BP916467 |
Clone id |
YMU001_000088_A06 |
Library |
YMU01 |
Length |
420 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000088_A06. |
Accession |
BP916467 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
TCAACAGATGCTCCAGCAAGAGGCGCAATTGTGGGTGATGGTGTACGGATACACAGCCTA TCACTTCCAGGAATTGTTTCGAGAACATCAATACATTTTTCAGGACCAGGAGAAGTTCTC TCCTTTCAGCATGATATGAATGATGTGCAGGCATGCATGCCTGGCCTCTTGATAGCGATT CGTCGAGTACTGAAACTCGAGTCTCTGGTATATGGCCTAGAAAAGGTTCTCTGAAGGATC TGAACAGCAAAAAAAGAGATTATCACCCTCATCATAAAGATGTGCAGCTCTAGAATATAT GCTTACAGCTGCAAGCATAATTGGTGCCATCCTCATAATATGTATCCTTTGGTAATCAGT TTTGATATAACGAAATTTCGTGACTCGGTTTTTGGTCGAATGGTGTGACAGATGAGTGGG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9FJ82 |
Definition |
sp|Q9FJ82|DAPB3_ARATH Putative dihydrodipicolinate reductase 3, chloroplastic OS=Arabidopsis thaliana |
Align length |
78 |
Score (bit) |
97.1 |
E-value |
3.0e-20 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9U3Q9 |
Definition |
tr|A9U3Q9|A9U3Q9_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens |
Align length |
73 |
Score (bit) |
105.0 |
E-value |
9.0e-22 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP916467|Adiantum capillus-veneris mRNA, clone: YMU001_000088_A06. (420 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9U3Q9|A9U3Q9_PHYPA Predicted protein (Fragment) OS=Physcomit... 105 9e-22 tr|Q8H053|Q8H053_ORYSJ Putative dihydrodipicolinate reductase-li... 103 3e-21 tr|Q10SL7|Q10SL7_ORYSJ cDNA clone:001-046-A07, full insert seque... 103 3e-21 tr|Q10SL6|Q10SL6_ORYSJ Os03g0118600 protein OS=Oryza sativa subs... 103 3e-21 tr|B8ALW1|B8ALW1_ORYSI Putative uncharacterized protein OS=Oryza... 103 4e-21 tr|Q10SM9|Q10SM9_ORYSJ Dihydrodipicolinate reductase, N-terminus... 100 3e-20 tr|A5BWJ3|A5BWJ3_VITVI Putative uncharacterized protein (Chromos... 100 3e-20 tr|A3ADH3|A3ADH3_ORYSJ Putative uncharacterized protein OS=Oryza... 100 3e-20 tr|B6TVJ6|B6TVJ6_MAIZE Dihydrodipicolinate reductase OS=Zea mays... 97 3e-19 tr|B6TCY5|B6TCY5_MAIZE Dihydrodipicolinate reductase OS=Zea mays... 97 3e-19 tr|B8ALV5|B8ALV5_ORYSI Putative uncharacterized protein OS=Oryza... 86 7e-16 tr|B4AZ18|B4AZ18_9CHRO Dihydrodipicolinate reductase OS=Cyanothe... 86 9e-16 tr|B8HRK9|B8HRK9_9CHRO Dihydrodipicolinate reductase OS=Cyanothe... 