BP916471
Clone id YMU001_000088_A10
Library
Length 561
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000088_A10.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
GGAAGAATTCGGGCCGTCGCACATCAGGTTTTTGACTCGAAGTTCAATTCGCAGATAGAC
ATCAAGAATTAGTCCAACTGTTTACAGTCCTACTGCTAGTAGTCACTCTTTCATTGAGGT
GAAACTAGGTAGCTAGTTGGTGTGGTTCTCTCGAGCTCTAGTTGACAACCCAGAAGTGAG
CCAATGGTCGAAGATCTTTGTTATTTATCTTTCTAACTATTTCTCTCCAAGATGATAGTT
TACCTCTTGTTTTAGAAAGCCAAAGAGACCAATGTGTTACTGAGTTTTGAAAATATATGG
TCATCTCTCCTCGCTCCAATGCCTCCATTGCTCTCATACATTTATGTACTAGCTCACCCG
TTGTGCCACCTAGCCTCAAGTTGGACCACTGAGGGGCTAGCAATTTGTAGTGTCCCTCTA
TCTCTTTCCACTAGCCACCTTGAGGGAAGAGTTTAGGCTTGAACATCACGTCCTTTACAA
TAATCATCCATGCTTGGTCCTACTTCGCGATTAAGACCACCAAATTGGCACTGGGCATTT
GGATGGATGGTAAGTTTAGAT
■■Homology search results ■■ -
sp_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP916471|Adiantum capillus-veneris mRNA, clone:
YMU001_000088_A10.
(561 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done

***** No hits found ******


tr_hit_id Q89ZU3
Definition tr|Q89ZU3|Q89ZU3_BACTN Glycoside transferase family 2 OS=Bacteroides thetaiotaomicron
Align length 28
Score (bit) 33.5
E-value 8.1
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP916471|Adiantum capillus-veneris mRNA, clone:
YMU001_000088_A10.
(561 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q89ZU3|Q89ZU3_BACTN Glycoside transferase family 2 OS=Bactero... 33 8.1

>tr|Q89ZU3|Q89ZU3_BACTN Glycoside transferase family 2
OS=Bacteroides thetaiotaomicron GN=BT_4281 PE=4 SV=1
Length = 277

Score = 33.5 bits (75), Expect = 8.1
Identities = 11/28 (39%), Positives = 19/28 (67%)
Frame = +2

Query: 413 SLYLFPLATLREEFRLEHHVLYNNHPCL 496
++ L P +++EF L HH+ Y N+PC+
Sbjct: 147 NMLLHPSVMIKKEFLLNHHIEYQNYPCV 174