BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP916460|Adiantum capillus-veneris mRNA, clone:
YMU001_000087_H09.
         (479 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|A4XKM9|SPEE_CALS8 Spermidine synthase OS=Caldicellulosiruptor...    30   7.4  
sp|Q9UM47|NOTC3_HUMAN Neurogenic locus notch homolog protein 3 O...    30   7.4  
sp|Q4L6D3|MSRB_STAHJ Peptide methionine sulfoxide reductase msrB...    29   9.6  
sp|P51868|CASQ2_RAT Calsequestrin-2 OS=Rattus norvegicus GN=Casq...    29   9.6  

>sp|A4XKM9|SPEE_CALS8 Spermidine synthase OS=Caldicellulosiruptor
           saccharolyticus (strain ATCC 43494 / DSM 8903) GN=speE
           PE=3 SV=1
          Length = 278

 Score = 29.6 bits (65), Expect = 7.4
 Identities = 17/44 (38%), Positives = 25/44 (56%), Gaps = 3/44 (6%)
 Frame = -1

Query: 425 TKVPFAEQD*SLKNGPECLKAIIPIRN---GTIPTYTNKKWHYT 303
           T+ PF +QD  ++N    +K+I PI     G IPTY +  W +T
Sbjct: 192 TESPFYDQD-LIRNVFHSIKSIFPITRLYLGFIPTYPSGLWSFT 234


>sp|Q9UM47|NOTC3_HUMAN Neurogenic locus notch homolog protein 3
            OS=Homo sapiens GN=NOTCH3 PE=1 SV=1
          Length = 2321

 Score = 29.6 bits (65), Expect = 7.4
 Identities = 15/38 (39%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
 Frame = -1

Query: 203  HCQLELPPCLHQPPVQVLVASSASP-FQTSCV*TLPKP 93
            HCQ E  PCL +P +   V S+A P F+ +C+ +   P
Sbjct: 958  HCQHEADPCLSRPCLHGGVCSAAHPGFRCTCLESFTGP 995


>sp|Q4L6D3|MSRB_STAHJ Peptide methionine sulfoxide reductase msrB
           OS=Staphylococcus haemolyticus (strain JCSC1435) GN=msrB
           PE=3 SV=1
          Length = 142

 Score = 29.3 bits (64), Expect = 9.6
 Identities = 12/39 (30%), Positives = 23/39 (58%)
 Frame = -1

Query: 389 KNGPECLKAIIPIRNGTIPTYTNKKWHYTDKAIQVELLA 273
           KN    ++ ++   NGT P + N+ W++ DK I V+ ++
Sbjct: 6   KNELNEMEYLVTQENGTEPPFQNEYWNHFDKGIYVDKIS 44


>sp|P51868|CASQ2_RAT Calsequestrin-2 OS=Rattus norvegicus GN=Casq2
           PE=1 SV=2
          Length = 413

 Score = 29.3 bits (64), Expect = 9.6
 Identities = 20/64 (31%), Positives = 33/64 (51%)
 Frame = -2

Query: 475 SFREASHCLNKPTWESRLRYPLLSKISLLKMAQNA*KPLYQ*EMALYQHIPIKNGTIPIK 296
           SF  A   LN PT++ + R   LS+ +L ++ +      Y   + LY H P+ +  +  K
Sbjct: 15  SFSRAEEGLNFPTYDGKDRVVSLSEKNLKQVLKR-----YD-LLCLYYHEPVSSDKVAQK 68

Query: 295 QFRL 284
           QF+L
Sbjct: 69  QFQL 72

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP916460|Adiantum capillus-veneris mRNA, clone:
YMU001_000087_H09.
         (479 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done

 ***** No hits found ******