BP916448
Clone id YMU001_000087_G08
Library
Length 527
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000087_G08.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
ATTCAAAAGACTGTTGAGATGTGTAATTTTGGAGGCCAGCTTCACCCCATGGCCCTCAAT
GTGCTTGCTGCTCAATTAGGAATGAACCCCTCCTCCTGGAAACTTTCTGCCTTAGATTTT
TCTGAAGCTTCAGATAGAGAACATAAGTTGTTCACAGAAATGGAGGCAATCGTTTTAGGA
CTGCCTGACCAACAGACCAGAGATATGTTCATGGACATTGCGCTTTTTACTCCAGAGACT
GTCCACAATGTCTACGAACTATGCCTTTGGCTACAGGACACATCGTATATTACGCTGGAG
CATGTAAGAAAGAAGTTGAATGTCTTGAGATTGAAGTCACTTTTGGAGGTTTGGAGCCTT
GATTGTGACAATATCTGCATACACGACCTTCATCGGGAGCTTGCAAAACGAAGGACCCAA
GTTGGCACTGATGCTTTGAGATTTATCTATCAGACTTCTGGTGAATTCAATCCATCAATA
TTGGAACAGATGGAGAGAGCTTGCTTTGTATGTAACAGTTGTACAAA
■■Homology search results ■■ -
sp_hit_id Q9SZA7
Definition sp|Q9SZA7|DRL29_ARATH Probable disease resistance protein At4g33300 OS=Arabidopsis thaliana
Align length 66
Score (bit) 35.8
E-value 0.13
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP916448|Adiantum capillus-veneris mRNA, clone:
YMU001_000087_G08.
(527 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q9SZA7|DRL29_ARATH Probable disease resistance protein At4g33... 36 0.13
sp|Q9VDW6|DMDA_DROME Dystrophin, isoforms A/C/F/G/H OS=Drosophil... 35 0.29
sp|P37253|ILVC_BACSU Ketol-acid reductoisomerase OS=Bacillus sub... 33 1.1
sp|O08638|MYH11_MOUSE Myosin-11 OS=Mus musculus GN=Myh11 PE=1 SV=1 30 5.4
sp|P35749|MYH11_HUMAN Myosin-11 OS=Homo sapiens GN=MYH11 PE=1 SV=3 30 5.4
sp|Q5UPF3|YL081_MIMIV Putative ankyrin repeat protein L81 OS=Aca... 30 9.2

>sp|Q9SZA7|DRL29_ARATH Probable disease resistance protein At4g33300
OS=Arabidopsis thaliana GN=At4g33300 PE=2 SV=2
Length = 832

Score = 35.8 bits (81), Expect = 0.13
Identities = 26/66 (39%), Positives = 34/66 (51%), Gaps = 5/66 (7%)
Frame = +1

Query: 46 PMALNVLAAQLGMNPSS-WK--LSALDFSEASDREH--KLFTEMEAIVLGLPDQQTRDMF 210
P+AL V A L P WK L L E +D H +L +MEA + L DQ T+D F
Sbjct: 378 PLALKVTGASLNGKPEMYWKGVLQRLSKGEPADDSHESRLLRQMEASLDNL-DQTTKDCF 436

Query: 211 MDIALF 228
+D+ F
Sbjct: 437 LDLGAF 442


>sp|Q9VDW6|DMDA_DROME Dystrophin, isoforms A/C/F/G/H OS=Drosophila
melanogaster GN=det PE=1 SV=3
Length = 3598

Score = 34.7 bits (78), Expect = 0.29
Identities = 32/138 (23%), Positives = 59/138 (42%)
Frame = +1

Query: 52 ALNVLAAQLGMNPSSWKLSALDFSEASDREHKLFTEMEAIVLGLPDQQTRDMFMDIALFT 231
A N L QL + +K S+ + +H + + L + + +D+A
Sbjct: 1350 AANRLQEQLNLMEVRFKYCQAKLSKCTAIQHSYESRLNRAYTDLRNVERSTEVVDVASAG 1409

