BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP916469|Adiantum capillus-veneris mRNA, clone:
YMU001_000088_A08.
         (280 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9M2L4|ACA11_ARATH Putative calcium-transporting ATPase 11, p...    33   0.34 
sp|A8GPM9|DNLJ_RICAH DNA ligase OS=Rickettsia akari (strain Hart...    33   0.58 
sp|Q4UN15|DNLJ_RICFE DNA ligase OS=Rickettsia felis GN=ligA PE=3...    32   1.3  
sp|Q5WEJ6|SYFB_BACSK Phenylalanyl-tRNA synthetase beta chain OS=...    31   2.2  
sp|Q2QMX9|ACA1_ORYSJ Calcium-transporting ATPase 1, plasma membr...    31   2.2  
sp|A8EZT5|DNLJ_RICCK DNA ligase OS=Rickettsia canadensis (strain...    30   3.7  
sp|P19401|M12_STRPY M protein, serotype 12 (Fragment) OS=Strepto...    30   4.9  
sp|Q12SM7|ASSY_SHEDO Argininosuccinate synthase OS=Shewanella de...    30   4.9  
sp|Q9C9A2|PP112_ARATH Pentatricopeptide repeat-containing protei...    29   8.3  
sp|Q9CR40|KLH28_MOUSE Kelch-like protein 28 OS=Mus musculus GN=K...    29   8.3  
sp|Q089K8|ASSY_SHEFN Argininosuccinate synthase OS=Shewanella fr...    29   8.3  

>sp|Q9M2L4|ACA11_ARATH Putative calcium-transporting ATPase 11,
           plasma membrane-type OS=Arabidopsis thaliana GN=ACA11
           PE=2 SV=1
          Length = 1025

 Score = 33.5 bits (75), Expect = 0.34
 Identities = 26/91 (28%), Positives = 37/91 (40%), Gaps = 2/91 (2%)
 Frame = +1

Query: 4   EKRKTAMSAQRKVRTGITATRAALKFIEGGLIASNTASNVKEAVAKAEKHGFKTHAQELT 183
           E  K     Q K+R      +AA +FI+ G      A    +   + +K GF   A EL 
Sbjct: 48  ENEKKRCQIQEKIRVVFYVQKAAFQFIDAG------ARPEYKLTDEVKKAGFYVEADELA 101

Query: 184 RL--NEKIGVYNALGRLQGIADKLQVPSLEG 270
            +  N        +G  +GIA K+ V   EG
Sbjct: 102 SMVRNHDTKSLTKIGGPEGIAQKVSVSLAEG 132


>sp|A8GPM9|DNLJ_RICAH DNA ligase OS=Rickettsia akari (strain
           Hartford) GN=ligA PE=3 SV=1
          Length = 689

 Score = 32.7 bits (73), Expect = 0.58
 Identities = 21/66 (31%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
 Frame = +1

Query: 10  RKTAMSAQRKVRTGITATRAALKFI-EGGLIASNTASNVKEAVAKAEKHGFKTH-AQELT 183
           R  A  + R++   ITA R    F+  GG+   N AS+  + + K +K GF  +   +LT
Sbjct: 206 RNAAAGSLRQLDASITAKRPLKYFVYSGGVTEQNLASSQDQLLTKLKKFGFSVNEISKLT 265

Query: 184 RLNEKI 201
           +  E+I
Sbjct: 266 KSEEEI 271


>sp|Q4UN15|DNLJ_RICFE DNA ligase OS=Rickettsia felis GN=ligA PE=3
           SV=2
          Length = 689

 Score = 31.6 bits (70), Expect = 1.3
 Identities = 20/66 (30%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
 Frame = +1

Query: 10  RKTAMSAQRKVRTGITATRAALKFI-EGGLIASNTASNVKEAVAKAEKHGFKTH-AQELT 183
           R  A  + R++   ITA R+   F+  GG+   N AS+ ++ + K ++ GF  +   +LT
Sbjct: 206 RNAAAGSLRQLDASITAQRSLKYFVYSGGVTEQNLASSQEQLLIKLKEFGFSVNEISKLT 265

