BP916455
Clone id YMU001_000087_H04
Library
Length 539
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000087_H04.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
CGGCCTTGCTTTGGTTTTCATGGCCAACTTCAAAGGTTGTCGGCTAGTCTTCAGCCATAT
TTCACCTTATTCAAGAATCATTTGGTTCTTCATATTTTTAATTTAGGTTGGATCTCGTGC
AAACTTCATCAACCTCTTCGTACAAGTGCTTTACTTGCAATTGGCCGTGTAGATCTGTGG
TTTGCCAATCCTCCTCAAGAGAGTCGTCCAGAAGATACTTAGACTCGTCCTTAGTAGAGG
GGTTGGTGGAGTCATGATTCCCATCAGAATCTTCTCTTGCAAAATTGTGTCGCGAACCTA
CTCCGGTTTCTCCTTCGAGCCTCTGTCAGAGTCCATAGTGTGTGCTCAAAAAAAATCGGA
CTGCCTCCTCTTGAGAAGAGAATATACTAAAGCTCTGATACCAATGTAACCGGCTTGACA
CAGACAAAACAATAAATCCTCAGCAACACACACAAATAGAACAAAACTTTGAACAACTGA
AAAGTAGTCAAGACATGAAGCAGCAAAGTTGTACAACCAGATGCACTGGCCCCCAAGTC
■■Homology search results ■■ -
sp_hit_id Q58322
Definition sp|Q58322|Y912_METJA Uncharacterized protein MJ0912 OS=Methanocaldococcus jannaschii
Align length 31
Score (bit) 30.4
E-value 5.7
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP916455|Adiantum capillus-veneris mRNA, clone:
YMU001_000087_H04.
(539 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q58322|Y912_METJA Uncharacterized protein MJ0912 OS=Methanoca... 30 5.7
sp|Q70PW6|PGSB2_DROSI Peptidoglycan-recognition protein-SB2 OS=D... 30 5.7
sp|Q9PU85|PIM3_COTJA Serine/threonine-protein kinase Pim-3 OS=Co... 30 9.8
sp|Q9VV96|PGSB2_DROME Peptidoglycan-recognition protein-SB2 OS=D... 30 9.8

>sp|Q58322|Y912_METJA Uncharacterized protein MJ0912
OS=Methanocaldococcus jannaschii GN=MJ0912 PE=4 SV=1
Length = 243

Score = 30.4 bits (67), Expect = 5.7
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = +2

Query: 5 LALVFMANFKGCRLVFSHISPYSRIIWFFIF 97
L L+ N KG +++FSH +P IW ++F
Sbjct: 105 LPLIIEENIKGKKVIFSHANPKHPEIWEYLF 135


>sp|Q70PW6|PGSB2_DROSI Peptidoglycan-recognition protein-SB2
OS=Drosophila simulans GN=PGRP-SB2 PE=3 SV=1
Length = 182

Score = 30.4 bits (67), Expect = 5.7
Identities = 20/71 (28%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Frame = +2

Query: 155 LQLAV*ICGLPILLKRVVQKI--LRLVLSRGVGGVMIPIRIFSCKIVSRTYSGFSFEPLS 328
LQLA+ +CGL + L ++V + + +S + +M+P+R+ I+ T + F P
Sbjct: 3 LQLALVLCGLTLALGQIVPRSSWCPVPISPRIPRLMVPVRLI---IIHHTVTAPCFNPHQ 59

Query: 329 ESIVCAQKKSD 361
+V Q ++D
Sbjct: 60 CQLVLRQIRAD 70


>sp|Q9PU85|PIM3_COTJA Serine/threonine-protein kinase Pim-3
OS=Coturnix coturnix japonica GN=PIM3 PE=2 SV=1
Length = 323

Score = 29.6 bits (65), Expect = 9.8
Identities = 16/43 (37%), Positives = 25/43 (58%)
Frame = +2

Query: 179 GLPILLKRVVQKILRLVLSRGVGGVMIPIRIFSCKIVSRTYSG 307
GLP+ +K VV++ R+ +GGVM+P+ I K V + G
Sbjct: 63 GLPVAVKHVVKE--RVTEWGTIGGVMVPLEIVLLKKVGSGFRG 103


>sp|Q9VV96|PGSB2_DROME Peptidoglycan-recognition protein-SB2
OS=Drosophila melanogaster GN=PGRP-SB2 PE=2 SV=1
Length = 182

Score = 29.6 bits (65), Expect = 9.8
Identities = 20/71 (28%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Frame = +2

