BP916448 |
Clone id |
YMU001_000087_G08 |
Library |
YMU01 |
Length |
527 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000087_G08. |
Accession |
BP916448 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL3651Contig1 |
Sequence |
ATTCAAAAGACTGTTGAGATGTGTAATTTTGGAGGCCAGCTTCACCCCATGGCCCTCAAT GTGCTTGCTGCTCAATTAGGAATGAACCCCTCCTCCTGGAAACTTTCTGCCTTAGATTTT TCTGAAGCTTCAGATAGAGAACATAAGTTGTTCACAGAAATGGAGGCAATCGTTTTAGGA CTGCCTGACCAACAGACCAGAGATATGTTCATGGACATTGCGCTTTTTACTCCAGAGACT GTCCACAATGTCTACGAACTATGCCTTTGGCTACAGGACACATCGTATATTACGCTGGAG CATGTAAGAAAGAAGTTGAATGTCTTGAGATTGAAGTCACTTTTGGAGGTTTGGAGCCTT GATTGTGACAATATCTGCATACACGACCTTCATCGGGAGCTTGCAAAACGAAGGACCCAA GTTGGCACTGATGCTTTGAGATTTATCTATCAGACTTCTGGTGAATTCAATCCATCAATA TTGGAACAGATGGAGAGAGCTTGCTTTGTATGTAACAGTTGTACAAA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9SZA7 |
Definition |
sp|Q9SZA7|DRL29_ARATH Probable disease resistance protein At4g33300 OS=Arabidopsis thaliana |
Align length |
66 |
Score (bit) |
35.8 |
E-value |
0.13 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9SQC0 |
Definition |
tr|A9SQC0|A9SQC0_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
147 |
Score (bit) |
57.0 |
E-value |
6.0e-07 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP916448|Adiantum capillus-veneris mRNA, clone: YMU001_000087_G08. (527 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9SQC0|A9SQC0_PHYPA Predicted protein OS=Physcomitrella paten... 57 6e-07 tr|A9T1I0|A9T1I0_PHYPA Predicted protein OS=Physcomitrella paten... 55 3e-06 tr|A9TDN3|A9TDN3_PHYPA Predicted protein OS=Physcomitrella paten... 50 7e-05 tr|A9TG61|A9TG61_PHYPA Predicted protein OS=Physcomitrella paten... 50 9e-05 tr|A9TC59|A9TC59_PHYPA Predicted protein OS=Physcomitrella paten... 43 0.009 tr|A9TIY4|A9TIY4_PHYPA Predicted protein OS=Physcomitrella paten... 38 0.36 tr|A7RLM8|A7RLM8_NEMVE Predicted protein OS=Nematostella vectens... 35 2.3 tr|A0C6Y6|A0C6Y6_PARTE Chromosome undetermined scaffold_153, who... 35 2.3 tr|B0TBG4|B0TBG4_HELMI Xanthine dehydrogenase molybdenum-binding... 34 4.0 tr|A7P7G1|A7P7G1_VITVI Chromosome chr9 scaffold_7, whole genome ... 34 4.0 tr|B4PFQ0|B4PFQ0_DROYA GE21851 OS=Drosophila yakuba GN=GE21851 P... 34 4.0 tr|B6YPX6|B6YPX6_9STRE Equibactin equibactin nonribosomal peptid... 33 6.7 tr|Q7NC61|Q7NC61_MYCGA Putative uncharacterized protein OS=Mycop... 33 8.8 tr|Q9GRP7|Q9GRP7_LEIMA Putative uncharacterized protein L3377.1L... 33 8.8 tr|Q4FWY6|Q4FWY6_LEIMA Putative uncharacterized protein OS=Leish... 33 8.8 tr|A7TRZ9|A7TRZ9_VANPO Putative uncharacterized protein OS=Vande... 33 8.8
