BP916442 |
Clone id |
YMU001_000087_G02 |
Library |
YMU01 |
Length |
541 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000087_G02. |
Accession |
BP916442 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL474Contig1 |
Sequence |
GGTCGGCGGGGACAGGCAGGGATATAGCTCATGGGTTTGTAGTGGACGAACATATGTTAG CCAAAATTAGCCCACTCCAAGTTACATTACTTTGTGATGTTATGTCATGTTGATTTTGAA TCGGACCCAATGTTCGCATGGTATTCAAAGTGCTTGCATGCAGAACAGAATATATCCGCT CATCATGACTTCCCACAAGCACATCCTCAAGCTTTACGGTCTCGACCCTACAGATATTAG AATACCTACTTTCCATCACTTGCAAATTCTCTGTTACCCTCCTTCCTAACAAGTGTGGGC TCTTCTGTACAAGATAACTGAGTAGCGCACGGTCCGGGAAGGAAAGCTTGTTTTTCCTTT GCAGAGCAACTCTCACAACCTCAACTACCATTGAGCTTGCAATACCCTTAGCAGATCTCA TGGAGCCCAATATTACTCTACTGCTTATTACGCTCCTCTGCTTGTCTACTTGCTCTAAGC TATTCCATACTTCCCTTCCATAAACTGTCTCCATTAAACCCTGCTTCGCACTTGAAAGCT C |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q7NNG8 |
Definition |
sp|Q7NNG8|GLMU_GLOVI Bifunctional protein glmU OS=Gloeobacter violaceus |
Align length |
122 |
Score (bit) |
35.8 |
E-value |
0.14 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9SME5 |
Definition |
tr|A9SME5|A9SME5_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
101 |
Score (bit) |
89.0 |
E-value |
1.0e-16 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP916442|Adiantum capillus-veneris mRNA, clone: YMU001_000087_G02. (541 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9SME5|A9SME5_PHYPA Predicted protein OS=Physcomitrella paten... 89 1e-16 tr|A9RR70|A9RR70_PHYPA Predicted protein OS=Physcomitrella paten... 80 5e-14 tr|A9T884|A9T884_PHYPA Predicted protein OS=Physcomitrella paten... 66 1e-09 tr|A9T8M9|A9T8M9_PHYPA Predicted protein (Fragment) OS=Physcomit... 49 1e-04 tr|A7PWH0|A7PWH0_VITVI Chromosome chr8 scaffold_34, whole genome... 46 0.001 tr|A9QZ33|A9QZ33_YERPG Putative uncharacterized protein OS=Yersi... 36 1.5 tr|A5FB53|A5FB53_FLAJ1 Sensor protein OS=Flavobacterium johnsoni... 35 2.0 tr|Q98RB4|Q98RB4_MYCPU METHYLATED-DNA--PROTEIN-CYSTEINE METHYLTR... 35 2.6 tr|Q7CI90|Q7CI90_YERPE Putative uncharacterized protein OS=Yersi... 35 2.6 tr|Q66AZ3|Q66AZ3_YERPS Putative uncharacterized protein OS=Yersi... 35 2.6 tr|Q1CJM5|Q1CJM5_YERPN Putative uncharacterized protein OS=Yersi... 35 2.6 tr|Q1C878|Q1C878_YERPA Putative uncharacterized protein OS=Yersi... 35 2.6 tr|B2K2X1|B2K2X1_YERPB Putative uncharacterized protein OS=Yersi... 35 2.6 tr|B1JMA4|B1JMA4_YERPY Putative uncharacterized protein OS=Yersi... 35 2.6 tr|A7FII6|A7FII6_YERP3 Putative uncharacterized protein OS=Yersi... 35 2.6 tr|A4TJR4|A4TJR4_YERPP Putative uncharacterized protein OS=Yersi... 35 2.6 tr|B0HSD3|B0HSD3_YERPE Putative uncharacterized protein OS=Yersi... 35 2.6 tr|B0HCR2|B0HCR2_YERPE Putative uncharacterized protein OS=Yersi... 35 2.6 tr|B0H512|B0H512_YERPE Putative uncharacterized protein OS=Yersi... 35 2.6 tr|B0GRY7|B0GRY7_YERPE Putative uncharacterized protein OS=Yersi... 35 2.6 tr|B0GJM1|B0GJM1_YERPE Putative uncharacterized protein OS=Yersi... 35 2.6 tr|A9ZZZ8|A9ZZZ8_YERPE Putative uncharacterized protein OS=Yersi... 