85 2e-15 tr|A0ZBM1|A0ZBM1_NODSP Dihydrodipicolinate reductase OS=Nodulari... 83 6e-15 tr|B2J0A9|B2J0A9_NOSP7 Dihydrodipicolinate reductase OS=Nostoc p... 82 1e-14 tr|B0JU93|B0JU93_MICAN Dihydrodipicolinate reductase OS=Microcys... 82 1e-14 tr|A8YA16|A8YA16_MICAE Similar to Q4C722_CROWT Dihydrodipicolina... 82 2e-14 tr|A0YTJ0|A0YTJ0_9CYAN Dihydrodipicolinate reductase OS=Lyngbya ... 81 2e-14 tr|B7JW41|B7JW41_SYNP8 Dihydrodipicolinate reductase OS=Synechoc... 80 4e-14 tr|B4C0F7|B4C0F7_9CHRO Dihydrodipicolinate reductase OS=Cyanothe... 80 4e-14 tr|B4VQ48|B4VQ48_9CYAN Dihydrodipicolinate reductase OS=Microcol... 80 5e-14 tr|Q4C722|Q4C722_CROWT Dihydrodipicolinate reductase OS=Crocosph... 80 7e-14 tr|B5VUP2|B5VUP2_SPIMA Dihydrodipicolinate reductase OS=Arthrosp... 80 7e-14 tr|B1XIL4|B1XIL4_SYNP2 Dihydrodipicolinate reductase OS=Synechoc... 78 2e-13 tr|B4WJU3|B4WJU3_9SYNE Dihydrodipicolinate reductase OS=Synechoc... 78 2e-13 tr|Q2JUX2|Q2JUX2_SYNJA Dihydrodipicolinate reductase OS=Synechoc... 77 3e-13 tr|A3ZAN8|A3ZAN8_9SYNE Dihydrodipicolinate reductase OS=Synechoc... 77 6e-13 tr|B1WVV1|B1WVV1_CYAA5 Dihydrodipicolinate reductase OS=Cyanothe... 76 7e-13 tr|Q2JMX5|Q2JMX5_SYNJB Dihydrodipicolinate reductase OS=Synechoc... 76 9e-13 tr|A5GLQ0|A5GLQ0_SYNPW Dihydrodipicolinate reductase OS=Synechoc... 75 2e-12
>tr|A9U3Q9|A9U3Q9_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_155580 PE=4 SV=1 Length = 263
Score = 105 bits (263), Expect = 9e-22 Identities = 50/73 (68%), Positives = 65/73 (89%), Gaps = 1/73 (1%) Frame = +1
Query: 16 ARGAIVGDGVRIHSLSLPGIVSRTSIHFSGPGEV-LSFQHDMNDVQACMPGLLIAIRRVL 192 ARG IVGDGVRIHS++LPG++S + F+GPGEV LSF+HD+ DV+A MPGL++AIRRV+ Sbjct: 191 ARGDIVGDGVRIHSMALPGLISSVDVRFAGPGEVTLSFRHDVTDVKALMPGLIMAIRRVV 250
Query: 193 KLESLVYGLEKVL 231 +L+SLVYGLEK+L Sbjct: 251 RLKSLVYGLEKIL 263
>tr|Q8H053|Q8H053_ORYSJ Putative dihydrodipicolinate reductase-like protein (Putative uncharacterized protein) OS=Oryza sativa subsp. japonica GN=OJ1263H11.2 PE=4 SV=1 Length = 463
Score = 103 bits (258), Expect = 3e-21 Identities = 47/77 (61%), Positives = 65/77 (84%), Gaps = 1/77 (1%) Frame = +1
Query: 4 TDAPARGAIVG-DGVRIHSLSLPGIVSRTSIHFSGPGEVLSFQHDMNDVQACMPGLLIAI 180 +D PARG I+G DGVR+HS+ LPG+ S TSIHFSGPGE+ + +HD+ +VQ MPGL++AI Sbjct: 387 SDNPARGQILGEDGVRVHSMVLPGLASSTSIHFSGPGEIYTLRHDVTNVQCLMPGLILAI 446
