGAATATAGCTTGAGTGATCTATCCTCAATGCCATATGCATTCAGAGTGATA GGGGAGCTTTTTGCATGTTGACCACACGCAATATGTTGAGGAAGGCCTCTATTGAGCATC ACAGGTGGTGGTAGGTCCTTAATGCCGACACATTAAGAAGCTGGCTATTGCATGTGTTTT TGGTTACCATCT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9M4P3 |
Definition |
sp|Q9M4P3|PP316_ARATH Pentatricopeptide repeat-containing protein At4g16835, mitochondrial OS=Arabidopsis thaliana |
Align length |
71 |
Score (bit) |
52.0 |
E-value |
1.0e-06 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q6F382 |
Definition |
tr|Q6F382|Q6F382_ORYSJ Os03g0795200 protein OS=Oryza sativa subsp. japonica |
Align length |
78 |
Score (bit) |
54.3 |
E-value |
3.0e-06 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP916439|Adiantum capillus-veneris mRNA, clone: YMU001_000087_F11. (432 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q6F382|Q6F382_ORYSJ Os03g0795200 protein OS=Oryza sativa subs... 54 3e-06 tr|A3ANL0|A3ANL0_ORYSJ Putative uncharacterized protein OS=Oryza... 54 3e-06 tr|A2XMV7|A2XMV7_ORYSI Putative uncharacterized protein OS=Oryza... 54 3e-06 tr|B4F908|B4F908_MAIZE Putative uncharacterized protein OS=Zea m... 53 9e-06 tr|A7PRQ2|A7PRQ2_VITVI Chromosome chr14 scaffold_27, whole genom... 52 2e-05 tr|A5BN40|A5BN40_VITVI Putative uncharacterized protein OS=Vitis... 52 2e-05 tr|Q6ASQ9|Q6ASQ9_ORYSJ Os05g0147600 protein OS=Oryza sativa subs... 51 3e-05 tr|A3AZY4|A3AZY4_ORYSJ Putative uncharacterized protein OS=Oryza... 51 3e-05 tr|A7QUQ9|A7QUQ9_VITVI Chromosome chr1 scaffold_180, whole genom... 50 4e-05 tr|Q75LD1|Q75LD1_ORYSJ Os03g0844000 protein OS=Oryza sativa subs... 50 6e-05 tr|Q10AR1|Q10AR1_ORYSJ Pentatricopeptide, putative, expressed OS... 50 6e-05 tr|B8AN81|B8AN81_ORYSI Putative uncharacterized protein OS=Oryza... 50 6e-05 tr|A3APN2|A3APN2_ORYSJ Putative uncharacterized protein OS=Oryza... 50 6e-05 tr|B3U1U2|B3U1U2_ISOEN Pentatricopeptide repeat protein (Fragmen... 50 7e-05 tr|A7R1A1|A7R1A1_VITVI Chromosome undetermined scaffold_342, who... 50 7e-05 tr|A7PDX6|A7PDX6_VITVI Chromosome chr11 scaffold_13, whole genom... 50 7e-05 tr|A5BIR2|A5BIR2_VITVI Putative uncharacterized protein OS=Vitis... 50 7e-05 tr|A2Y0D6|A2Y0D6_ORYSI Putative uncharacterized protein OS=Oryza... 50 7e-05 tr|Q75IC8|Q75IC8_ORYSJ Putative pentatricopeptide repeat contain... 49 1e-04 tr|Q0DQL5|Q0DQL5_ORYSJ Os03g0582100 protein OS=Oryza sativa subs... 49 1e-04 tr|A7Q306|A7Q306_VITVI Chromosome chr12 scaffold_47, whole genom... 49 1e-04 tr|A5AWQ4|A5AWQ4_VITVI Putative uncharacterized protein OS=Vitis... 49 1e-04 tr|A3AJW2|A3AJW2_ORYSJ Putative uncharacterized protein OS=Oryza... 49 1e-04 tr|A2XIW4|A2XIW4_ORYSI Putative uncharacterized protein OS=Oryza... 