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NBDC - LSDB Archive
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BP916490
Clone id YMU001_000088_C05
Library
Length 481
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000088_C05.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
CTGGGGGAGGTGGCTCAGAGTCGGTCAAAGTTAAGCAGTGTGACGAAAATTGTAATGAGA
CCTGCGATAATGCCAGAATCTACATATCAGGGCTTCCTCTTGATACAACAACTGATGAAC
TTAGAGAGCTGTTTGGGGGCATTGGTCAGATAGCTGCACCAGCTTCTGGATAAGGCAAGT
GTAGGTGATTCAGGAGTTTGGCATGTTGTCTTTATTTGCCTGTATGCGTTCGCCCAATGC
TGATGATGCTACGGTTTGTTCTCAGAAGTGTGGATTGTTCATCCCTATGTAGGTTGCAAG
GATTAAGCAAAAACGAGGTTACAAAGATCAGTGGCCATGGAACATCAAACTGTACACTGA
TAATGCTGGCCAAAACAAGGGAGATGGAGTGTTGGTCTATGAAGATCCATCTGCAGCACA
TTCTGCTGGAGGGTTCTTTAATGATCATGTCTTGAGGGGTCATCAGATAAAGGTTATCAT
G
■■Homology search results ■■ -
sp_hit_id O43120
Definition sp|O43120|UAP2_SCHPO Splicing factor U2AF-associated protein 2 OS=Schizosaccharomyces pombe
Align length 29
Score (bit) 36.2
E-value 0.079
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP916490|Adiantum capillus-veneris mRNA, clone:
YMU001_000088_C05.
         (481 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|O43120|UAP2_SCHPO Splicing factor U2AF-associated protein 2 O...    36   0.079
sp|Q18409|RSP6_CAEEL Probable splicing factor, arginine/serine-r...    34   0.30 
sp|Q92804|RBP56_HUMAN TATA-binding protein-associated factor 2N ...    33   0.68 
sp|Q5RB63|HTSF1_PONAB HIV Tat-specific factor 1 homolog OS=Pongo...    33   0.68 
sp|O43719|HTSF1_HUMAN HIV Tat-specific factor 1 OS=Homo sapiens ...    33   0.68 
sp|Q61545|EWS_MOUSE RNA-binding protein EWS OS=Mus musculus GN=E...    33   0.68 
sp|Q01844|EWS_HUMAN RNA-binding protein EWS OS=Homo sapiens GN=E...    33   0.68 
sp|P56959|FUS_MOUSE RNA-binding protein FUS OS=Mus musculus GN=F...    33   0.89 
sp|P35637|FUS_HUMAN RNA-binding protein FUS OS=Homo sapiens GN=F...    33   0.89 
sp|Q28009|FUS_BOVIN RNA-binding protein FUS OS=Bos taurus GN=FUS...    33   0.89 
sp|P53830|YN26_YEAST Uncharacterized RNA-binding protein YNL286W...    32   1.1  
sp|Q99383|HRP1_YEAST Nuclear polyadenylated RNA-binding protein ...    32   1.9  
sp|Q9JJ54|HNRPD_RAT Heterogeneous nuclear ribonucleoprotein D0 O...    32   1.9  
sp|Q60668|HNRPD_MOUSE Heterogeneous nuclear ribonucleoprotein D0...    32   1.9  
sp|Q14103|HNRPD_HUMAN Heterogeneous nuclear ribonucleoprotein D0...    32   1.9  
sp|P17132|HNRPC_RAT Heterogeneous nuclear ribonucleoprotein C (F...    32   1.9  
sp|Q15717|ELAV1_HUMAN ELAV-like protein 1 OS=Homo sapiens GN=ELA...    32   1.9  
sp|Q8BGC0|HTSF1_MOUSE HIV Tat-specific factor 1 homolog OS=Mus m...    32   2.0  
sp|Q27294|CAZ_DROME RNA-binding protein cabeza OS=Drosophila mel...    32   2.0  
sp|P19684|ROC5_NICSY 33 kDa ribonucleoprotein, chloroplastic OS=...    31   2.5  
sp|Q08473|SQD_DROME RNA-binding protein squid OS=Drosophila mela...    31   3.3  
sp|Q04047|NONA_DROME Protein no-on-transient A OS=Drosophila mel...    30   4.3  
sp|Q9U1N0|HRP65_CHITE Hrp65 protein OS=Chironomus tentans GN=HRP...    30   4.3  
sp|Q640A2|HNRDL_XENTR Heterogeneous nuclear ribonucleoprotein D-...    30   4.3  
sp|Q6NU14|HNDLB_XENLA Heterogeneous nuclear ribonucleoprotein D-...    30   4.3  
sp|Q7ZX83|HNDLA_XENLA Heterogeneous nuclear ribonucleoprotein D-...    30   4.3  
sp|P70372|ELAV1_MOUSE ELAV-like protein 1 OS=Mus musculus GN=Ela...    30   4.3  
sp|O17310|SXL_MUSDO Sex-lethal homolog OS=Musca domestica GN=SXL...    30   5.6  
sp|O97018|SXL_CHRRU Sex-lethal homolog OS=Chrysomya rufifacies G...    30   5.6  
sp|O64380|PABP3_ARATH Polyadenylate-binding protein 3 OS=Arabido...    30   5.6  

