NBDC - アーカイブトップ - ヘルプ
データベースの説明 | データ項目の説明 | ダウンロード | 利用許諾 | ヘルプ
AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
Description of this DB | Description of data items | Download | License
AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP916481
Clone id YMU001_000088_B08
Library
Length 469
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000088_B08.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
CAATCCCAAATTCCGAATGTGCTCAAGCTTAGAAGGACACTTACACAACCTCCGTCCGTT
TACTAACGATTGAAATGCTTCTCGTCTATTAGAGTTTCTCTGGCAGGTGGAGGTCTGCTC
TCCACGTATGGCTGCTTCAGCAACTGCATCTTCTTCGTCCCTGGTCTTTCATCGCCTGCC
CAACTTAAGATTGAAAGGCCCTTGCTACGGAAACTGGCAACCCGTTTGGAAGCTTGGTTG
GACTCCGTGCACAAAATGTTTGTATAGGCTGGTGGATGTGAGGGCCAGGTCAGCATCCAC
AGCTGCATCCTCTTCTGAAAGGTTCAGTCCCAAATACAGAGAAGATAGGCTTAAGAAGTT
ATCTGAGCTCGTTGAGGAGGTTGTCCGCACAGCTGTGGATACAGGTCCTCGGGGAGCCAT
TCGTTTTGCACAAGGCATTGAAGCAGTTGTTAATGTTGGCGGAAAACGA
■■Homology search results ■■ -
sp_hit_id Q9ASX5
Definition sp|Q9ASX5|Y5520_ARATH Uncharacterized aarF domain-containing protein kinase At5g05200, chloroplastic OS=Arabidopsis thaliana
Align length 42
Score (bit) 51.2
E-value 2.0e-06
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP916481|Adiantum capillus-veneris mRNA, clone:
YMU001_000088_B08.
         (469 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9ASX5|Y5520_ARATH Uncharacterized aarF domain-containing pro...    51   2e-06
sp|Q23989|QUAI_DROME Villin-like protein quail OS=Drosophila mel...    31   3.1  
sp|Q8IUX4|ABC3F_HUMAN DNA dC->dU-editing enzyme APOBEC-3F OS=Hom...    30   4.1  
sp|Q9UH17|ABC3B_HUMAN Probable DNA dC->dU-editing enzyme APOBEC-...    30   4.1  
sp|Q28019|LTBP2_BOVIN Latent-transforming growth factor beta-bin...    30   5.3  
sp|Q6EMK4|VASN_HUMAN Vasorin OS=Homo sapiens GN=VASN PE=1 SV=1         30   6.9  
sp|P09208|INSR_DROME Insulin-like receptor OS=Drosophila melanog...    29   9.1  

>sp|Q9ASX5|Y5520_ARATH Uncharacterized aarF domain-containing
           protein kinase At5g05200, chloroplastic OS=Arabidopsis
           thaliana GN=At5g05200 PE=1 SV=1
          Length = 540

 Score = 51.2 bits (121), Expect = 2e-06
 Identities = 20/42 (47%), Positives = 34/42 (80%)
 Frame = +2

Query: 341 EDRLKKLSELVEEVVRTAVDTGPRGAIRFAQGIEAVVNVGGK 466
           + +++KL +LVE++V+T+++TGPRG  R  QG++A V VGG+
Sbjct: 59  QSQIEKLPKLVEDIVQTSINTGPRGVTRLVQGVQAFVGVGGE 100


>sp|Q23989|QUAI_DROME Villin-like protein quail OS=Drosophila
           melanogaster GN=qua PE=2 SV=2
          Length = 888

 Score = 30.8 bits (68), Expect = 3.1
 Identities = 15/66 (22%), Positives = 26/66 (39%)
 Frame = -3

Query: 308 MQLWMLTWPSHPPAYTNILCTESNQASKRVASFRSKGLSILSWAGDERPGTKKMQLLKQP 129
           +QL+++ W      Y  IL  +    S         G     W G + P  ++   + Q 
Sbjct: 686 VQLFLVWWQQSSLRYEEILGFDQQDLSSDCTYILDTGSLTYVWLGSQAPNQERYTAIAQS 745

