BP916456
Clone id YMU001_000087_H05
Library
Length 529
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000087_H05.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
AATATTCCCTTGTCTCCTTGACCATTGATACCATGTGGAGTGATTATTCGCCCCCTAAGA
ATTTAACTTTTGGTAATTGCCCATCTTACAAATGATAACTATGTTCGTGGACTCGTCGAC
TAAAGGATTGTTTAATCAACCTTCTGTTCCCTTGCTTTCAAAAAATTAAAAGACTCCAGC
TGCTTCACATCTCCTCCATGCTCAGAATCAAATGAAAACTTGTAGAAACTACACAAACAG
CATATCAATTAGAGCAAGGCAATGAGCACATGTGCCTATGGGCCAAGCTTGGCAACCCAA
AATAATTGTTGTGCCTTCACAGGTGCTAGCCATAATTTTGCACATGGAGATGCATAGATA
CATCTGAAAAATACCTACATTCATGGATATATTATGCACAGATGTATCGACTCAACACCA
AAAAGAATCCATAACCAGCCATTTTCCACCGCGACCCTTGTTAGTATGTGATAAACACTA
TCACGACCCTTTCACATGCATCAAATTGCAACATGAAGCATGCATGACC
■■Homology search results ■■ -
sp_hit_id Q54G28
Definition sp|Q54G28|YTYK1_DICDI Probable tyrosine-protein kinase DDB_G0290471 OS=Dictyostelium discoideum
Align length 35
Score (bit) 31.2
E-value 3.2
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP916456|Adiantum capillus-veneris mRNA, clone:
YMU001_000087_H05.
(529 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q54G28|YTYK1_DICDI Probable tyrosine-protein kinase DDB_G0290... 31 3.2
sp|P26652|TIMP3_CHICK Metalloproteinase inhibitor 3 OS=Gallus ga... 30 7.2

>sp|Q54G28|YTYK1_DICDI Probable tyrosine-protein kinase DDB_G0290471
OS=Dictyostelium discoideum GN=DDB_G0290471 PE=3 SV=1
Length = 352

Score = 31.2 bits (69), Expect = 3.2
Identities = 14/35 (40%), Positives = 22/35 (62%), Gaps = 7/35 (20%)
Frame = -3

Query: 485 RDSVYHILTRVAVENGW-------LWILFGVESIH 402
RDS+YHI+T +E GW + I+ G++S+H
Sbjct: 130 RDSLYHIMTDRLIEIGWNRFFQFSMQIILGLQSLH 164


>sp|P26652|TIMP3_CHICK Metalloproteinase inhibitor 3 OS=Gallus
gallus GN=TIMP3 PE=1 SV=2
Length = 212

Score = 30.0 bits (66), Expect = 7.2
Identities = 13/38 (34%), Positives = 17/38 (44%)
Frame = +1

Query: 232 HKQHIN*SKAMSTCAYGPSLATQNNCCAFTGASHNFAH 345
H+ H+ + C Y P AT N C +T NF H
Sbjct: 138 HRYHLGCGCKIRPCYYLPCFATSKNECIWTDMLSNFGH 175


tr_hit_id A7PS31
Definition tr|A7PS31|A7PS31_VITVI Chromosome chr14 scaffold_27, whole genome shotgun sequence OS=Vitis vinifera
Align length 28
Score (bit) 34.7
E-value 3.0
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP916456|Adiantum capillus-veneris mRNA, clone:
YMU001_000087_H05.
(529 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A7PS31|A7PS31_VITVI Chromosome chr14 scaffold_27, whole genom... 35 3.0
tr|A5B8T7|A5B8T7_VITVI Putative uncharacterized protein OS=Vitis... 35 3.0
tr|Q8LR61|Q8LR61_ORYSJ cDNA clone:001-029-C10, full insert seque... 34 4.0
tr|Q0WPK3|Q0WPK3_ARATH Putative uncharacterized protein At3g5644... 34 4.0
tr|B6SUF7|B6SUF7_MAIZE WD-repeat domain phosphoinositide-interac... 34 4.0
tr|A2WYS0|A2WYS0_ORYSI Putative uncharacterized protein OS=Oryza... 34 4.0
tr|A7PTV3|A7PTV3_VITVI Chromosome chr7 scaffold_31, whole genome... 33 8.8
tr|A5AVB9|A5AVB9_VITVI Putative uncharacterized protein OS=Vitis... 33 8.8