>sp|O43120|UAP2_SCHPO Splicing factor U2AF-associated protein 2
           OS=Schizosaccharomyces pombe GN=uap2 PE=1 SV=1
          Length = 367

 Score = 36.2 bits (82), Expect = 0.079
 Identities = 16/29 (55%), Positives = 19/29 (65%)
 Frame = +3

Query: 69  NARIYISGLPLDTTTDELRELFGGIGQIA 155
           N  +YI GLPLD T DE+ E+F   G IA
Sbjct: 109 NKAVYIQGLPLDVTVDEIEEVFKKCGVIA 137


>sp|Q18409|RSP6_CAEEL Probable splicing factor, arginine/serine-rich
           6 OS=Caenorhabditis elegans GN=rsp-6 PE=1 SV=1
          Length = 179

 Score = 34.3 bits (77), Expect = 0.30
 Identities = 13/28 (46%), Positives = 20/28 (71%)
 Frame = +3

Query: 69  NARIYISGLPLDTTTDELRELFGGIGQI 152
           +A++Y+ GLP D T+ EL E+F   G+I
Sbjct: 2   DAKVYVGGLPSDATSQELEEIFDRFGRI 29


>sp|Q92804|RBP56_HUMAN TATA-binding protein-associated factor 2N
           OS=Homo sapiens GN=TAF15 PE=1 SV=1
          Length = 592

 Score = 33.1 bits (74), Expect = 0.68
 Identities = 17/45 (37%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
 Frame = +2

Query: 344 IKLYTD-NAGQNKGDGVLVYEDPSAAHSAGGFFNDHVLRGHQIKV 475
           I LYTD + G+ KG+  + ++DP +A +A  +F+     G+ IKV
Sbjct: 271 INLYTDKDTGKPKGEATVSFDDPPSAKAAIDWFDGKEFHGNIIKV 315


>sp|Q5RB63|HTSF1_PONAB HIV Tat-specific factor 1 homolog OS=Pongo
           abelii GN=HTATSF1 PE=2 SV=1
          Length = 754

 Score = 33.1 bits (74), Expect = 0.68
 Identities = 15/46 (32%), Positives = 25/46 (54%)
 Frame = +2

Query: 338 WNIKLYTDNAGQNKGDGVLVYEDPSAAHSAGGFFNDHVLRGHQIKV 475
           + +KLY DN G  KGDG+  Y    +   A    ++  +RG+++ V
Sbjct: 168 FKVKLYKDNQGNLKGDGLCCYLKRESVELALKLLDEDEIRGYKLHV 213



 Score = 30.0 bits (66), Expect = 5.6
 Identities = 13/28 (46%), Positives = 16/28 (57%)
 Frame = +3

Query: 69  NARIYISGLPLDTTTDELRELFGGIGQI 152
           N  +Y+SGLP D T DE  +L    G I
Sbjct: 132 NTNVYVSGLPPDITVDEFIQLMSKFGII 159


>sp|O43719|HTSF1_HUMAN HIV Tat-specific factor 1 OS=Homo sapiens
           GN=HTATSF1 PE=1 SV=1
          Length = 755

 Score = 33.1 bits (74), Expect = 0.68
 Identities = 15/46 (32%), Positives = 25/46 (54%)
 Frame = +2