Query: 184 RLNEKI 201
              E+I
Sbjct: 266 NSEEEI 271


>sp|Q5WEJ6|SYFB_BACSK Phenylalanyl-tRNA synthetase beta chain
           OS=Bacillus clausii (strain KSM-K16) GN=pheT PE=3 SV=1
          Length = 808

 Score = 30.8 bits (68), Expect = 2.2
 Identities = 23/81 (28%), Positives = 39/81 (48%), Gaps = 2/81 (2%)
 Frame = +1

Query: 43  RTGITATRAA--LKFIEGGLIASNTASNVKEAVAKAEKHGFKTHAQELTRLNEKIGVYNA 216
           R    A RAA  ++ I GG++ S  A      +A A     +  A +L ++NE+IG   +
Sbjct: 379 RVSEAARRAAYLIQEIAGGIVLSGAA------IADARVRSERVIALDLDKMNERIGTNLS 432

Query: 217 LGRLQGIADKLQVPSLEGGID 279
           +  +  +  +LQ P  + G D
Sbjct: 433 IMEVAALMRRLQFPCEKVGSD 453


>sp|Q2QMX9|ACA1_ORYSJ Calcium-transporting ATPase 1, plasma
           membrane-type OS=Oryza sativa subsp. japonica
           GN=Os12g0586600 PE=2 SV=1
          Length = 1020

 Score = 30.8 bits (68), Expect = 2.2
 Identities = 27/80 (33%), Positives = 39/80 (48%), Gaps = 2/80 (2%)
 Frame = +1

Query: 37  KVRTGITATRAALKFIEGGLIASNTASNVKEAVAKAEKHGFKTHAQELTRLNEKIGVYNA 216
           K+R  +  ++AAL+FI+G  + S     V E V  A   GF+  A EL  + E       
Sbjct: 61  KLRVAVLVSKAALQFIQGLSLRSEYV--VPEEVKAA---GFQICADELGSIVEGHDSKKL 115

Query: 217 L--GRLQGIADKLQVPSLEG 270
           +  G + GIADKL     +G
Sbjct: 116 ITHGGVTGIADKLATSPADG 135


>sp|A8EZT5|DNLJ_RICCK DNA ligase OS=Rickettsia canadensis (strain
           McKiel) GN=ligA PE=3 SV=1
          Length = 689

 Score = 30.0 bits (66), Expect = 3.7
 Identities = 18/61 (29%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
 Frame = +1

Query: 10  RKTAMSAQRKVRTGITATRAALKFI-EGGLIASNTASNVKEAVAKAEKHGFKTHAQELTR 186
           R  A  + R++ + +TA R    F+  GG    N AS+  E + K ++ GF+ +  E+++
Sbjct: 206 RNAAAGSLRQLDSSVTAKRPLKYFVYSGGATEQNIASSQNELLKKLKEFGFRVN--EISK 263

Query: 187 L 189
           L
Sbjct: 264 L 264


>sp|P19401|M12_STRPY M protein, serotype 12 (Fragment)
           OS=Streptococcus pyogenes GN=emm12 PE=1 SV=1
          Length = 564

 Score = 29.6 bits (65), Expect = 4.9
 Identities = 17/59 (28%), Positives = 28/59 (47%)
 Frame = +1

Query: 34  RKVRTGITATRAALKFIEGGLIASNTASNVKEAVAKAEKHGFKTHAQELTRLNEKIGVY 210
           RK++TG  +   AL  +  GL+A  T      +   AEK   +   Q+  RL ++  +Y
Sbjct: 13  RKLKTGTASVAVALTVVGAGLVAGQTV-RADHSDLVAEKQRLEDLGQKFERLKQRSELY 70


>sp|Q12SM7|ASSY_SHEDO Argininosuccinate synthase OS=Shewanella
           denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013)
           GN=argG PE=3 SV=1
          Length = 407

 Score = 29.6 bits (65), Expect = 4.9
 Identities = 19/50 (38%), Positives = 25/50 (50%)
 Frame = +1