Query: 232 PETVHNVYELCLWLQDTSYITLEHVRKKLNVLRLKSLLEVWSLDCDNICIHDLHRELAKR 411
P TV Y+ CL + Y TL ++ + ++S ++ C+ D + + K+
Sbjct: 1410 PNTVQTQYQKCLQI----YRTLSEIKSE-----IESTIKTGRRVCE-----DRYTKSPKQ 1455

Query: 412 RTQVGTDALRFIYQTSGE 465
+Q DAL+ +Y T GE
Sbjct: 1456 LSQ-RIDALKHLYNTLGE 1472


>sp|P37253|ILVC_BACSU Ketol-acid reductoisomerase OS=Bacillus
subtilis GN=ilvC PE=1 SV=1
Length = 342

Score = 32.7 bits (73), Expect = 1.1
Identities = 22/74 (29%), Positives = 39/74 (52%), Gaps = 6/74 (8%)
Frame = +1

Query: 7 KTVEMCNFGGQLHPMALNVLAAQLGMNPSSWKLSALDFSEASDREHKLFTEMEA------ 168
KTV + +G Q H ALN+ + G++ F++A + HK+F+ EA
Sbjct: 18 KTVAVIGYGSQGHAHALNL--KESGVDVIVGVRQGKSFTQAQEDGHKVFSVKEAAAQAEI 75

Query: 169 IVLGLPDQQTRDMF 210
I++ LPD+Q + ++
Sbjct: 76 IMVLLPDEQQQKVY 89


>sp|O08638|MYH11_MOUSE Myosin-11 OS=Mus musculus GN=Myh11 PE=1 SV=1
Length = 1972

Score = 30.4 bits (67), Expect = 5.4
Identities = 21/68 (30%), Positives = 34/68 (50%)
Frame = +1

Query: 121 SEASDREHKLFTEMEAIVLGLPDQQTRDMFMDIALFTPETVHNVYELCLWLQDTSYITLE 300
+E SD+ HKL E+E++ L + + + + + +V L LQDT + E
Sbjct: 1276 AELSDKVHKLQNEVESVTGMLNEAEGKAI---------KLAKDVASLGSQLQDTQELLQE 1326

Query: 301 HVRKKLNV 324
R+KLNV
Sbjct: 1327 ETRQKLNV 1334


>sp|P35749|MYH11_HUMAN Myosin-11 OS=Homo sapiens GN=MYH11 PE=1 SV=3
Length = 1972

Score = 30.4 bits (67), Expect = 5.4
Identities = 23/77 (29%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
Frame = +1

Query: 121 SEASDREHKLFTEMEAIVLGLPDQQTRDMFMDIALFTPETVHNVYELCLWLQDTSYITLE 300
+E +D+ HKL E+E++ L + + + + + +V L LQDT + E
Sbjct: 1276 AELNDKVHKLQNEVESVTGMLNEAEGKAI---------KLAKDVASLSSQLQDTQELLQE 1326

Query: 301 HVRKKLNV-LRLKSLLE 348
R+KLNV +L+ L E
Sbjct: 1327 ETRQKLNVSTKLRQLEE 1343


>sp|Q5UPF3|YL081_MIMIV Putative ankyrin repeat protein L81
OS=Acanthamoeba polyphaga mimivirus GN=MIMI_L81 PE=4
SV=1
Length = 277

Score = 29.6 bits (65), Expect = 9.2
Identities = 16/53 (30%), Positives = 27/53 (50%)
Frame = -3