>tr|A9SQC0|A9SQC0_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_166149 PE=4 SV=1 Length = 1269
Score = 57.0 bits (136), Expect = 6e-07 Identities = 48/147 (32%), Positives = 69/147 (46%), Gaps = 13/147 (8%) Frame = +1
Query: 22 CNFGGQLHPMALNVLAAQLGMN---PSSW--KLSALD-FSEASDREHKLFTEMEAIVLGL 183 C HP+AL VL QLG P W L+ +D F+ + +H +F+ + L Sbjct: 455 CGISYHYHPLALQVLGEQLGRVGYVPERWWALLNEIDLFNPFREPKHPVFSILRKSFDAL 514
Query: 184 PDQQTRDMFMDIALFTPETVHNV-------YELCLWLQDTSYITLEHVRKKLNVLRLKSL 342 Q +FMD ALF P +V + + WL I+++ V+K+L L+ KSL Sbjct: 515 TAQDQL-LFMDAALFVPYSVGGYDFDWGYKWSVFEWLGMVHGISVDTVKKRLENLKSKSL 573
Query: 343 LEVWSLDCDNICIHDLHRELAKRRTQV 423 LE I +HDL E AK T+V Sbjct: 574 LENLGDGFSRIGMHDLWHEFAKLETKV 600
>tr|A9T1I0|A9T1I0_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_167552 PE=4 SV=1 Length = 1042
Score = 54.7 bits (130), Expect = 3e-06 Identities = 48/168 (28%), Positives = 78/168 (46%), Gaps = 16/168 (9%) Frame = +1
Query: 1 IQKTVEMCNFGG------QLHPMALNVLAAQL-GMNPSSWKLSALD-----FSEASDREH 144 +QK VE C + HP++L VL QL ++PS W+ + F+ + + H Sbjct: 427 VQKCVEECLYSKGDDADHHYHPLSLLVLGGQLRSVDPSKWQEILAEEPDIKFNLSGEMPH 486
Query: 145 KLFTEMEAIVLGLPDQQTRDMFMDIALFTPE---TVHNVYELCLWLQDTSYITLEHVRKK 315 +F+ E L + +FMD+ALFTPE T+ + WL ++ V + Sbjct: 487 PVFSIFERSYYSLRRAEQL-LFMDVALFTPERYLTLGIPGSIFTWLSMLHNLSETQVITR 545
Query: 316 LNVLRLKSLLEVWSLDCDNICIHDLHRELAKRRTQ-VGTDALRFIYQT 456 L +L + +LE +I +HDL RE AK + + + D +Y T Sbjct: 546 LKLLNTRGMLEDLGDGSCSIRMHDLFREFAKWKAKAMNLDTQECLYVT 593
>tr|A9TDN3|A9TDN3_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_169462 PE=4 SV=1 Length = 1173
Score = 50.1 bits (118), Expect = 7e-05 Identities = 55/214 (25%), Positives = 84/214 (39%), Gaps = 62/214 (28%) Frame = +1
Query: 1 IQKTVEMC------NFGGQLHPMALNVLAAQL-GMNPSSWKLSALD-----FSEASDREH 144 IQ+ VE C NFG HP+AL VL QL +PS W+ LD F+ + H Sbjct: 529 IQRCVEECLYSKGENFGSHYHPLALKVLGEQLRSSDPSEWQ-DVLDEEPDKFNLLGETTH 587
Query: 145 KLFTEMEAIVLGLPDQQTRDMFMDIALFTPET---VHNVYELCLWLQDTSYITLEHVRK- 312 ++F+ ++ L + + FMD+AL+TPE + + WL + + VR+ Sbjct: 588 RVFSVLKRSYNSLREDD-QLFFMDVALYTPEKYIFLEVPGNIFYWLSMVHNLEVTQVRRR 646
Query: 313 ---------------------------------------------KLNVLRLKSLLEVWS 357 KL L+ + +LE Sbjct: 647 SISIGVPMEITDPRLLMITMRYGQLGMPIECNIYFMLTSAGCSWHKLERLKTRGMLEDLG 706
Query: 358 LDCDNICIHDLHRELAKRRTQ-VGTDALRFIYQT 456 +I +H+L RELAK + V D R +Y+T Sbjct: 707 DGFRSIAMHELFRELAKMEVKAVDFDTRRCVYET 740