49 1e-04 tr|Q6L4I3|Q6L4I3_ORYSJ Os05g0212100 protein OS=Oryza sativa subs... 49 1e-04 tr|B4FZF5|B4FZF5_MAIZE Putative uncharacterized protein OS=Zea m... 49 1e-04 tr|A7R0F5|A7R0F5_VITVI Chromosome undetermined scaffold_306, who... 49 1e-04 tr|Q67X36|Q67X36_ORYSJ Os06g0231400 protein OS=Oryza sativa subs... 49 2e-04 tr|A9P0W0|A9P0W0_PICSI Putative uncharacterized protein OS=Picea... 49 2e-04 tr|A7R4G1|A7R4G1_VITVI Chromosome undetermined scaffold_682, who... 49 2e-04
>tr|Q6F382|Q6F382_ORYSJ Os03g0795200 protein OS=Oryza sativa subsp. japonica GN=OSJNBb0021G19.15 PE=4 SV=1 Length = 611
Score = 54.3 bits (129), Expect = 3e-06 Identities = 30/78 (38%), Positives = 42/78 (53%) Frame = +2
Query: 2 DKAVCTINEVPNSDKLILCSVLLGACQKGANLELGRWVFERALHLDDQFAAGYVYMSNIY 181 ++A I+E+P IL LL AC ++++G+ VFER L LDD YV SN+ Sbjct: 392 ERAYKFIDELPIKPTAILWRTLLSACAGHGDVDMGKRVFERILELDDSHGGDYVIFSNLC 451
Query: 182 ADADRQEEMGKFQAFGSE 235 A+ R EEM + SE Sbjct: 452 ANTGRWEEMNMVRKLMSE 469
>tr|A3ANL0|A3ANL0_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_012382 PE=4 SV=1 Length = 611
Score = 54.3 bits (129), Expect = 3e-06 Identities = 30/78 (38%), Positives = 42/78 (53%) Frame = +2
Query: 2 DKAVCTINEVPNSDKLILCSVLLGACQKGANLELGRWVFERALHLDDQFAAGYVYMSNIY 181 ++A I+E+P IL LL AC ++++G+ VFER L LDD YV SN+ Sbjct: 392 ERAYKFIDELPIKPTAILWRTLLSACAGHGDVDMGKRVFERILELDDSHGGDYVIFSNLC 451
Query: 182 ADADRQEEMGKFQAFGSE 235 A+ R EEM + SE Sbjct: 452 ANTGRWEEMNMVRKLMSE 469
>tr|A2XMV7|A2XMV7_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_13880 PE=4 SV=1 Length = 671
Score = 54.3 bits (129), Expect = 3e-06 Identities = 30/78 (38%), Positives = 42/78 (53%) Frame = +2
Query: 2 DKAVCTINEVPNSDKLILCSVLLGACQKGANLELGRWVFERALHLDDQFAAGYVYMSNIY 181 ++A I+E+P IL LL AC ++++G+ VFER L LDD YV SN+ Sbjct: 392 ERAYKFIDELPIKPTAILWRTLLSACAGHGDVDMGKRVFERILELDDSHGGDYVIFSNLC 451
Query: 182 ADADRQEEMGKFQAFGSE 235 A+ R EEM + SE Sbjct: 452 ANTGRWEEMNMVRKLMSE 469
>tr|B4F908|B4F908_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 606
Score = 52.8 bits (125), Expect = 9e-06 Identities = 30/78 (38%), Positives = 43/78 (55%) Frame = +2
Query: 2 DKAVCTINEVPNSDKLILCSVLLGACQKGANLELGRWVFERALHLDDQFAAGYVYMSNIY 181 ++A I+E+P + IL LL AC ++ELG+ VFER L LDD YV SN+ Sbjct: 387 ERAYKFIDELPINPTPILWRTLLSACGGHGDVELGKRVFERILELDDSHGGDYVIFSNLC 446
Query: 182 ADADRQEEMGKFQAFGSE 235 A+ EEM + + S+ Sbjct: 447 ANTGYWEEMNRVRKLMSD 464
>tr|A7PRQ2|A7PRQ2_VITVI Chromosome chr14 scaffold_27, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00022590001 PE=4 SV=1 Length = 672
Score = 51.6 bits (122), Expect = 2e-05 Identities = 27/72 (37%), Positives = 40/72 (55%) Frame = +2