Query: 181 RRVLKLESLVYGLEKVL 231 R+V++L++L+YGLEK L Sbjct: 447 RKVIRLKNLIYGLEKFL 463
>tr|Q10SL7|Q10SL7_ORYSJ cDNA clone:001-046-A07, full insert sequence OS=Oryza sativa subsp. japonica GN=LOC_Os03g02690 PE=2 SV=1 Length = 335
Score = 103 bits (258), Expect = 3e-21 Identities = 47/77 (61%), Positives = 65/77 (84%), Gaps = 1/77 (1%) Frame = +1
Query: 4 TDAPARGAIVG-DGVRIHSLSLPGIVSRTSIHFSGPGEVLSFQHDMNDVQACMPGLLIAI 180 +D PARG I+G DGVR+HS+ LPG+ S TSIHFSGPGE+ + +HD+ +VQ MPGL++AI Sbjct: 259 SDNPARGQILGEDGVRVHSMVLPGLASSTSIHFSGPGEIYTLRHDVTNVQCLMPGLILAI 318
Query: 181 RRVLKLESLVYGLEKVL 231 R+V++L++L+YGLEK L Sbjct: 319 RKVIRLKNLIYGLEKFL 335
>tr|Q10SL6|Q10SL6_ORYSJ Os03g0118600 protein OS=Oryza sativa subsp. japonica GN=Os03g0118600 PE=2 SV=1 Length = 301
Score = 103 bits (258), Expect = 3e-21 Identities = 47/77 (61%), Positives = 65/77 (84%), Gaps = 1/77 (1%) Frame = +1
Query: 4 TDAPARGAIVG-DGVRIHSLSLPGIVSRTSIHFSGPGEVLSFQHDMNDVQACMPGLLIAI 180 +D PARG I+G DGVR+HS+ LPG+ S TSIHFSGPGE+ + +HD+ +VQ MPGL++AI Sbjct: 225 SDNPARGQILGEDGVRVHSMVLPGLASSTSIHFSGPGEIYTLRHDVTNVQCLMPGLILAI 284
Query: 181 RRVLKLESLVYGLEKVL 231 R+V++L++L+YGLEK L Sbjct: 285 RKVIRLKNLIYGLEKFL 301
>tr|B8ALW1|B8ALW1_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_09752 PE=4 SV=1 Length = 301
Score = 103 bits (257), Expect = 4e-21 Identities = 47/76 (61%), Positives = 64/76 (84%), Gaps = 1/76 (1%) Frame = +1
Query: 7 DAPARGAIVG-DGVRIHSLSLPGIVSRTSIHFSGPGEVLSFQHDMNDVQACMPGLLIAIR 183 D PARG I+G DGVR+HS+ LPG+ S TSIHFSGPGE+ + +HD+ +VQ MPGL++AIR Sbjct: 226 DNPARGQILGEDGVRVHSMVLPGLASSTSIHFSGPGEIYTLRHDVTNVQCLMPGLILAIR 285
Query: 184 RVLKLESLVYGLEKVL 231 +V++L++L+YGLEK L Sbjct: 286 KVIRLKNLIYGLEKFL 301
>tr|Q10SM9|Q10SM9_ORYSJ Dihydrodipicolinate reductase, N-terminus family protein OS=Oryza sativa subsp. japonica GN=LOC_Os03g02570 PE=4 SV=1 Length = 298
Score = 100 bits (250), Expect = 3e-20 Identities = 46/77 (59%), Positives = 65/77 (84%), Gaps = 1/77 (1%) Frame = +1
Query: 4 TDAPARGAIVG-DGVRIHSLSLPGIVSRTSIHFSGPGEVLSFQHDMNDVQACMPGLLIAI 180 +D PARG I+G DGVR+HS+ LPG+ S TSI+FSGPGE+ + +HD+ +VQ MPGL++AI Sbjct: 222 SDNPARGQILGEDGVRVHSMVLPGLASSTSINFSGPGEIYTLRHDVTNVQCLMPGLILAI 281