Query: 525 CTTVTYKASSLHLFQY*WIEFTRSLIDKSQSISANLGPSFCKLPMKVVYADIV 367
C T K ++ F Y ++ T S I S + +L P+ +P+K YA+I+
Sbjct: 48 CVTKKLKIKTICSFIYYYLTITISTIKNSTMSAKHLRPNITHIPVKRSYANIL 100


tr_hit_id A9SQC0
Definition tr|A9SQC0|A9SQC0_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens
Align length 147
Score (bit) 57.0
E-value 6.0e-07
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP916448|Adiantum capillus-veneris mRNA, clone:
YMU001_000087_G08.
(527 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A9SQC0|A9SQC0_PHYPA Predicted protein OS=Physcomitrella paten... 57 6e-07
tr|A9T1I0|A9T1I0_PHYPA Predicted protein OS=Physcomitrella paten... 55 3e-06
tr|A9TDN3|A9TDN3_PHYPA Predicted protein OS=Physcomitrella paten... 50 7e-05
tr|A9TG61|A9TG61_PHYPA Predicted protein OS=Physcomitrella paten... 50 9e-05
tr|A9TC59|A9TC59_PHYPA Predicted protein OS=Physcomitrella paten... 43 0.009
tr|A9TIY4|A9TIY4_PHYPA Predicted protein OS=Physcomitrella paten... 38 0.36
tr|A7RLM8|A7RLM8_NEMVE Predicted protein OS=Nematostella vectens... 35 2.3
tr|A0C6Y6|A0C6Y6_PARTE Chromosome undetermined scaffold_153, who... 35 2.3
tr|B0TBG4|B0TBG4_HELMI Xanthine dehydrogenase molybdenum-binding... 34 4.0
tr|A7P7G1|A7P7G1_VITVI Chromosome chr9 scaffold_7, whole genome ... 34 4.0
tr|B4PFQ0|B4PFQ0_DROYA GE21851 OS=Drosophila yakuba GN=GE21851 P... 34 4.0
tr|B6YPX6|B6YPX6_9STRE Equibactin equibactin nonribosomal peptid... 33 6.7
tr|Q7NC61|Q7NC61_MYCGA Putative uncharacterized protein OS=Mycop... 33 8.8
tr|Q9GRP7|Q9GRP7_LEIMA Putative uncharacterized protein L3377.1L... 33 8.8
tr|Q4FWY6|Q4FWY6_LEIMA Putative uncharacterized protein OS=Leish... 33 8.8
tr|A7TRZ9|A7TRZ9_VANPO Putative uncharacterized protein OS=Vande... 33 8.8

>tr|A9SQC0|A9SQC0_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_166149 PE=4 SV=1
Length = 1269

Score = 57.0 bits (136), Expect = 6e-07
Identities = 48/147 (32%), Positives = 69/147 (46%), Gaps = 13/147 (8%)
Frame = +1

Query: 22 CNFGGQLHPMALNVLAAQLGMN---PSSW--KLSALD-FSEASDREHKLFTEMEAIVLGL 183
C HP+AL VL QLG P W L+ +D F+ + +H +F+ + L
Sbjct: 455 CGISYHYHPLALQVLGEQLGRVGYVPERWWALLNEIDLFNPFREPKHPVFSILRKSFDAL 514

Query: 184 PDQQTRDMFMDIALFTPETVHNV-------YELCLWLQDTSYITLEHVRKKLNVLRLKSL 342
Q +FMD ALF P +V + + WL I+++ V+K+L L+ KSL
Sbjct: 515 TAQDQL-LFMDAALFVPYSVGGYDFDWGYKWSVFEWLGMVHGISVDTVKKRLENLKSKSL 573

Query: 343 LEVWSLDCDNICIHDLHRELAKRRTQV 423
LE I +HDL E AK T+V
Sbjct: 574 LENLGDGFSRIGMHDLWHEFAKLETKV 600


>tr|A9T1I0|A9T1I0_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_167552 PE=4 SV=1
Length = 1042

Score = 54.7 bits (130), Expect = 3e-06
Identities = 48/168 (28%), Positives = 78/168 (46%), Gaps = 16/168 (9%)
Frame = +1