35 2.6 tr|A9ZBE9|A9ZBE9_YERPE Putative uncharacterized protein OS=Yersi... 35 2.6 tr|A6BR19|A6BR19_YERPE Putative uncharacterized protein OS=Yersi... 35 2.6 tr|A9TIZ3|A9TIZ3_PHYPA Predicted protein OS=Physcomitrella paten... 34 5.7 tr|Q176S2|Q176S2_AEDAE Putative uncharacterized protein OS=Aedes... 34 5.7 tr|Q9M2K7|Q9M2K7_ARATH Putative uncharacterized protein F28O9.25... 33 7.4 tr|Q9FYR8|Q9FYR8_ARATH Emb|CAB68146.1 (Putative uncharacterized ... 33 7.4 tr|Q8W4L8|Q8W4L8_ARATH Putative uncharacterized protein At3g5740... 33 7.4 tr|A2FNL9|A2FNL9_TRIVA Putative uncharacterized protein OS=Trich... 33 7.4
>tr|A9SME5|A9SME5_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_165707 PE=4 SV=1 Length = 598
Score = 89.0 bits (219), Expect = 1e-16 Identities = 45/101 (44%), Positives = 72/101 (71%) Frame = -1
Query: 535 SSAKQGLMETVYGREVWNSLEQVDKQRSVISSRVILGSMRSAKGIASSMVVEVVRVALQR 356 ++A G++E+VYG++ WNSLE+ D+ R VIS+ +I+G +R + +A +M E+VRVAL R Sbjct: 421 ANATTGVIESVYGKKFWNSLEEEDRARKVISTGLIVGGIRPVRSVAMAMATEIVRVALLR 480
Query: 355 KNKLSFPDRALLSYLVQKSPHLLGRRVTENLQVMESRYSNI 233 K + +F A+LS+LV KS +LG++V +LQV +S S + Sbjct: 481 KTRDAFNPEAVLSFLVHKS-SVLGKKVASHLQVHDSGMSPV 520
>tr|A9RR70|A9RR70_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_160579 PE=4 SV=1 Length = 681
Score = 80.5 bits (197), Expect = 5e-14 Identities = 36/97 (37%), Positives = 70/97 (72%) Frame = -1
Query: 523 QGLMETVYGREVWNSLEQVDKQRSVISSRVILGSMRSAKGIASSMVVEVVRVALQRKNKL 344 +GL+ ++YG +W SL++ ++R VISS ++G + + +A+ M E+VR+AL++KN+ Sbjct: 488 KGLIPSLYGSVLWRSLDKAHRERVVISSGFVMGKIEYVRKLANKMTTEIVRIALEKKNRR 547
Query: 343 SFPDRALLSYLVQKSPHLLGRRVTENLQVMESRYSNI 233 F D+A+++YLV +S +LG+RV ++L+++ +R S + Sbjct: 548 PFHDKAVINYLVHQS-SVLGKRVLDHLKIVPNRNSAV 583
>tr|A9T884|A9T884_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_168589 PE=4 SV=1 Length = 584
Score = 66.2 bits (160), Expect = 1e-09 Identities = 30/94 (31%), Positives = 65/94 (69%) Frame = -1
Query: 520 GLMETVYGREVWNSLEQVDKQRSVISSRVILGSMRSAKGIASSMVVEVVRVALQRKNKLS 341 GL+++VYG +W++L++ +KQ +V+S+ VI+G + +G+A M E+VR+A++ K++ Sbjct: 438 GLIQSVYGTLMWSNLDESNKQFAVVSAAVIMGEVHYVRGLAMKMTSEIVRMAIEHKSRRL 497
Query: 340 FPDRALLSYLVQKSPHLLGRRVTENLQVMESRYS 239 F D+A+L+ V ++ ++ E+++V+ ++ S Sbjct: 498 FHDKAVLNMWVHNKATIV-KKFAEHMKVVRNKDS 530
>tr|A9T8M9|A9T8M9_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_4931 PE=4 SV=1 Length = 268
Score = 49.3 bits (116), Expect = 1e-04 Identities = 25/52 (48%), Positives = 34/52 (65%) Frame = -1
Query: 463 KQRSVISSRVILGSMRSAKGIASSMVVEVVRVALQRKNKLSFPDRALLSYLV 308 K S I + VILG MR + + ++M E+VRVAL RKN++ F +LSYLV Sbjct: 217 KSWSFIDTGVILGGMRPVRSLTTAMATEIVRVALLRKNRMPFNVEIVLSYLV 268
>tr|A7PWH0|A7PWH0_VITVI Chromosome chr8 scaffold_34, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00025609001 PE=4 SV=1 Length = 511
Score = 46.2 bits (108), Expect = 0.001 Identities = 18/56 (32%), Positives = 37/56 (66%) Frame = -1
Query: 475 EQVDKQRSVISSRVILGSMRSAKGIASSMVVEVVRVALQRKNKLSFPDRALLSYLV 308 ++ + +++S +I+G R + ++++M++E+VR A+QRK K F + LL+ LV Sbjct: 383 DKTQNHQKLVNSEIIMGGTRGVRRLSNAMLIEIVRAAMQRKGKSPFSESVLLNQLV 438