>tr|A9TG61|A9TG61_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_92347 PE=4 SV=1 Length = 905
Score = 49.7 bits (117), Expect = 9e-05 Identities = 41/161 (25%), Positives = 75/161 (46%), Gaps = 8/161 (4%) Frame = +1
Query: 7 KTVEMCNFG-----GQLHPMALNVLAAQLGMNPSSWKLSALDFSE-ASDREHKLFTEMEA 168 K VE C F + HP+AL VL ++G W+ DF + + H +F+ + + Sbjct: 261 KVVEQCCFKVDISTSEYHPLALKVLGVRVGPVAQEWQ--KFDFKQYTKENIHPIFSILRS 318
Query: 169 IVLGLPDQQTRDMFMDIALFTPETVHNVYELCLWLQDTSYITLEHVRKKLNVLRLKSLLE 348 L R MF+D+A++ + + Y +W + + K L L +KSL+E Sbjct: 319 GYDALRPLYQR-MFIDLAVYQADWTSHAYFYNVWRYVHGERDEDALVKLLKELLVKSLIE 377
Query: 349 VWSLDCDNICIHDLHRELAKR--RTQVGTDALRFIYQTSGE 465 L+ + IHDL R+ + ++V + +++QT+ + Sbjct: 378 HCDLNSGKVYIHDLCRDFIQMEVESEVKHNPRCYLFQTNNQ 418
>tr|A9TC59|A9TC59_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_169270 PE=4 SV=1 Length = 1083
Score = 43.1 bits (100), Expect = 0.009 Identities = 44/165 (26%), Positives = 71/165 (43%), Gaps = 13/165 (7%) Frame = +1
Query: 1 IQKTVEMCNFGG------QLHPMALNVLAAQL-GMNPSSWKLSALD-----FSEASDREH 144 +QK VE C + HP++L VL QL ++PS W+ + F+ + + H Sbjct: 447 VQKCVEECLYSKGDDADHHYHPLSLLVLGGQLRSVDPSKWQEILAEEPDIKFNLSGEMPH 506
Query: 145 KLFTEMEAIVLGLPDQQTRDMFMDIALFTPETVHNVYELCLWLQDTSYITLEHVRKKLNV 324 +F+ E L + + +FMD+A FTPE Y+ L + Sbjct: 507 PVFSIFERSYYSL-GRAEQLLFMDVAFFTPE---------------RYL-------HLKL 543
Query: 325 LRLKSLLEVWSLDCDNICIHDLHRELAKRRTQ-VGTDALRFIYQT 456 L + +LE +I +HDL RE AK + + + D +Y T Sbjct: 544 LNTRGMLEDLGDGSCSIRMHDLFREFAKWKAKAMNLDTQECLYVT 588
>tr|A9TIY4|A9TIY4_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_146230 PE=4 SV=1 Length = 270
Score = 37.7 bits (86), Expect = 0.36 Identities = 38/147 (25%), Positives = 70/147 (47%), Gaps = 5/147 (3%) Frame = +1
Query: 43 HPMALNVLAAQLGMNPSS--WKLSALDFSEASD--REHKLFTEMEAIVLGLPDQQTRDMF 210 HP+ L +L + L S W+L+ AS + L+ +E L ++ + MF Sbjct: 121 HPLTLQILGSSLHNQTSLCVWELNIQRLKRASKFLGSNDLWARLEPTYKDLNGEE-KTMF 179
Query: 211 MDIALFTPETV-HNVYELCLWLQDTSYITLEHVRKKLNVLRLKSLLEVWSLDCDNICIHD 387 +DIA F + + H +Q Y ++ ++ + L+ KS +++ S I IHD Sbjct: 180 LDIACFHCKDIWHENINQDTIIQFYEY-EFKNAKEIITSLKDKSFIKLDSFGF--ISIHD 236
Query: 388 LHRELAKRRTQVGTDALRFIYQTSGEF 468 L R++A+R ++ D +R ++ G F Sbjct: 237 LLRDMARRISREKFDGIRRWNESDGSF 263
>tr|A7RLM8|A7RLM8_NEMVE Predicted protein OS=Nematostella vectensis GN=v1g160179 PE=4 SV=1 Length = 1217
Score = 35.0 bits (79), Expect = 2.3 Identities = 35/121 (28%), Positives = 59/121 (48%), Gaps = 9/121 (7%) Frame = +1