Query: 1 IQKTVEMCNFGG------QLHPMALNVLAAQL-GMNPSSWKLSALD-----FSEASDREH 144
+QK VE C + HP++L VL QL ++PS W+ + F+ + + H
Sbjct: 427 VQKCVEECLYSKGDDADHHYHPLSLLVLGGQLRSVDPSKWQEILAEEPDIKFNLSGEMPH 486

Query: 145 KLFTEMEAIVLGLPDQQTRDMFMDIALFTPE---TVHNVYELCLWLQDTSYITLEHVRKK 315
+F+ E L + +FMD+ALFTPE T+ + WL ++ V +
Sbjct: 487 PVFSIFERSYYSLRRAEQL-LFMDVALFTPERYLTLGIPGSIFTWLSMLHNLSETQVITR 545

Query: 316 LNVLRLKSLLEVWSLDCDNICIHDLHRELAKRRTQ-VGTDALRFIYQT 456
L +L + +LE +I +HDL RE AK + + + D +Y T
Sbjct: 546 LKLLNTRGMLEDLGDGSCSIRMHDLFREFAKWKAKAMNLDTQECLYVT 593


>tr|A9TDN3|A9TDN3_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_169462 PE=4 SV=1
Length = 1173

Score = 50.1 bits (118), Expect = 7e-05
Identities = 55/214 (25%), Positives = 84/214 (39%), Gaps = 62/214 (28%)
Frame = +1

Query: 1 IQKTVEMC------NFGGQLHPMALNVLAAQL-GMNPSSWKLSALD-----FSEASDREH 144
IQ+ VE C NFG HP+AL VL QL +PS W+ LD F+ + H
Sbjct: 529 IQRCVEECLYSKGENFGSHYHPLALKVLGEQLRSSDPSEWQ-DVLDEEPDKFNLLGETTH 587

Query: 145 KLFTEMEAIVLGLPDQQTRDMFMDIALFTPET---VHNVYELCLWLQDTSYITLEHVRK- 312
++F+ ++ L + + FMD+AL+TPE + + WL + + VR+
Sbjct: 588 RVFSVLKRSYNSLREDD-QLFFMDVALYTPEKYIFLEVPGNIFYWLSMVHNLEVTQVRRR 646

Query: 313 ---------------------------------------------KLNVLRLKSLLEVWS 357
KL L+ + +LE
Sbjct: 647 SISIGVPMEITDPRLLMITMRYGQLGMPIECNIYFMLTSAGCSWHKLERLKTRGMLEDLG 706

Query: 358 LDCDNICIHDLHRELAKRRTQ-VGTDALRFIYQT 456
+I +H+L RELAK + V D R +Y+T
Sbjct: 707 DGFRSIAMHELFRELAKMEVKAVDFDTRRCVYET 740


>tr|A9TG61|A9TG61_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_92347 PE=4 SV=1
Length = 905

Score = 49.7 bits (117), Expect = 9e-05
Identities = 41/161 (25%), Positives = 75/161 (46%), Gaps = 8/161 (4%)
Frame = +1

Query: 7 KTVEMCNFG-----GQLHPMALNVLAAQLGMNPSSWKLSALDFSE-ASDREHKLFTEMEA 168
K VE C F + HP+AL VL ++G W+ DF + + H +F+ + +
Sbjct: 261 KVVEQCCFKVDISTSEYHPLALKVLGVRVGPVAQEWQ--KFDFKQYTKENIHPIFSILRS 318

Query: 169 IVLGLPDQQTRDMFMDIALFTPETVHNVYELCLWLQDTSYITLEHVRKKLNVLRLKSLLE 348
L R MF+D+A++ + + Y +W + + K L L +KSL+E
Sbjct: 319 GYDALRPLYQR-MFIDLAVYQADWTSHAYFYNVWRYVHGERDEDALVKLLKELLVKSLIE 377