>tr|A9QZ33|A9QZ33_YERPG Putative uncharacterized protein OS=Yersinia pestis bv. Antiqua (strain Angola) GN=YpAngola_A2486 PE=4 SV=1 Length = 310
Score = 35.8 bits (81), Expect = 1.5 Identities = 31/105 (29%), Positives = 51/105 (48%), Gaps = 3/105 (2%) Frame = -1
Query: 541 ELSSAKQGLMETVYGREVWNSLEQVDKQRSVISSRVILGSMRSAKG---IASSMVVEVVR 371 ++ S +G + +G+ +NS+E++ QRS+ S+ G+MRS K IA + + VR Sbjct: 206 DIESTDEG-SDLCWGKPHFNSIEKIASQRSIFSALSTHGNMRSKKAIEKIAHNHKADEVR 264
Query: 370 VALQRKNKLSFPDRALLSYLVQKSPHLLGRRVTENLQVMESRYSN 236 AL L D L L + H + RRV + + + SN Sbjct: 265 -ALSWVAMLRANDTVLSDVLTLEKSHYV-RRVLAEINMAQGETSN 307
>tr|A5FB53|A5FB53_FLAJ1 Sensor protein OS=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) GN=Fjoh_4574 PE=3 SV=1 Length = 729
Score = 35.4 bits (80), Expect = 2.0 Identities = 25/88 (28%), Positives = 45/88 (51%) Frame = -1
Query: 496 REVWNSLEQVDKQRSVISSRVILGSMRSAKGIASSMVVEVVRVALQRKNKLSFPDRALLS 317 +E W+ + + +RS+I+SRV L +AK +++ + +V N+LS D+AL Sbjct: 38 KEAWDDFKDSNFERSLITSRVALNYATAAKN--DNLIAKAYKVIAGNYNELSEIDKALFF 95
Query: 316 YLVQKSPHLLGRRVTENLQVMESRYSNI 233 Y + L T+N + S ++NI Sbjct: 96 Y----NKGLYYANKTDNDSLKYSLHNNI 119
>tr|Q98RB4|Q98RB4_MYCPU METHYLATED-DNA--PROTEIN-CYSTEINE METHYLTRANSFERASE (6-O-METHYLGUANINE-DNA METHYLTRANSFERASE) (O-6-METHYLGUANINE-DNA-ALKYLTRANSFERASE) OS=Mycoplasma pulmonis GN=MYPU_0950 PE=4 SV=1 Length = 378
Score = 35.0 bits (79), Expect = 2.6 Identities = 26/107 (24%), Positives = 51/107 (47%) Frame = -1
Query: 502 YGREVWNSLEQVDKQRSVISSRVILGSMRSAKGIASSMVVEVVRVALQRKNKLSFPDRAL 323 + ++V+N +D S+ + I S+ S KGI + ++QRKN LS+ D A+ Sbjct: 99 FAKKVYNKEFDIDALYSMSDNEAIK-SLSSLKGIGQWTAEMAMIFSMQRKNILSYKDLAI 157
Query: 322 LSYLVQKSPHLLGRRVTENLQVMESRYSNICRVETVKLEDVLVGSHD 182 + + + ++T + +E RYS + ++ L ++ G D Sbjct: 158 IRAIKMLYGYKDVDKIT--FEKLEKRYSPFASIASLYLWEIASGKWD 202
>tr|Q7CI90|Q7CI90_YERPE Putative uncharacterized protein OS=Yersinia pestis GN=YPO1995 PE=4 SV=1 Length = 310
Score = 35.0 bits (79), Expect = 2.6 Identities = 29/92 (31%), Positives = 45/92 (48%), Gaps = 3/92 (3%) Frame = -1
Query: 502 YGREVWNSLEQVDKQRSVISSRVILGSMRSAKG---IASSMVVEVVRVALQRKNKLSFPD 332 +G+ +NS+E++ QRS+ S+ G+MRS K IA + + VR AL L D Sbjct: 218 WGKPHFNSIEKIASQRSIFSALSTHGNMRSKKAIEKIAHNHKADEVR-ALSWVAMLRAND 276
Query: 331 RALLSYLVQKSPHLLGRRVTENLQVMESRYSN 236 L L + H + RRV + + + SN Sbjct: 277 TVLSDVLTLEKSHYV-RRVLAEINMAQGETSN 307
>tr|Q66AZ3|Q66AZ3_YERPS Putative uncharacterized protein OS=Yersinia pseudotuberculosis GN=YPTB1987 PE=4 SV=1 Length = 310
Score = 35.0 bits (79), Expect = 2.6 Identities = 29/92 (31%), Positives = 45/92 (48%), Gaps = 3/92 (3%) Frame = -1
Query: 502 YGREVWNSLEQVDKQRSVISSRVILGSMRSAKG---IASSMVVEVVRVALQRKNKLSFPD 332 +G+ +NS+E++ QRS+ S+ G+MRS K IA + + VR AL L D Sbjct: 218 WGKPHFNSIEKIASQRSIFSALSTHGNMRSKKAIEKIAHNHKADEVR-ALSWVAMLRAND 276
Query: 331 RALLSYLVQKSPHLLGRRVTENLQVMESRYSN 236 L L + H + RRV + + + SN Sbjct: 277 TVLSDVLTLEKSHYV-RRVLAEINMAQGETSN 307
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