Query: 97  IASNTASNVKEAVAKAEKHGFKTHAQELTRLNEKIGVYNALGRLQGIADK 246
           +A   A +  E VA + KHG  TH  E     + +  YNAL +L  IA K
Sbjct: 216 VAPEDAPDEAEYVALSIKHGRVTHVNE-----QVLSPYNALMKLNDIASK 260


>sp|Q9C9A2|PP112_ARATH Pentatricopeptide repeat-containing protein
           At1g71060, mitochondrial OS=Arabidopsis thaliana
           GN=At1g71060 PE=2 SV=1
          Length = 510

 Score = 28.9 bits (63), Expect = 8.3
 Identities = 17/58 (29%), Positives = 28/58 (48%), Gaps = 3/58 (5%)
 Frame = +1

Query: 112 ASNVKEAVA---KAEKHGFKTHAQELTRLNEKIGVYNALGRLQGIADKLQVPSLEGGI 276
           A  VKEA+    K E+ GFK  + +  R+ + +     +G  Q + DK++    E  I
Sbjct: 175 ARKVKEAIGAFHKMEEFGFKMESSDFNRMLDTLSKSRNVGDAQKVFDKMKKKRFEPDI 232


>sp|Q9CR40|KLH28_MOUSE Kelch-like protein 28 OS=Mus musculus
           GN=Klhl28 PE=2 SV=1
          Length = 571

 Score = 28.9 bits (63), Expect = 8.3
 Identities = 16/56 (28%), Positives = 28/56 (50%), Gaps = 12/56 (21%)
 Frame = -2

Query: 201 NFFIQARKFLCMSFETMLFCFGNSFFDI------------ACSVACNKTTFYELQS 70
           + ++ A KF+C +FE++  C    FF++              +VA  +T FY L+S
Sbjct: 151 DLYLAATKFICQNFESV--CQTEEFFELTHADLDEIVSNDCLNVATEETVFYALES 204

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP916469|Adiantum capillus-veneris mRNA, clone:
YMU001_000088_A08.
         (280 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A7E678|A7E678_SCLS1 Putative uncharacterized protein OS=Scler...    40   0.059
tr|Q8G3X1|Q8G3X1_BIFLO D-Glucose-proton symporter OS=Bifidobacte...    35   1.4  
tr|P93067|P93067_BRAOL Calmodulin-stimulated calcium-ATPase OS=B...    35   1.9  
tr|B8EJ50|B8EJ50_METSI Formate dehydrogenase family accessory pr...    34   3.2  
tr|B1MC79|B1MC79_MYCA9 Putative uncharacterized protein OS=Mycob...    34   4.2  
tr|B6PKI8|B6PKI8_BRAFL Putative uncharacterized protein (Fragmen...    34   4.2  
tr|A2DC58|A2DC58_TRIVA Putative uncharacterized protein OS=Trich...    34   4.2  
tr|Q6TP30|Q6TP30_RHIET D-alanine-D-alanine ligase B (Fragment) O...    33   5.5  
tr|Q11PE5|Q11PE5_CYTH3 Cysteine desulfurase OS=Cytophaga hutchin...    33   7.2  
tr|A8KHX5|A8KHX5_YEREN Putative flagellar hook-associated protei...    33   7.2  
tr|A9RXM8|A9RXM8_PHYPA Predicted protein OS=Physcomitrella paten...    33   7.2  
tr|A6PN86|A6PN86_9BACT Chaperone protein DnaK OS=Victivallis vad...    33   9.4  

>tr|A7E678|A7E678_SCLS1 Putative uncharacterized protein
           OS=Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 /
           Ss-1) GN=SS1G_00803 PE=4 SV=1
          Length = 565

 Score = 40.0 bits (92), Expect = 0.059
 Identities = 21/55 (38%), Positives = 32/55 (58%)
 Frame = +1

Query: 37  KVRTGITATRAALKFIEGGLIASNTASNVKEAVAKAEKHGFKTHAQELTRLNEKI 201
           K++  + A+R  L+ ++GGL    + S  +E  A + KH   T  +ELTRL EKI
Sbjct: 163 KIQEELKASRDTLRMVQGGLEQERSRSVKREQEAFSAKHQLATVQEELTRLQEKI 217