Query: 128 YVESRP 111
           YV++ P
Sbjct: 746 YVQNAP 751


>sp|Q8IUX4|ABC3F_HUMAN DNA dC->dU-editing enzyme APOBEC-3F OS=Homo
           sapiens GN=APOBEC3F PE=1 SV=3
          Length = 373

 Score = 30.4 bits (67), Expect = 4.1
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = +2

Query: 200 PCYGNWQPVWKLGWTPCTKCLYRLVD 277
           P Y  +Q  W + WTPC  C+ +L +
Sbjct: 80  PAYKCFQITWFVSWTPCPDCVAKLAE 105


>sp|Q9UH17|ABC3B_HUMAN Probable DNA dC->dU-editing enzyme APOBEC-3B
           OS=Homo sapiens GN=APOBEC3B PE=1 SV=1
          Length = 382

 Score = 30.4 bits (67), Expect = 4.1
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = +2

Query: 200 PCYGNWQPVWKLGWTPCTKCLYRLVD 277
           P Y  +Q  W + WTPC  C+ +L +
Sbjct: 81  PAYKCFQITWFVSWTPCPDCVAKLAE 106


>sp|Q28019|LTBP2_BOVIN Latent-transforming growth factor beta-binding
            protein 2 OS=Bos taurus GN=LTBP2 PE=2 SV=2
          Length = 1842

 Score = 30.0 bits (66), Expect = 5.3
 Identities = 20/63 (31%), Positives = 28/63 (44%), Gaps = 2/63 (3%)
 Frame = -1

Query: 457  NINNCFNALCKTNGSPRTCIHSCADNLLNELR*LLKPIFSVFGTE--PFRRGCSCGC*PG 284
            N +  FN +C+T   P      C D  ++E   L +PI   +  E  P    C  GC PG
Sbjct: 1227 NTDGSFNCVCETGFQPSPESGECVD--IDECEDLGEPICGAWRCENSPGSYRCVLGCQPG 1284

Query: 283  PHI 275
             H+
Sbjct: 1285 FHM 1287


>sp|Q6EMK4|VASN_HUMAN Vasorin OS=Homo sapiens GN=VASN PE=1 SV=1
          Length = 673

 Score = 29.6 bits (65), Expect = 6.9
 Identities = 21/68 (30%), Positives = 27/68 (39%), Gaps = 1/68 (1%)
 Frame = -1

Query: 358 LLKPIFSVFGTEPFRRGCSCGC*PGPHIHQPIQTFC-ARSPTKLPNGLPVSVARAFQS*V 182
           LL P+  +    P  +GC  GC       QP   FC AR  T +P  +P      +    
Sbjct: 7   LLLPLLLLLALGPGVQGCPSGC----QCSQPQTVFCTARQGTTVPRDVPPDTVGLYVFEN 62

Query: 181 GQAMKDQG 158
           G  M D G
Sbjct: 63  GITMLDAG 70


>sp|P09208|INSR_DROME Insulin-like receptor OS=Drosophila
           melanogaster GN=InR PE=1 SV=3
          Length = 2144

 Score = 29.3 bits (64), Expect = 9.1
 Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
 Frame = -2