Query: 338 WNIKLYTDNAGQNKGDGVLVYEDPSAAHSAGGFFNDHVLRGHQIKV 475
           + +KLY DN G  KGDG+  Y    +   A    ++  +RG+++ V
Sbjct: 168 FKVKLYKDNQGNLKGDGLCCYLKRESVELALKLLDEDEIRGYKLHV 213



 Score = 30.0 bits (66), Expect = 5.6
 Identities = 13/28 (46%), Positives = 16/28 (57%)
 Frame = +3

Query: 69  NARIYISGLPLDTTTDELRELFGGIGQI 152
           N  +Y+SGLP D T DE  +L    G I
Sbjct: 132 NTNVYVSGLPPDITVDEFIQLMSKFGII 159


>sp|Q61545|EWS_MOUSE RNA-binding protein EWS OS=Mus musculus
           GN=Ewsr1 PE=1 SV=1
          Length = 655

 Score = 33.1 bits (74), Expect = 0.68
 Identities = 17/45 (37%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
 Frame = +2

Query: 344 IKLYTDN-AGQNKGDGVLVYEDPSAAHSAGGFFNDHVLRGHQIKV 475
           I +Y D   G+ KGD  + YEDP  A +A  +F+    +G ++KV
Sbjct: 397 IHIYLDKETGKPKGDATVSYEDPPTAKAAVEWFDGKDFQGSKLKV 441


>sp|Q01844|EWS_HUMAN RNA-binding protein EWS OS=Homo sapiens
           GN=EWSR1 PE=1 SV=1
          Length = 656

 Score = 33.1 bits (74), Expect = 0.68
 Identities = 17/45 (37%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
 Frame = +2

Query: 344 IKLYTDN-AGQNKGDGVLVYEDPSAAHSAGGFFNDHVLRGHQIKV 475
           I +Y D   G+ KGD  + YEDP  A +A  +F+    +G ++KV
Sbjct: 398 IHIYLDKETGKPKGDATVSYEDPPTAKAAVEWFDGKDFQGSKLKV 442


>sp|P56959|FUS_MOUSE RNA-binding protein FUS OS=Mus musculus GN=Fus
           PE=2 SV=1
          Length = 518

 Score = 32.7 bits (73), Expect = 0.89
 Identities = 17/45 (37%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
 Frame = +2

Query: 344 IKLYTDN-AGQNKGDGVLVYEDPSAAHSAGGFFNDHVLRGHQIKV 475
           I LYTD   G+ KG+  + ++DP +A +A  +F+     G+ IKV
Sbjct: 315 INLYTDRETGKLKGEATVSFDDPPSAKAAIDWFDGKEFSGNPIKV 359


>sp|P35637|FUS_HUMAN RNA-binding protein FUS OS=Homo sapiens GN=FUS
           PE=1 SV=1
          Length = 526

 Score = 32.7 bits (73), Expect = 0.89
 Identities = 17/45 (37%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
 Frame = +2

Query: 344 IKLYTDN-AGQNKGDGVLVYEDPSAAHSAGGFFNDHVLRGHQIKV 475
           I LYTD   G+ KG+  + ++DP +A +A  +F+     G+ IKV
Sbjct: 322 INLYTDRETGKLKGEATVSFDDPPSAKAAIDWFDGKEFSGNPIKV 366


>sp|Q28009|FUS_BOVIN RNA-binding protein FUS OS=Bos taurus GN=FUS
           PE=1 SV=2
          Length = 513

 Score = 32.7 bits (73), Expect = 0.89
 Identities = 17/45 (37%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
 Frame = +2