Query: 155 LQLAV*ICGLPILLKRVVQKI--LRLVLSRGVGGVMIPIRIFSCKIVSRTYSGFSFEPLS 328
LQLA+ +CGL + L ++V + + +S + +M+P+R+ I+ T + F P
Sbjct: 3 LQLALVLCGLTLALGQIVPRSSWCPVPISPRMPRLMVPVRLI---IIHHTVTAPCFNPHQ 59

Query: 329 ESIVCAQKKSD 361
+V Q ++D
Sbjct: 60 CQLVLRQIRAD 70


tr_hit_id Q1W557
Definition tr|Q1W557|Q1W557_PSEAE Putative uncharacterized protein OS=Pseudomonas aeruginosa
Align length 63
Score (bit) 36.2
E-value 1.1
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP916455|Adiantum capillus-veneris mRNA, clone:
YMU001_000087_H04.
(539 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q1W557|Q1W557_PSEAE Putative uncharacterized protein OS=Pseud... 36 1.1
tr|A9GLP6|A9GLP6_SORC5 Putative uncharacterized protein OS=Soran... 36 1.5
tr|B4GRS5|B4GRS5_DROPE GL25259 OS=Drosophila persimilis GN=GL252... 35 2.5
tr|B8MNW7|B8MNW7_9EURO rRNA processing protein Bystin, putative ... 34 4.3
tr|Q5CHY9|Q5CHY9_CRYHO Putative uncharacterized protein OS=Crypt... 29 4.9
tr|B0C985|B0C985_ACAM1 DNA repair protein RecN OS=Acaryochloris ... 34 5.6
tr|B5VY74|B5VY74_SPIMA Periplasmic protein TonB links inner and ... 34 5.6
tr|A1K6X3|A1K6X3_AZOSB Putative 2-oxo-1,2-dihydroquinoline 8-mon... 33 7.3
tr|B0DFL4|B0DFL4_LACBS Predicted protein OS=Laccaria bicolor (st... 33 9.5

>tr|Q1W557|Q1W557_PSEAE Putative uncharacterized protein
OS=Pseudomonas aeruginosa GN=EXA4 PE=4 SV=1
Length = 129

Score = 36.2 bits (82), Expect = 1.1
Identities = 18/63 (28%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Frame = +1

Query: 28 LQRLSASLQPYFTLFKNHLVLHIFNLGW-ISCKLHQPLRTSALLAIGRVDLWFANPPQES 204
+Q++ A + Y + K + + + GW I + P+R SA I ++ W A+ P+E+
Sbjct: 59 IQQILADMSSYLGVSKELIRSRLIDFGWLIDVRRVLPVRDSAARVIDNLESWAADEPEEN 118

Query: 205 RPE 213
PE
Sbjct: 119 APE 121


>tr|A9GLP6|A9GLP6_SORC5 Putative uncharacterized protein
OS=Sorangium cellulosum (strain So ce56) GN=sce0147 PE=4
SV=1
Length = 313

Score = 35.8 bits (81), Expect = 1.5
Identities = 14/37 (37%), Positives = 27/37 (72%)
Frame = +2

Query: 173 ICGLPILLKRVVQKILRLVLSRGVGGVMIPIRIFSCK 283
+ GL + L+R+V ++L +VLSRG+ GV + + ++C+
Sbjct: 128 LLGLSLRLRRMVHRLLLMVLSRGLSGVELTLGFYTCQ 164


>tr|B4GRS5|B4GRS5_DROPE GL25259 OS=Drosophila persimilis GN=GL25259
PE=4 SV=1
Length = 950

Score = 35.0 bits (79), Expect = 2.5
Identities = 20/48 (41%), Positives = 26/48 (54%)
Frame = -2

Query: 262 GNHDSTNPSTKDESKYLLDDSLEEDWQTTDLHGQLQVKHLYEEVDEVC 119
GNH +N S+ DES S +E D HG + KHL+EE+ VC
Sbjct: 384 GNHSGSNLSSDDESV-----SEDEFGLEIDDHGVIDFKHLFEELCPVC 426


>tr|B8MNW7|B8MNW7_9EURO rRNA processing protein Bystin, putative
OS=Talaromyces stipitatus ATCC 10500 GN=TSTA_104260 PE=4
SV=1
Length = 512

Score = 34.3 bits (77), Expect = 4.3
Identities = 20/52 (38%), Positives = 28/52 (53%)
Frame = -2

Query: 325 QRLEGETGVGSRHNFAREDSDGNHDSTNPSTKDESKYLLDDSLEEDWQTTDL 170
Q+L ETG G +HN A + S D + ++DE K+ EEDW+ DL
Sbjct: 84 QKLLDETGAGQQHNKAFDFSARFGDENDYISEDEEKF-----EEEDWEDEDL 130