Query: 153 EDAVAEAAIRGEQTSTCQRNSNRREAFQSLVNGRRLC--KCPSK 28
           E+     AI GE  ++CQ ++NRR  + S     +LC  KCP K
Sbjct: 496 EEGHDTTAIEGELNASCQLHNNRRLCWNS-----KLCQTKCPEK 534
tr_hit_id A5AL61
Definition tr|A5AL61|A5AL61_VITVI Putative uncharacterized protein OS=Vitis vinifera
Align length 42
Score (bit) 58.5
E-value 2.0e-07
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP916481|Adiantum capillus-veneris mRNA, clone:
YMU001_000088_B08.
         (469 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A5AL61|A5AL61_VITVI Putative uncharacterized protein OS=Vitis...    59   2e-07
tr|A7Q3Y9|A7Q3Y9_VITVI Chromosome chr13 scaffold_48, whole genom...    56   8e-07
tr|Q8H2L4|Q8H2L4_ORYSJ ABC1 family protein kinase-like protein O...    56   1e-06
tr|Q0D7P0|Q0D7P0_ORYSJ Os07g0227800 protein OS=Oryza sativa subs...    56   1e-06
tr|B8B8H5|B8B8H5_ORYSI Putative uncharacterized protein OS=Oryza...    56   1e-06
tr|A3BHY6|A3BHY6_ORYSJ Putative uncharacterized protein OS=Oryza...    56   1e-06
tr|B6TN02|B6TN02_MAIZE Ubiquinone biosynthesis protein ubiB OS=Z...    53   7e-06
tr|A9RU69|A9RU69_PHYPA Predicted protein (Fragment) OS=Physcomit...    52   1e-05
tr|A8J7T9|A8J7T9_CHLRE ABC1/COQ8 ser/thr kinase (Fragment) OS=Ch...    37   0.38 
tr|B6KFE0|B6KFE0_TOXGO Putative uncharacterized protein OS=Toxop...    35   1.4  
tr|A3APW3|A3APW3_ORYSJ Putative uncharacterized protein OS=Oryza...    33   9.4  

>tr|A5AL61|A5AL61_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_017535 PE=4 SV=1
          Length = 517

 Score = 58.5 bits (140), Expect = 2e-07
 Identities = 24/42 (57%), Positives = 38/42 (90%)
 Frame = +2

Query: 341 EDRLKKLSELVEEVVRTAVDTGPRGAIRFAQGIEAVVNVGGK 466
           +DR++ L +LVE++V+T+++TGPRGA+R AQGI+AV+ VGG+
Sbjct: 40  QDRIENLPKLVEDIVQTSINTGPRGALRAAQGIQAVIRVGGE 81


>tr|A7Q3Y9|A7Q3Y9_VITVI Chromosome chr13 scaffold_48, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00029473001
           PE=4 SV=1
          Length = 436

 Score = 56.2 bits (134), Expect = 8e-07
 Identities = 23/42 (54%), Positives = 37/42 (88%)
 Frame = +2

Query: 341 EDRLKKLSELVEEVVRTAVDTGPRGAIRFAQGIEAVVNVGGK 466
           +D ++ L +LVE++V+T+++TGPRGA+R AQGI+AV+ VGG+
Sbjct: 44  QDSIENLPKLVEDIVQTSINTGPRGALRAAQGIQAVIRVGGE 85


>tr|Q8H2L4|Q8H2L4_ORYSJ ABC1 family protein kinase-like protein
           OS=Oryza sativa subsp. japonica GN=OSJNBa0016A21.106
           PE=4 SV=1
          Length = 565

 Score = 55.8 bits (133), Expect = 1e-06
 Identities = 24/42 (57%), Positives = 36/42 (85%)
 Frame = +2

Query: 341 EDRLKKLSELVEEVVRTAVDTGPRGAIRFAQGIEAVVNVGGK 466
           +DR  +L +LVE++++T++ TGPRGA RFAQGI+AV+ VGG+
Sbjct: 80  QDRAGELPKLVEDLLQTSISTGPRGAFRFAQGIQAVLGVGGE 121


>tr|Q0D7P0|Q0D7P0_ORYSJ Os07g0227800 protein OS=Oryza sativa subsp.
           japonica GN=Os07g0227800 PE=4 SV=1
          Length = 558

 Score = 55.8 bits (133), Expect = 1e-06
 Identities = 24/42 (57%), Positives = 36/42 (85%)
 Frame = +2

Query: 341 EDRLKKLSELVEEVVRTAVDTGPRGAIRFAQGIEAVVNVGGK 466
           +DR  +L +LVE++++T++ TGPRGA RFAQGI+AV+ VGG+
Sbjct: 80  QDRAGELPKLVEDLLQTSISTGPRGAFRFAQGIQAVLGVGGE 121


>tr|B8B8H5|B8B8H5_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_25421 PE=4 SV=1
          Length = 558