Query: 344 IKLYTDN-AGQNKGDGVLVYEDPSAAHSAGGFFNDHVLRGHQIKV 475
           I LYTD   G+ KG+  + ++DP +A +A  +F+     G+ IKV
Sbjct: 309 INLYTDRETGKLKGEATVSFDDPPSAKAAIDWFDGKEFSGNPIKV 353
tr_hit_id A9U3C2
Definition tr|A9U3C2|A9U3C2_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens
Align length 63
Score (bit) 110.0
E-value 3.0e-23
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP916490|Adiantum capillus-veneris mRNA, clone:
YMU001_000088_C05.
         (481 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9U3C2|A9U3C2_PHYPA Predicted protein OS=Physcomitrella paten...   110   3e-23
tr|A9T0V1|A9T0V1_PHYPA Predicted protein OS=Physcomitrella paten...   110   5e-23
tr|Q0JQG3|Q0JQG3_ORYSJ Os01g0164400 protein (Fragment) OS=Oryza ...   108   1e-22
tr|B8ADF0|B8ADF0_ORYSI Putative uncharacterized protein OS=Oryza...   108   1e-22
tr|A2ZPL7|A2ZPL7_ORYSJ Putative uncharacterized protein OS=Oryza...   108   1e-22
tr|A7Q315|A7Q315_VITVI Chromosome chr12 scaffold_47, whole genom...   106   5e-22
tr|Q94KD0|Q94KD0_ARATH AT5g58470/mqj2_60 OS=Arabidopsis thaliana...   101   2e-20
tr|Q6S7B1|Q6S7B1_ARATH TAF15b (Fragment) OS=Arabidopsis thaliana...   101   2e-20
tr|Q9FGH5|Q9FGH5_ARATH Genomic DNA, chromosome 5, P1 clone:MQJ2 ...    91   4e-17
tr|Q00ZH4|Q00ZH4_OSTTA Conserved Zn-finger protein (ISS) OS=Ostr...    66   1e-09
tr|A4S472|A4S472_OSTLU Predicted protein OS=Ostreococcus lucimar...    65   2e-09
tr|B4LH33|B4LH33_DROVI GJ12075 OS=Drosophila virilis GN=GJ12075 ...    43   2e-07
tr|B4IXC1|B4IXC1_DROGR GH14692 OS=Drosophila grimshawi GN=GH1469...    41   1e-06
tr|Q2LYN4|Q2LYN4_DROPS GA19321 OS=Drosophila pseudoobscura pseud...    43   1e-06
tr|Q7K204|Q7K204_DROME CG6049, isoform A OS=Drosophila melanogas...    37   1e-05
tr|B4PE28|B4PE28_DROYA GE22336 OS=Drosophila yakuba GN=GE22336 P...    37   1e-05
tr|B3M8J4|B3M8J4_DROAN GF24193 OS=Drosophila ananassae GN=GF2419...    35   2e-05
tr|B3NE82|B3NE82_DROER GG13238 OS=Drosophila erecta GN=GG13238 P...    37   4e-05
tr|A4RMZ4|A4RMZ4_MAGGR Putative uncharacterized protein OS=Magna...    33   0.003
tr|B4N4Z4|B4N4Z4_DROWI GK20417 OS=Drosophila willistoni GN=GK204...    35   0.009
tr|B4KWT8|B4KWT8_DROMO GI13305 (Fragment) OS=Drosophila mojavens...    41   0.026
tr|A7RF99|A7RF99_NEMVE Predicted protein OS=Nematostella vectens...    38   0.22 
tr|Q803E3|Q803E3_DANRE Ewing sarcoma breakpoint region 1b OS=Dan...    37   0.37 
tr|Q6NWA7|Q6NWA7_DANRE Ewsr1b protein (Fragment) OS=Danio rerio ...    37   0.37 
tr|Q4QRG0|Q4QRG0_DANRE Ewing sarcoma breakpoint region 1b OS=Dan...    37   0.37 
tr|Q5CJX5|Q5CJX5_CRYHO RNA binding protein OS=Cryptosporidium ho...    37   0.37 
tr|Q7SZR6|Q7SZR6_DANRE Ewsr1a protein (Fragment) OS=Danio rerio ...    37   0.49 
tr|Q6NUX1|Q6NUX1_DANRE Ewsr1a protein (Fragment) OS=Danio rerio ...    37   0.49 
tr|B0WGP5|B0WGP5_CULQU Putative uncharacterized protein OS=Culex...    37   0.49 
tr|Q4RT01|Q4RT01_TETNG Chromosome 12 SCAF14999, whole genome sho...    37   0.63 

>tr|A9U3C2|A9U3C2_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_173455 PE=4 SV=1
          Length = 481

 Score =  110 bits (275), Expect = 3e-23
 Identities = 49/63 (77%), Positives = 56/63 (88%)
 Frame = +2

Query: 293 VARIKQKRGYKDQWPWNIKLYTDNAGQNKGDGVLVYEDPSAAHSAGGFFNDHVLRGHQIK 472
           VARIKQKRGYKDQWP+NIK+Y D +G+NKGD VL YEDP AAHSAGGFFND+ +RGH+IK
Sbjct: 238 VARIKQKRGYKDQWPYNIKIYQDESGKNKGDAVLSYEDPHAAHSAGGFFNDYEMRGHKIK 297