Query: 181 RRVLKLESLVYGLEKVL 231 R+V++L++L+YGLEK L Sbjct: 282 RKVVRLKNLIYGLEKFL 298
>tr|A5BWJ3|A5BWJ3_VITVI Putative uncharacterized protein (Chromosome chr16 scaffold_189, whole genome shotgun sequence) OS=Vitis vinifera GN=GSVIVT00007398001 PE=4 SV=1 Length = 302
Score = 100 bits (250), Expect = 3e-20 Identities = 47/78 (60%), Positives = 65/78 (83%), Gaps = 1/78 (1%) Frame = +1
Query: 1 STDAPARGAIVG-DGVRIHSLSLPGIVSRTSIHFSGPGEVLSFQHDMNDVQACMPGLLIA 177 STD ARG ++G DG+R+HSL LPG+ S T+++FSGPGEV S +HD+ DV+ MPGL++A Sbjct: 225 STDILARGQVLGEDGIRVHSLVLPGLPSSTTVYFSGPGEVYSLKHDITDVRCLMPGLILA 284
Query: 178 IRRVLKLESLVYGLEKVL 231 IR+V++L++LVYGLEK L Sbjct: 285 IRKVVRLKNLVYGLEKFL 302
>tr|A3ADH3|A3ADH3_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_008845 PE=4 SV=1 Length = 297
Score = 100 bits (250), Expect = 3e-20 Identities = 46/77 (59%), Positives = 65/77 (84%), Gaps = 1/77 (1%) Frame = +1
Query: 4 TDAPARGAIVG-DGVRIHSLSLPGIVSRTSIHFSGPGEVLSFQHDMNDVQACMPGLLIAI 180 +D PARG I+G DGVR+HS+ LPG+ S TSI+FSGPGE+ + +HD+ +VQ MPGL++AI Sbjct: 221 SDNPARGQILGEDGVRVHSMVLPGLASSTSINFSGPGEIYTLRHDVTNVQCLMPGLILAI 280
Query: 181 RRVLKLESLVYGLEKVL 231 R+V++L++L+YGLEK L Sbjct: 281 RKVVRLKNLIYGLEKFL 297
>tr|B6TVJ6|B6TVJ6_MAIZE Dihydrodipicolinate reductase OS=Zea mays PE=2 SV=1 Length = 315
Score = 97.4 bits (241), Expect = 3e-19 Identities = 44/77 (57%), Positives = 65/77 (84%), Gaps = 1/77 (1%) Frame = +1
Query: 4 TDAPARGAIVG-DGVRIHSLSLPGIVSRTSIHFSGPGEVLSFQHDMNDVQACMPGLLIAI 180 + +PARG ++G DGVR+HS+ LPG+VS TSI+FSGPGE+ + +HD+ +VQ MPGL++AI Sbjct: 239 SSSPARGQLLGEDGVRVHSMVLPGLVSSTSINFSGPGEMYTLRHDVANVQCLMPGLILAI 298
Query: 181 RRVLKLESLVYGLEKVL 231 R+V++ ++L+YGLEK L Sbjct: 299 RKVVRFKNLIYGLEKFL 315
>tr|B6TCY5|B6TCY5_MAIZE Dihydrodipicolinate reductase OS=Zea mays PE=2 SV=1 Length = 313
Score = 97.4 bits (241), Expect = 3e-19 Identities = 44/77 (57%), Positives = 65/77 (84%), Gaps = 1/77 (1%) Frame = +1
Query: 4 TDAPARGAIVG-DGVRIHSLSLPGIVSRTSIHFSGPGEVLSFQHDMNDVQACMPGLLIAI 180 + +PARG ++G DGVR+HS+ LPG+VS TSI+FSGPGE+ + +HD+ +VQ MPGL++AI Sbjct: 237 SSSPARGQLLGEDGVRVHSMVLPGLVSSTSINFSGPGEMYTLRHDVANVQCLMPGLILAI 296
Query: 181 RRVLKLESLVYGLEKVL 231 R+V++ ++L+YGLEK L Sbjct: 297 RKVVRFKNLIYGLEKFL 313
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