>tr|A7PS31|A7PS31_VITVI Chromosome chr14 scaffold_27, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00022737001
PE=4 SV=1
Length = 209

Score = 34.7 bits (78), Expect = 3.0
Identities = 15/28 (53%), Positives = 19/28 (67%)
Frame = -3

Query: 230 SFYKFSFDSEHGGDVKQLESFNFLKARE 147
SFY+ FD GG++ QLE +NFLK E
Sbjct: 180 SFYRCQFDPVAGGEMTQLEYYNFLKPEE 207


>tr|A5B8T7|A5B8T7_VITVI Putative uncharacterized protein OS=Vitis
vinifera GN=VITISV_044410 PE=4 SV=1
Length = 412

Score = 34.7 bits (78), Expect = 3.0
Identities = 15/28 (53%), Positives = 19/28 (67%)
Frame = -3

Query: 230 SFYKFSFDSEHGGDVKQLESFNFLKARE 147
SFY+ FD GG++ QLE +NFLK E
Sbjct: 383 SFYRCQFDPVAGGEMTQLEYYNFLKPEE 410


>tr|Q8LR61|Q8LR61_ORYSJ cDNA clone:001-029-C10, full insert sequence
OS=Oryza sativa subsp. japonica GN=P0423A12.30 PE=2 SV=1
Length = 457

Score = 34.3 bits (77), Expect = 4.0
Identities = 14/25 (56%), Positives = 19/25 (76%)
Frame = -3

Query: 230 SFYKFSFDSEHGGDVKQLESFNFLK 156
SFY+ FD +GG++ QLE +NFLK
Sbjct: 426 SFYRCQFDPVNGGEMLQLECYNFLK 450


>tr|Q0WPK3|Q0WPK3_ARATH Putative uncharacterized protein At3g56440
OS=Arabidopsis thaliana GN=At3g56440 PE=2 SV=1
Length = 391

Score = 34.3 bits (77), Expect = 4.0
Identities = 14/25 (56%), Positives = 20/25 (80%)
Frame = -3

Query: 230 SFYKFSFDSEHGGDVKQLESFNFLK 156
SFY+ +FD +GG++ QLE F+FLK
Sbjct: 362 SFYRCNFDPVNGGEMTQLEHFHFLK 386


>tr|B6SUF7|B6SUF7_MAIZE WD-repeat domain
phosphoinositide-interacting protein 3 OS=Zea mays PE=2
SV=1
Length = 443

Score = 34.3 bits (77), Expect = 4.0
Identities = 14/29 (48%), Positives = 21/29 (72%)
Frame = -3

Query: 230 SFYKFSFDSEHGGDVKQLESFNFLKAREQ 144
SFY+ FD +GG++ QLE ++FLK +Q
Sbjct: 414 SFYRCQFDPVNGGEMLQLECYSFLKPSDQ 442


>tr|A2WYS0|A2WYS0_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_05078 PE=4 SV=1
Length = 455

Score = 34.3 bits (77), Expect = 4.0
Identities = 14/25 (56%), Positives = 19/25 (76%)
Frame = -3

Query: 230 SFYKFSFDSEHGGDVKQLESFNFLK 156
SFY+ FD +GG++ QLE +NFLK
Sbjct: 424 SFYRCQFDPVNGGEMLQLECYNFLK 448


>tr|A7PTV3|A7PTV3_VITVI Chromosome chr7 scaffold_31, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00023544001
PE=4 SV=1
Length = 439

Score = 33.1 bits (74), Expect = 8.8
Identities = 15/28 (53%), Positives = 18/28 (64%)
Frame = -3

Query: 230 SFYKFSFDSEHGGDVKQLESFNFLKARE 147
SFY+ FD GG++ QLE NFLK E
Sbjct: 410 SFYRCQFDPVTGGEMTQLEYHNFLKPEE 437


>tr|A5AVB9|A5AVB9_VITVI Putative uncharacterized protein OS=Vitis
vinifera GN=VITISV_032850 PE=4 SV=1
Length = 428

Score = 33.1 bits (74), Expect = 8.8
Identities = 15/28 (53%), Positives = 18/28 (64%)
Frame = -3

Query: 230 SFYKFSFDSEHGGDVKQLESFNFLKARE 147
SFY+ FD GG++ QLE NFLK E
Sbjct: 399 SFYRCQFDPVTGGEMTQLEYHNFLKPEE 426