Query: 473 VIM 481
           V M
Sbjct: 298 VAM 300



 Score = 81.6 bits (200), Expect = 2e-14
 Identities = 40/60 (66%), Positives = 45/60 (75%), Gaps = 9/60 (15%)
 Frame = +3

Query: 3   GGGGSES---------VKVKQCDENCNETCDNARIYISGLPLDTTTDELRELFGGIGQIA 155
           GG G++S         V VKQCDENC ++CDNARIYISGLPLD   DELRELFGGIGQ+A
Sbjct: 180 GGYGAQSREESKDAVDVPVKQCDENCGDSCDNARIYISGLPLDVKEDELRELFGGIGQVA 239


>tr|A9T0V1|A9T0V1_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_231987 PE=4 SV=1
          Length = 336

 Score =  110 bits (274), Expect = 5e-23
 Identities = 48/63 (76%), Positives = 56/63 (88%)
 Frame = +2

Query: 293 VARIKQKRGYKDQWPWNIKLYTDNAGQNKGDGVLVYEDPSAAHSAGGFFNDHVLRGHQIK 472
           VAR+KQKRGYKDQWP+NIK+Y D +G+NKGD VL YEDP AAHSAGGFFND+ +RGH+IK
Sbjct: 235 VARVKQKRGYKDQWPYNIKIYQDESGKNKGDAVLSYEDPHAAHSAGGFFNDYEMRGHKIK 294

Query: 473 VIM 481
           V M
Sbjct: 295 VAM 297



 Score = 83.6 bits (205), Expect = 5e-15
 Identities = 37/48 (77%), Positives = 42/48 (87%)
 Frame = +3

Query: 12  GSESVKVKQCDENCNETCDNARIYISGLPLDTTTDELRELFGGIGQIA 155
           GS+ V VKQCDENC ++CDNARIYISGLPLD   DEL+ELFGGIGQ+A
Sbjct: 189 GSKDVPVKQCDENCGDSCDNARIYISGLPLDVKEDELQELFGGIGQVA 236


>tr|Q0JQG3|Q0JQG3_ORYSJ Os01g0164400 protein (Fragment) OS=Oryza
           sativa subsp. japonica GN=Os01g0164400 PE=4 SV=1
          Length = 283

 Score =  108 bits (270), Expect = 1e-22
 Identities = 46/63 (73%), Positives = 56/63 (88%)
 Frame = +2

Query: 293 VARIKQKRGYKDQWPWNIKLYTDNAGQNKGDGVLVYEDPSAAHSAGGFFNDHVLRGHQIK 472
           V RIKQKRGYKDQWPWNIK+YTD++G+NKGD  L YEDPSAAHSAGGF+N++ +RG++I 
Sbjct: 172 VGRIKQKRGYKDQWPWNIKIYTDDSGKNKGDACLAYEDPSAAHSAGGFYNNYEMRGYKIS 231

Query: 473 VIM 481
           V M
Sbjct: 232 VAM 234



 Score = 77.8 bits (190), Expect = 2e-13
 Identities = 37/57 (64%), Positives = 42/57 (73%), Gaps = 7/57 (12%)
 Frame = +3

Query: 3   GGGG-------SESVKVKQCDENCNETCDNARIYISGLPLDTTTDELRELFGGIGQI 152
           GGGG         + KVKQCD NC+ETCDNARIYIS LP D T +EL+ELFGGIGQ+
Sbjct: 116 GGGGYTGSAAPEPAAKVKQCDANCDETCDNARIYISNLPPDVTVEELQELFGGIGQV 172


>tr|B8ADF0|B8ADF0_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_00526 PE=4 SV=1
          Length = 440

 Score =  108 bits (270), Expect = 1e-22
 Identities = 46/63 (73%), Positives = 56/63 (88%)
 Frame = +2

Query: 293 VARIKQKRGYKDQWPWNIKLYTDNAGQNKGDGVLVYEDPSAAHSAGGFFNDHVLRGHQIK 472
           V RIKQKRGYKDQWPWNIK+YTD++G+NKGD  L YEDPSAAHSAGGF+N++ +RG++I 
Sbjct: 329 VGRIKQKRGYKDQWPWNIKIYTDDSGKNKGDACLAYEDPSAAHSAGGFYNNYEMRGYKIS 388