>tr|Q8G3X1|Q8G3X1_BIFLO D-Glucose-proton symporter
           OS=Bifidobacterium longum GN=glcP PE=3 SV=1
          Length = 517

 Score = 35.4 bits (80), Expect = 1.4
 Identities = 23/57 (40%), Positives = 32/57 (56%), Gaps = 5/57 (8%)
 Frame = +1

Query: 10  RKTAMSAQRKVRTGITATRAALKFIEGGLI-----ASNTASNVKEAVAKAEKHGFKT 165
           ++TA +AQ    TG  AT  A++ IE G+      A+N A+N  E +  AE HGF T
Sbjct: 11  KQTASAAQETSATGAAAT--AIETIETGVAGVAGAATNAAANAIEDLEAAESHGFST 65


>tr|P93067|P93067_BRAOL Calmodulin-stimulated calcium-ATPase
           OS=Brassica oleracea PE=2 SV=1
          Length = 1025

 Score = 35.0 bits (79), Expect = 1.9
 Identities = 28/91 (30%), Positives = 38/91 (41%), Gaps = 2/91 (2%)
 Frame = +1

Query: 4   EKRKTAMSAQRKVRTGITATRAALKFIEGGLIASNTASNVKEAVAKAEKHGFKTHAQELT 183
           E  K     Q K+R      +AAL+FI+ G   +     + + V +A   GF   A EL 
Sbjct: 48  ENEKKRCQIQEKIRVAFYVQKAALQFIDAG---TRREYKLTDEVRQA---GFHVEADELA 101

Query: 184 RL--NEKIGVYNALGRLQGIADKLQVPSLEG 270
            +  N         G  +GIA KL V   EG
Sbjct: 102 SMVRNHDTRSLTKSGGAEGIAQKLSVSLTEG 132


>tr|B8EJ50|B8EJ50_METSI Formate dehydrogenase family accessory
           protein FdhD OS=Methylocella silvestris BL2 GN=Msil_3657
           PE=4 SV=1
          Length = 285

 Score = 34.3 bits (77), Expect = 3.2
 Identities = 27/90 (30%), Positives = 41/90 (45%)
 Frame = +1

Query: 1   VEKRKTAMSAQRKVRTGITATRAALKFIEGGLIASNTASNVKEAVAKAEKHGFKTHAQEL 180
           +E  + AM A  +V + ++  R  +      L A    +    AV  A   GF T A+ L
Sbjct: 127 IESLEQAMRAAPRVSSALSFDRRDVTEAIASLAAGQLLNEKTHAVHAA---GFWTPARGL 183

Query: 181 TRLNEKIGVYNALGRLQGIADKLQVPSLEG 270
               E +G +NAL +L G   +  VP+ EG
Sbjct: 184 VAAREDVGRHNALDKLAGALLREGVPAGEG 213


>tr|B1MC79|B1MC79_MYCA9 Putative uncharacterized protein
           OS=Mycobacterium abscessus (strain ATCC 19977 / DSM
           44196) GN=MAB_2771c PE=4 SV=1
          Length = 249

 Score = 33.9 bits (76), Expect = 4.2
 Identities = 23/52 (44%), Positives = 29/52 (55%)
 Frame = +1

Query: 40  VRTGITATRAALKFIEGGLIASNTASNVKEAVAKAEKHGFKTHAQELTRLNE 195
           V T  TA RAA    +GG +A+  AS V EA     K G +T +Q L RL+E
Sbjct: 133 VITEFTAARAASPITQGGSVATTIASAVAEASELGNKMG-RTLSQLLDRLDE 183


>tr|B6PKI8|B6PKI8_BRAFL Putative uncharacterized protein (Fragment)
           OS=Branchiostoma floridae GN=BRAFLDRAFT_252111 PE=4 SV=1
          Length = 137

 Score = 33.9 bits (76), Expect = 4.2
 Identities = 22/64 (34%), Positives = 29/64 (45%), Gaps = 9/64 (14%)
 Frame = -2

Query: 171 CMSFETMLFCFGNSFFDI----ACSVACNKTTFYELQSSPCCR-----DASPDLPLCRHR 19
           C     +L C G     I    ACSVAC KTT+     + CC+       + D+P CR  
Sbjct: 29  CCKAIRLLACCGGCCKTIWPGGACSVACCKTTWLGACCAACCKAIPLVTCTLDIPCCRAC 88