>tr|Q5CHY9|Q5CHY9_CRYHO Putative uncharacterized protein
OS=Cryptosporidium hominis GN=Chro.80087 PE=4 SV=1
Length = 774

Score = 28.9 bits (63), Expect(2) = 4.9
Identities = 17/64 (26%), Positives = 27/64 (42%)
Frame = -2

Query: 418 SSRLHWYQSFSIFSSQEEAVRFFLSTHYGL*QRLEGETGVGSRHNFAREDSDGNHDSTNP 239
S ++Y+ F I A+ +F Y R+EGE G+G + +G + N
Sbjct: 17 SLEYNYYEEFLILIGYSLALEYFCEAIYACILRVEGENGLGIIKKYDPFKKEGVNLIVNK 76

Query: 238 STKD 227
S D
Sbjct: 77 SIND 80



Score = 23.9 bits (50), Expect(2) = 4.9
Identities = 17/57 (29%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Frame = -3

Query: 237 LLRTSLSIFWTTLLRR-IGKPQIYTANCK*STCTKRLMKFARDPT*IKNMKNQMILE 70
L + +L+I + LL R IG +I +CK S + + K K +KN+ ++E
Sbjct: 91 LFQENLTIDGSHLLHRFIGNDKIKPESCKISFIKELVQKIKEIENLKKGLKNEELIE 147


>tr|B0C985|B0C985_ACAM1 DNA repair protein RecN OS=Acaryochloris
marina (strain MBIC 11017) GN=recN PE=4 SV=1
Length = 594

Score = 33.9 bits (76), Expect = 5.6
Identities = 16/44 (36%), Positives = 25/44 (56%)
Frame = +3

Query: 378 ENILKL*YQCNRLDTDKTINPQQHTQIEQNFEQLKSSQDMKQQS 509
+NI L YQ LD +P + T +EQ ++L S +++QQS
Sbjct: 188 QNIDLLRYQLQELDAANLSDPNEQTNLEQELQRLSHSVELEQQS 231


>tr|B5VY74|B5VY74_SPIMA Periplasmic protein TonB links inner and outer
membranes-like protein OS=Arthrospira maxima CS-328
GN=AmaxDRAFT_1466 PE=4 SV=1
Length = 2523

Score = 33.9 bits (76), Expect = 5.6
Identities = 26/95 (27%), Positives = 44/95 (46%), Gaps = 6/95 (6%)
Frame = -2

Query: 439 GFIVLSVSSRLHWYQSFSIFS------SQEEAVRFFLSTHYGL*QRLEGETGVGSRHNFA 278
GF+V S+ L + S +QEE + FF ST GET VG +
Sbjct: 1412 GFVVSRFSTELAEFFDLSSEEFAAKEFTQEEIIEFFSSTQAEAIAEFLGETVVGGEDDDD 1471

Query: 277 REDSDGNHDSTNPSTKDESKYLLDDSLEEDWQTTD 173
+D D ++ ++D+ + ++D+S ++D Q D
Sbjct: 1472 LDDDQDIVDESDDDSQDDDQDIVDES-DDDSQDDD 1505


>tr|A1K6X3|A1K6X3_AZOSB Putative 2-oxo-1,2-dihydroquinoline
8-monooxygenase,oxygenase component OS=Azoarcus sp.
(strain BH72) GN=oxoO1 PE=4 SV=1
Length = 446

Score = 33.5 bits (75), Expect = 7.3
Identities = 22/52 (42%), Positives = 31/52 (59%), Gaps = 3/52 (5%)
Frame = +2

Query: 173 ICGLPILLKRVVQKILRL---VLSRGVGGVMIPIRIFSCKIVSRTYSGFSFE 319
ICG+PI+L+RV K+ L L RGV P+ F+ K +S Y GF+F+
Sbjct: 65 ICGIPIVLRRVDGKVYALKDQCLHRGVRLSEKPM-CFNKKTISCWYHGFTFD 115


>tr|B0DFL4|B0DFL4_LACBS Predicted protein OS=Laccaria bicolor (strain
S238N-H82) GN=LACBIDRAFT_328662 PE=4 SV=1
Length = 1080

Score = 33.1 bits (74), Expect = 9.5
Identities = 21/55 (38%), Positives = 27/55 (49%)
Frame = -2

Query: 319 LEGETGVGSRHNFAREDSDGNHDSTNPSTKDESKYLLDDSLEEDWQTTDLHGQLQ 155
LEGE GVGS E G + T ++ S Y LDD EE+ + GQL+
Sbjct: 951 LEGEAGVGSSSGGEHE---GKRERTESASGSSSAYSLDDDAEEE----EAEGQLE 998