Query: 20 INEVPNSDKLILCSVLLGACQKGANLELGRWVFERALHLDDQFAAGYVYMSNIYADADRQ 199 ++ +P + LLGAC+K N+ELG V + L L+ Q + Y +SNIYA A R Sbjct: 459 VSSIPTEPTPAVWGALLGACRKHGNVELGERVGKILLELEPQNSGRYTLLSNIYAKAGRW 518
Query: 200 EEMGKFQAFGSE 235 EE+G+ + E Sbjct: 519 EEVGEVRKLMKE 530
>tr|A5BN40|A5BN40_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_030555 PE=4 SV=1 Length = 673
Score = 51.6 bits (122), Expect = 2e-05 Identities = 27/72 (37%), Positives = 40/72 (55%) Frame = +2
Query: 20 INEVPNSDKLILCSVLLGACQKGANLELGRWVFERALHLDDQFAAGYVYMSNIYADADRQ 199 ++ +P + LLGAC+K N+ELG V + L L+ Q + Y +SNIYA A R Sbjct: 460 VSSIPTEPTPAVWGALLGACRKHGNVELGERVGKILLELEPQNSGRYTLLSNIYAKAGRW 519
Query: 200 EEMGKFQAFGSE 235 EE+G+ + E Sbjct: 520 EEVGEVRKLMKE 531
>tr|Q6ASQ9|Q6ASQ9_ORYSJ Os05g0147600 protein OS=Oryza sativa subsp. japonica GN=OSJNBa0077J22.13 PE=4 SV=1 Length = 207
Score = 51.2 bits (121), Expect = 3e-05 Identities = 28/78 (35%), Positives = 40/78 (51%) Frame = +2
Query: 2 DKAVCTINEVPNSDKLILCSVLLGACQKGANLELGRWVFERALHLDDQFAAGYVYMSNIY 181 D A I + P +D +L L+GAC N E+G++ E+ L LD A YV +SNIY Sbjct: 94 DDAKSFIEDGPFTDNALLWQALMGACSFHGNSEVGKYAAEKLLLLDPSCTAAYVLLSNIY 153
Query: 182 ADADRQEEMGKFQAFGSE 235 + R ++ K SE Sbjct: 154 SSEGRWDDRAKVMKRMSE 171
>tr|A3AZY4|A3AZY4_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_016356 PE=4 SV=1 Length = 591
Score = 51.2 bits (121), Expect = 3e-05 Identities = 28/78 (35%), Positives = 40/78 (51%) Frame = +2
Query: 2 DKAVCTINEVPNSDKLILCSVLLGACQKGANLELGRWVFERALHLDDQFAAGYVYMSNIY 181 D A I + P +D +L L+GAC N E+G++ E+ L LD A YV +SNIY Sbjct: 478 DDAKSFIEDGPFTDNALLWQALMGACSFHGNSEVGKYAAEKLLLLDPSCTAAYVLLSNIY 537
Query: 182 ADADRQEEMGKFQAFGSE 235 + R ++ K SE Sbjct: 538 SSEGRWDDRAKVMKRMSE 555
>tr|A7QUQ9|A7QUQ9_VITVI Chromosome chr1 scaffold_180, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00006945001 PE=4 SV=1 Length = 828
Score = 50.4 bits (119), Expect = 4e-05 Identities = 27/69 (39%), Positives = 42/69 (60%) Frame = +2
Query: 2 DKAVCTINEVPNSDKLILCSVLLGACQKGANLELGRWVFERALHLDDQFAAGYVYMSNIY 181 DKAV I+E+P +++ LLGAC ++ELGR +R L ++ Q A +V +SN+Y Sbjct: 610 DKAVKLIDEIPFQPSVMVWRALLGACVIHNDIELGRISAQRVLEMEPQDKATHVLLSNMY 669
Query: 182 ADADRQEEM 208 A A R + + Sbjct: 670 ATAKRWDNV 678
>tr|Q75LD1|Q75LD1_ORYSJ Os03g0844000 protein OS=Oryza sativa subsp. japonica GN=OSJNBa0032G11.12 PE=2 SV=1 Length = 702
Score = 50.1 bits (118), Expect = 6e-05 Identities = 25/71 (35%), Positives = 41/71 (57%) Frame = +2
Query: 2 DKAVCTINEVPNSDKLILCSVLLGACQKGANLELGRWVFERALHLDDQFAAGYVYMSNIY 181 D+A+ IN++P ++ LL +C+ NL++G+ +R + L D+ +A YV MSNIY Sbjct: 566 DEALRMINDMPFEPDALIWKTLLASCKLHRNLDIGKLAADRLMELSDRDSASYVLMSNIY 625
Query: 182 ADADRQEEMGK 214 A E+ K Sbjct: 626 AMHGEWEDARK 636
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