 Score = 55.8 bits (133), Expect = 1e-06
 Identities = 24/42 (57%), Positives = 36/42 (85%)
 Frame = +2

Query: 341 EDRLKKLSELVEEVVRTAVDTGPRGAIRFAQGIEAVVNVGGK 466
           +DR  +L +LVE++++T++ TGPRGA RFAQGI+AV+ VGG+
Sbjct: 80  QDRAGELPKLVEDLLQTSISTGPRGAFRFAQGIQAVLGVGGE 121


>tr|A3BHY6|A3BHY6_ORYSJ Putative uncharacterized protein OS=Oryza
           sativa subsp. japonica GN=OsJ_022658 PE=4 SV=1
          Length = 552

 Score = 55.8 bits (133), Expect = 1e-06
 Identities = 24/44 (54%), Positives = 36/44 (81%)
 Frame = +2

Query: 335 YREDRLKKLSELVEEVVRTAVDTGPRGAIRFAQGIEAVVNVGGK 466
           +  DR  +L +LVE++++T++ TGPRGA RFAQGI+AV+ VGG+
Sbjct: 65  FSRDRAGELPKLVEDLLQTSISTGPRGAFRFAQGIQAVLGVGGE 108


>tr|B6TN02|B6TN02_MAIZE Ubiquinone biosynthesis protein ubiB OS=Zea
           mays PE=2 SV=1
          Length = 551

 Score = 53.1 bits (126), Expect = 7e-06
 Identities = 23/42 (54%), Positives = 34/42 (80%)
 Frame = +2

Query: 341 EDRLKKLSELVEEVVRTAVDTGPRGAIRFAQGIEAVVNVGGK 466
           +DR  +L +LVE++ +T++ TGPRGA R AQGI+AV+ VGG+
Sbjct: 71  QDRAGELPKLVEDLTQTSISTGPRGAFRMAQGIQAVLGVGGE 112


>tr|A9RU69|A9RU69_PHYPA Predicted protein (Fragment)
           OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_119475 PE=4 SV=1
          Length = 483

 Score = 52.0 bits (123), Expect = 1e-05
 Identities = 23/41 (56%), Positives = 33/41 (80%)
 Frame = +2

Query: 344 DRLKKLSELVEEVVRTAVDTGPRGAIRFAQGIEAVVNVGGK 466
           +R+K+ ++L+ +V + AV TGPRGA+R AQGIEA V VGG+
Sbjct: 1   ERVKEFNKLLGDVAKIAVSTGPRGAVRLAQGIEAFVTVGGE 41


>tr|A8J7T9|A8J7T9_CHLRE ABC1/COQ8 ser/thr kinase (Fragment)
           OS=Chlamydomonas reinhardtii GN=AKC1 PE=4 SV=1
          Length = 331

 Score = 37.4 bits (85), Expect = 0.38
 Identities = 16/42 (38%), Positives = 25/42 (59%)
 Frame = +2

Query: 341 EDRLKKLSELVEEVVRTAVDTGPRGAIRFAQGIEAVVNVGGK 466
           + R ++L ELV+E +R  V TGPRG  R  Q  ++V  +  +
Sbjct: 23  QQRTEQLRELVQETIRITVSTGPRGIFRAMQAAQSVAGLAAE 64


>tr|B6KFE0|B6KFE0_TOXGO Putative uncharacterized protein
           OS=Toxoplasma gondii ME49 GN=TGME49_040520 PE=4 SV=1
          Length = 399

 Score = 35.4 bits (80), Expect = 1.4
 Identities = 13/56 (23%), Positives = 29/56 (51%)
 Frame = -3

Query: 275 PPAYTNILCTESNQASKRVASFRSKGLSILSWAGDERPGTKKMQLLKQPYVESRPP 108
           PP +T +   + ++A   +A ++  G+  + W  D +P  ++ QL++    E+  P
Sbjct: 195 PPLFTAVRAGDKHKAQSIIALWKKPGVQRMGWVDDRQPSGREQQLIRDSTNEANEP 250