Query: 349 VWSLDCDNICIHDLHRELAKR--RTQVGTDALRFIYQTSGE 465
L+ + IHDL R+ + ++V + +++QT+ +
Sbjct: 378 HCDLNSGKVYIHDLCRDFIQMEVESEVKHNPRCYLFQTNNQ 418


>tr|A9TC59|A9TC59_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_169270 PE=4 SV=1
Length = 1083

Score = 43.1 bits (100), Expect = 0.009
Identities = 44/165 (26%), Positives = 71/165 (43%), Gaps = 13/165 (7%)
Frame = +1

Query: 1 IQKTVEMCNFGG------QLHPMALNVLAAQL-GMNPSSWKLSALD-----FSEASDREH 144
+QK VE C + HP++L VL QL ++PS W+ + F+ + + H
Sbjct: 447 VQKCVEECLYSKGDDADHHYHPLSLLVLGGQLRSVDPSKWQEILAEEPDIKFNLSGEMPH 506

Query: 145 KLFTEMEAIVLGLPDQQTRDMFMDIALFTPETVHNVYELCLWLQDTSYITLEHVRKKLNV 324
+F+ E L + + +FMD+A FTPE Y+ L +
Sbjct: 507 PVFSIFERSYYSL-GRAEQLLFMDVAFFTPE---------------RYL-------HLKL 543

Query: 325 LRLKSLLEVWSLDCDNICIHDLHRELAKRRTQ-VGTDALRFIYQT 456
L + +LE +I +HDL RE AK + + + D +Y T
Sbjct: 544 LNTRGMLEDLGDGSCSIRMHDLFREFAKWKAKAMNLDTQECLYVT 588


>tr|A9TIY4|A9TIY4_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_146230 PE=4 SV=1
Length = 270

Score = 37.7 bits (86), Expect = 0.36
Identities = 38/147 (25%), Positives = 70/147 (47%), Gaps = 5/147 (3%)
Frame = +1

Query: 43 HPMALNVLAAQLGMNPSS--WKLSALDFSEASD--REHKLFTEMEAIVLGLPDQQTRDMF 210
HP+ L +L + L S W+L+ AS + L+ +E L ++ + MF
Sbjct: 121 HPLTLQILGSSLHNQTSLCVWELNIQRLKRASKFLGSNDLWARLEPTYKDLNGEE-KTMF 179

Query: 211 MDIALFTPETV-HNVYELCLWLQDTSYITLEHVRKKLNVLRLKSLLEVWSLDCDNICIHD 387
+DIA F + + H +Q Y ++ ++ + L+ KS +++ S I IHD
Sbjct: 180 LDIACFHCKDIWHENINQDTIIQFYEY-EFKNAKEIITSLKDKSFIKLDSFGF--ISIHD 236

Query: 388 LHRELAKRRTQVGTDALRFIYQTSGEF 468
L R++A+R ++ D +R ++ G F
Sbjct: 237 LLRDMARRISREKFDGIRRWNESDGSF 263


>tr|A7RLM8|A7RLM8_NEMVE Predicted protein OS=Nematostella vectensis
GN=v1g160179 PE=4 SV=1
Length = 1217

Score = 35.0 bits (79), Expect = 2.3
Identities = 35/121 (28%), Positives = 59/121 (48%), Gaps = 9/121 (7%)
Frame = +1

Query: 7 KTVEMCNFGGQLHPMALNVLAAQLGMNPSSWK--LSALDFSEASDREHKLFTE----MEA 168
K V +CN P+A++++ A L +P+ WK L+ + S + K E EA
Sbjct: 298 KLVNLCNGS----PLAISMIGAMLKEHPNRWKYYLNQFQKKKVSKLKTKFAYEYPSLSEA 353

Query: 169 IVLGLPD--QQTRDMFMDIALFTPETVHNVYELC-LWLQDTSYITLEHVRKKLNVLRLKS 339
I++G+ + ++ R ++D ALF + LC LW ++ LE V ++ L KS
Sbjct: 354 ILMGINNLSEEMRTYYIDFALFDDGSKVPAQVLCILWDEE-----LEIVEDLMDELVNKS 408