Query: 473 VIM 481
           V M
Sbjct: 389 VAM 391



 Score = 77.8 bits (190), Expect = 2e-13
 Identities = 37/57 (64%), Positives = 42/57 (73%), Gaps = 7/57 (12%)
 Frame = +3

Query: 3   GGGG-------SESVKVKQCDENCNETCDNARIYISGLPLDTTTDELRELFGGIGQI 152
           GGGG         + KVKQCD NC+ETCDNARIYIS LP D T +EL+ELFGGIGQ+
Sbjct: 273 GGGGYTGSAAPEPAAKVKQCDANCDETCDNARIYISNLPPDVTVEELQELFGGIGQV 329


>tr|A2ZPL7|A2ZPL7_ORYSJ Putative uncharacterized protein OS=Oryza
           sativa subsp. japonica GN=OsJ_000489 PE=4 SV=1
          Length = 578

 Score =  108 bits (270), Expect = 1e-22
 Identities = 46/63 (73%), Positives = 56/63 (88%)
 Frame = +2

Query: 293 VARIKQKRGYKDQWPWNIKLYTDNAGQNKGDGVLVYEDPSAAHSAGGFFNDHVLRGHQIK 472
           V RIKQKRGYKDQWPWNIK+YTD++G+NKGD  L YEDPSAAHSAGGF+N++ +RG++I 
Sbjct: 467 VGRIKQKRGYKDQWPWNIKIYTDDSGKNKGDACLAYEDPSAAHSAGGFYNNYEMRGYKIS 526

Query: 473 VIM 481
           V M
Sbjct: 527 VAM 529



 Score = 77.8 bits (190), Expect = 2e-13
 Identities = 37/57 (64%), Positives = 42/57 (73%), Gaps = 7/57 (12%)
 Frame = +3

Query: 3   GGGG-------SESVKVKQCDENCNETCDNARIYISGLPLDTTTDELRELFGGIGQI 152
           GGGG         + KVKQCD NC+ETCDNARIYIS LP D T +EL+ELFGGIGQ+
Sbjct: 411 GGGGYTGSAAPEPAAKVKQCDANCDETCDNARIYISNLPPDVTVEELQELFGGIGQV 467


>tr|A7Q315|A7Q315_VITVI Chromosome chr12 scaffold_47, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00029111001
           PE=4 SV=1
          Length = 341

 Score =  106 bits (265), Expect = 5e-22
 Identities = 46/63 (73%), Positives = 53/63 (84%)
 Frame = +2

Query: 293 VARIKQKRGYKDQWPWNIKLYTDNAGQNKGDGVLVYEDPSAAHSAGGFFNDHVLRGHQIK 472
           V RIKQKRGYKDQWPWNIK+YTD  G NKGD  L YEDPSAAHSAGGF+N++ +RG++I 
Sbjct: 226 VGRIKQKRGYKDQWPWNIKIYTDEGGNNKGDACLSYEDPSAAHSAGGFYNNYEMRGYKIN 285

Query: 473 VIM 481
           V M
Sbjct: 286 VAM 288



 Score = 83.6 bits (205), Expect = 5e-15
 Identities = 39/53 (73%), Positives = 44/53 (83%), Gaps = 3/53 (5%)
 Frame = +3

Query: 3   GGGGSES---VKVKQCDENCNETCDNARIYISGLPLDTTTDELRELFGGIGQI 152
           GGGGS +   VKVKQCDENC ++CDN+RIYIS LP D T DELRELFGGIGQ+
Sbjct: 174 GGGGSTTEAPVKVKQCDENCGDSCDNSRIYISNLPPDVTVDELRELFGGIGQV 226


>tr|Q94KD0|Q94KD0_ARATH AT5g58470/mqj2_60 OS=Arabidopsis thaliana
           GN=At5g58470 PE=2 SV=1
          Length = 422

 Score =  101 bits (251), Expect = 2e-20
 Identities = 45/63 (71%), Positives = 52/63 (82%)
 Frame = +2

Query: 293 VARIKQKRGYKDQWPWNIKLYTDNAGQNKGDGVLVYEDPSAAHSAGGFFNDHVLRGHQIK 472
           V RIKQKRGYKDQWP+NIK+YTD  G  KGD  L YEDPSAAHSAGGFFN++ +RG++I 
Sbjct: 306 VGRIKQKRGYKDQWPYNIKIYTDEKGNYKGDACLAYEDPSAAHSAGGFFNNYEMRGNKIS 365