Query: 7 KTVEMCNFGGQLHPMALNVLAAQLGMNPSSWK--LSALDFSEASDREHKLFTE----MEA 168 K V +CN P+A++++ A L +P+ WK L+ + S + K E EA Sbjct: 298 KLVNLCNGS----PLAISMIGAMLKEHPNRWKYYLNQFQKKKVSKLKTKFAYEYPSLSEA 353
Query: 169 IVLGLPD--QQTRDMFMDIALFTPETVHNVYELC-LWLQDTSYITLEHVRKKLNVLRLKS 339 I++G+ + ++ R ++D ALF + LC LW ++ LE V ++ L KS Sbjct: 354 ILMGINNLSEEMRTYYIDFALFDDGSKVPAQVLCILWDEE-----LEIVEDLMDELVNKS 408
Query: 340 L 342 L Sbjct: 409 L 409
>tr|A0C6Y6|A0C6Y6_PARTE Chromosome undetermined scaffold_153, whole genome shotgun sequence OS=Paramecium tetraurelia GN=GSPATT00035682001 PE=4 SV=1 Length = 821
Score = 35.0 bits (79), Expect = 2.3 Identities = 33/127 (25%), Positives = 57/127 (44%), Gaps = 1/127 (0%) Frame = +1
Query: 25 NFGGQLHPMALNVLAAQLGMNPSSWKLSALDFSEASDREH-KLFTEMEAIVLGLPDQQTR 201 N G L P LN+ QLG+NP+ +L + + D+ H + ++ME V+ + Sbjct: 250 NQNGWLDPKELNIALLQLGINPTPQELD--QYFQVFDKNHDEKISKMEFNVI------IK 301
Query: 202 DMFMDIALFTPETVHNVYELCLWLQDTSYITLEHVRKKLNVLRLKSLLEVWSLDCDNICI 381 D M L T EL +Q I + R +L++ +L+ + + + DN + Sbjct: 302 DQLMKAILSTD-------ELFAQIQSEYNILTDANRNELDMAQLQQVFKKLGILLDNNDL 354
Query: 382 HDLHREL 402 DL E+ Sbjct: 355 IDLFEEI 361
>tr|B0TBG4|B0TBG4_HELMI Xanthine dehydrogenase molybdenum-binding subunit OS=Heliobacterium modesticaldum (strain ATCC 51547 / Ice1) GN=xdhA PE=4 SV=1 Length = 764
Score = 34.3 bits (77), Expect = 4.0 Identities = 26/106 (24%), Positives = 43/106 (40%) Frame = +1
Query: 43 HPMALNVLAAQLGMNPSSWKLSALDFSEASDREHKLFTEMEAIVLGLPDQQTRDMFMDIA 222 HP+ L V A++ MN + +E +FT+M A +G+P Sbjct: 455 HPVGLEVAGARIVMNEDGSVQLQVGATEIGQGSDTVFTQMVAETVGIPPSMVH------I 508
Query: 223 LFTPETVHNVYELCLWLQDTSYITLEHVRKKLNVLRLKSLLEVWSL 360 L +T + +L + +YIT VRK ++ K L W + Sbjct: 509 LSEQDTDISPVDLGSYASRQTYITGMAVRKAAEAIKAKVLDYAWGM 554
>tr|A7P7G1|A7P7G1_VITVI Chromosome chr9 scaffold_7, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00034448001 PE=4 SV=1 Length = 971
Score = 34.3 bits (77), Expect = 4.0 Identities = 32/134 (23%), Positives = 60/134 (44%), Gaps = 14/134 (10%) Frame = +1
Query: 46 PMALNVLAAQLGM--NPSSWKLSALDF----SEASDREHKLFTEMEAIVLGLPDQQTRDM 207 P+AL L + +PS+W D +E + E KLF ++ LPD ++ Sbjct: 447 PLALVTLGRAMAAEKDPSNWDKVIQDLRKSPAEITGMEDKLFHRLKLSYDRLPDNASKSC 506
Query: 208 FMDIALFTPE-TVHNVYELCLWLQD-------TSYITLEHVRKKLNVLRLKSLLEVWSLD 363 F+ ++F + ++N + LW+ + + + +K +N L+ LLE Sbjct: 507 FIYHSIFREDWEIYNYQLIELWIGEGFLGEVHDIHEARDQGKKIINTLKHACLLESCGSK 566
Query: 364 CDNICIHDLHRELA 405 + IHD+ R++A Sbjct: 567 EYRVKIHDVIRDMA 580
|