Query: 18  CFAL 7
           C A+
Sbjct: 89  CKAI 92


>tr|A2DC58|A2DC58_TRIVA Putative uncharacterized protein
            OS=Trichomonas vaginalis G3 GN=TVAG_457340 PE=4 SV=1
          Length = 3355

 Score = 33.9 bits (76), Expect = 4.2
 Identities = 14/49 (28%), Positives = 28/49 (57%)
 Frame = -2

Query: 213  IINSNFFIQARKFLCMSFETMLFCFGNSFFDIACSVACNKTTFYELQSS 67
            +++ NF  + +K +C+S  ++       +FDI+C + CNK  F ++  S
Sbjct: 2704 VVDCNFLSKTKKNICVSNFSVKDLHKTEWFDISCVLCCNKKLFDDIIQS 2752


>tr|Q6TP30|Q6TP30_RHIET D-alanine-D-alanine ligase B (Fragment)
           OS=Rhizobium etli GN=ddlB PE=4 SV=1
          Length = 136

 Score = 33.5 bits (75), Expect = 5.5
 Identities = 30/113 (26%), Positives = 50/113 (44%), Gaps = 23/113 (20%)
 Frame = +1

Query: 7   KRKTAMSAQRKVR-------TGITATRAALKFIEGGLIASN--TASNVKEAVAKAEKHGF 159
           K +T  +A RK R        G+  +R  +  + GG  +    + S+ K      E  GF
Sbjct: 3   KARTTQTASRKRRFQKWKLFLGVLMSRKHVAVLMGGFSSERPVSLSSGKACAEALEAEGF 62

Query: 160 KTHAQELTR-LNEKIG------VYNAL-------GRLQGIADKLQVPSLEGGI 276
           K    ++ R ++EK+       V+NAL       G +QGI + L++P    G+
Sbjct: 63  KVTTLDVARDVSEKLAALKPDVVFNALHGPFGEDGTIQGILEYLEIPYTHSGV 115


>tr|Q11PE5|Q11PE5_CYTH3 Cysteine desulfurase OS=Cytophaga
           hutchinsonii (strain ATCC 33406 / NCIMB 9469) GN=iscS
           PE=3 SV=1
          Length = 375

 Score = 33.1 bits (74), Expect = 7.2
 Identities = 23/94 (24%), Positives = 37/94 (39%), Gaps = 7/94 (7%)
 Frame = +1

Query: 4   EKRKTAMSAQRKVRTGITATRAALKFIEGGLIASNTA-------SNVKEAVAKAEKHGFK 162
           E R     A++K+   +  T A + F  GG  A NTA        N+K  +    +H   
Sbjct: 41  ETRSAIEIARKKIADLLNTTAAEIFFTSGGTEADNTAIIGAVEKHNIKHIITSRLEHHAV 100

Query: 163 THAQELTRLNEKIGVYNALGRLQGIADKLQVPSL 264
            H  +      ++ VY      +G+ D   + SL
Sbjct: 101 LHTAQYLEKLHRVSVYYVDVNEKGVIDLAHLESL 134


>tr|A8KHX5|A8KHX5_YEREN Putative flagellar hook-associated protein
           OS=Yersinia enterocolitica (type O:9) PE=4 SV=1
          Length = 422

 Score = 33.1 bits (74), Expect = 7.2
 Identities = 22/72 (30%), Positives = 40/72 (55%), Gaps = 8/72 (11%)
 Frame = +1

Query: 4   EKRKTAMSAQRKVRTGITATRAALK---FIEGGLIASNTASNVKE-----AVAKAEKHGF 159
           ++ KT  +A  K ++G+TA R ALK    +E GL+ + T++++KE     A  KA K  +
Sbjct: 29  QQLKTQQAALDKQKSGLTAFRTALKDLGKVEEGLLKNKTSTSIKEVATVSANEKALKGNY 88

Query: 160 KTHAQELTRLNE 195
               ++L   ++
Sbjct: 89  SFFVEQLASAHQ 100