Query: 473 VIM 481
           V M
Sbjct: 366 VTM 368



 Score = 73.2 bits (178), Expect = 6e-12
 Identities = 31/42 (73%), Positives = 37/42 (88%)
 Frame = +3

Query: 27  KVKQCDENCNETCDNARIYISGLPLDTTTDELRELFGGIGQI 152
           KVKQCD +C++ CDNARIYIS LP D TTDEL++LFGGIGQ+
Sbjct: 265 KVKQCDADCDDNCDNARIYISNLPPDVTTDELKDLFGGIGQV 306


>tr|Q6S7B1|Q6S7B1_ARATH TAF15b (Fragment) OS=Arabidopsis thaliana
           GN=TAF15b PE=2 SV=1
          Length = 387

 Score =  101 bits (251), Expect = 2e-20
 Identities = 45/63 (71%), Positives = 52/63 (82%)
 Frame = +2

Query: 293 VARIKQKRGYKDQWPWNIKLYTDNAGQNKGDGVLVYEDPSAAHSAGGFFNDHVLRGHQIK 472
           V RIKQKRGYKDQWP+NIK+YTD  G  KGD  L YEDPSAAHSAGGFFN++ +RG++I 
Sbjct: 306 VGRIKQKRGYKDQWPYNIKIYTDEKGNYKGDACLAYEDPSAAHSAGGFFNNYEMRGNKIS 365

Query: 473 VIM 481
           V M
Sbjct: 366 VTM 368



 Score = 73.2 bits (178), Expect = 6e-12
 Identities = 31/42 (73%), Positives = 37/42 (88%)
 Frame = +3

Query: 27  KVKQCDENCNETCDNARIYISGLPLDTTTDELRELFGGIGQI 152
           KVKQCD +C++ CDNARIYIS LP D TTDEL++LFGGIGQ+
Sbjct: 265 KVKQCDADCDDNCDNARIYISNLPPDVTTDELKDLFGGIGQV 306


>tr|Q9FGH5|Q9FGH5_ARATH Genomic DNA, chromosome 5, P1 clone:MQJ2
           OS=Arabidopsis thaliana PE=4 SV=1
          Length = 363

 Score = 90.5 bits (223), Expect = 4e-17
 Identities = 40/50 (80%), Positives = 42/50 (84%)
 Frame = +2

Query: 293 VARIKQKRGYKDQWPWNIKLYTDNAGQNKGDGVLVYEDPSAAHSAGGFFN 442
           V RIKQKRGYKDQWP+NIK+YTD  G  KGD  L YEDPSAAHSAGGFFN
Sbjct: 306 VGRIKQKRGYKDQWPYNIKIYTDEKGNYKGDACLAYEDPSAAHSAGGFFN 355



 Score = 73.2 bits (178), Expect = 6e-12
 Identities = 31/42 (73%), Positives = 37/42 (88%)
 Frame = +3

Query: 27  KVKQCDENCNETCDNARIYISGLPLDTTTDELRELFGGIGQI 152
           KVKQCD +C++ CDNARIYIS LP D TTDEL++LFGGIGQ+
Sbjct: 265 KVKQCDADCDDNCDNARIYISNLPPDVTTDELKDLFGGIGQV 306


>tr|Q00ZH4|Q00ZH4_OSTTA Conserved Zn-finger protein (ISS)
           OS=Ostreococcus tauri GN=Ot10g03500 PE=4 SV=1
          Length = 279

 Score = 65.9 bits (159), Expect = 1e-09
 Identities = 26/63 (41%), Positives = 42/63 (66%)
 Frame = +2

Query: 293 VARIKQKRGYKDQWPWNIKLYTDNAGQNKGDGVLVYEDPSAAHSAGGFFNDHVLRGHQIK 472
           ++R+KQ+ G+ DQWP+ +K+Y D  G+ K + V+ Y+DP AA SA  F+N +   G ++ 
Sbjct: 124 ISRVKQRTGFPDQWPYAVKIYRDERGEKKDEAVITYDDPHAAQSAPEFYNGYEHNGKKLH 183

Query: 473 VIM 481
           V M
Sbjct: 184 VSM 186