Query: 340 L 342
L
Sbjct: 409 L 409


>tr|A0C6Y6|A0C6Y6_PARTE Chromosome undetermined scaffold_153, whole
genome shotgun sequence OS=Paramecium tetraurelia
GN=GSPATT00035682001 PE=4 SV=1
Length = 821

Score = 35.0 bits (79), Expect = 2.3
Identities = 33/127 (25%), Positives = 57/127 (44%), Gaps = 1/127 (0%)
Frame = +1

Query: 25 NFGGQLHPMALNVLAAQLGMNPSSWKLSALDFSEASDREH-KLFTEMEAIVLGLPDQQTR 201
N G L P LN+ QLG+NP+ +L + + D+ H + ++ME V+ +
Sbjct: 250 NQNGWLDPKELNIALLQLGINPTPQELD--QYFQVFDKNHDEKISKMEFNVI------IK 301

Query: 202 DMFMDIALFTPETVHNVYELCLWLQDTSYITLEHVRKKLNVLRLKSLLEVWSLDCDNICI 381
D M L T EL +Q I + R +L++ +L+ + + + DN +
Sbjct: 302 DQLMKAILSTD-------ELFAQIQSEYNILTDANRNELDMAQLQQVFKKLGILLDNNDL 354

Query: 382 HDLHREL 402
DL E+
Sbjct: 355 IDLFEEI 361


>tr|B0TBG4|B0TBG4_HELMI Xanthine dehydrogenase molybdenum-binding
subunit OS=Heliobacterium modesticaldum (strain ATCC
51547 / Ice1) GN=xdhA PE=4 SV=1
Length = 764

Score = 34.3 bits (77), Expect = 4.0
Identities = 26/106 (24%), Positives = 43/106 (40%)
Frame = +1

Query: 43 HPMALNVLAAQLGMNPSSWKLSALDFSEASDREHKLFTEMEAIVLGLPDQQTRDMFMDIA 222
HP+ L V A++ MN + +E +FT+M A +G+P
Sbjct: 455 HPVGLEVAGARIVMNEDGSVQLQVGATEIGQGSDTVFTQMVAETVGIPPSMVH------I 508

Query: 223 LFTPETVHNVYELCLWLQDTSYITLEHVRKKLNVLRLKSLLEVWSL 360
L +T + +L + +YIT VRK ++ K L W +
Sbjct: 509 LSEQDTDISPVDLGSYASRQTYITGMAVRKAAEAIKAKVLDYAWGM 554


>tr|A7P7G1|A7P7G1_VITVI Chromosome chr9 scaffold_7, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00034448001
PE=4 SV=1
Length = 971

Score = 34.3 bits (77), Expect = 4.0
Identities = 32/134 (23%), Positives = 60/134 (44%), Gaps = 14/134 (10%)
Frame = +1

Query: 46 PMALNVLAAQLGM--NPSSWKLSALDF----SEASDREHKLFTEMEAIVLGLPDQQTRDM 207
P+AL L + +PS+W D +E + E KLF ++ LPD ++
Sbjct: 447 PLALVTLGRAMAAEKDPSNWDKVIQDLRKSPAEITGMEDKLFHRLKLSYDRLPDNASKSC 506

Query: 208 FMDIALFTPE-TVHNVYELCLWLQD-------TSYITLEHVRKKLNVLRLKSLLEVWSLD 363
F+ ++F + ++N + LW+ + + + +K +N L+ LLE
Sbjct: 507 FIYHSIFREDWEIYNYQLIELWIGEGFLGEVHDIHEARDQGKKIINTLKHACLLESCGSK 566

Query: 364 CDNICIHDLHRELA 405
+ IHD+ R++A
Sbjct: 567 EYRVKIHDVIRDMA 580