BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP916495|Adiantum capillus-veneris mRNA, clone:
YMU001_000088_C11.
         (506 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q75JZ1|GTAC_DICDI GATA zinc finger domain-containing protein ...    33   0.58 
sp|P91875|RPA1_DROME DNA-directed RNA polymerase I subunit RPA1 ...    31   3.8  
sp|P28706|RAD13_SCHPO DNA repair protein rad13 OS=Schizosaccharo...    30   8.4  

>sp|Q75JZ1|GTAC_DICDI GATA zinc finger domain-containing protein 3
           OS=Dictyostelium discoideum GN=gtaC PE=4 SV=1
          Length = 587

 Score = 33.5 bits (75), Expect = 0.58
 Identities = 22/79 (27%), Positives = 41/79 (51%), Gaps = 2/79 (2%)
 Frame = -3

Query: 501 SNYKLISNSSQPHSPSNAR-KLLCATRMPINL*Q-NSVIPNMPSWTKEMTSSQYTSDNQV 328
           ++Y+L  NSS P+SP+++       T M +NL    S++ + P+      SS + +D++ 
Sbjct: 176 NSYQLAHNSSMPNSPTSSNISPSTPTSMALNLSSLKSILDSPPAAPAHSASSSHNNDHRT 235

Query: 327 INTIDS*RN*RTYKNHGIN 271
           +N   +  N     N+ IN
Sbjct: 236 LNINGNHHNNNNNINNNIN 254


>sp|P91875|RPA1_DROME DNA-directed RNA polymerase I subunit RPA1
           OS=Drosophila melanogaster GN=RpI1 PE=1 SV=2
          Length = 1642

 Score = 30.8 bits (68), Expect = 3.8
 Identities = 16/46 (34%), Positives = 25/46 (54%)
 Frame = -1

Query: 218 DPPGMNTWLPTKNAQSLQARINIANLGFSSQKNGICVLSRHITQPD 81
           D  G  T++P  NA     R ++A L  S+ K+GI ++ RH+   D
Sbjct: 481 DKNGFTTYIPADNASK---RESLAKLLLSNPKDGIKIVHRHVLNGD 523


>sp|P28706|RAD13_SCHPO DNA repair protein rad13
           OS=Schizosaccharomyces pombe GN=rad13 PE=2 SV=2
          Length = 1112

 Score = 29.6 bits (65), Expect = 8.4
 Identities = 13/38 (34%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
 Frame = -2

Query: 379 LMDERDDELPIYL*QSSN*YDRFIEKLT--HIQKSWNK 272
           L+DE ++E+ I + +    YDRF+ +L   H  + WN+
Sbjct: 691 LLDEEEEEMIIRMAEEEKEYDRFVSELNQRHETEEWNQ 728

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP916495|Adiantum capillus-veneris mRNA, clone:
YMU001_000088_C11.
         (506 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9RGU9|A9RGU9_PHYPA Predicted protein OS=Physcomitrella paten...    33   6.0  
tr|B2Q415|B2Q415_PROST Putative uncharacterized protein OS=Provi...    33   7.8  

>tr|A9RGU9|A9RGU9_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_104542 PE=4 SV=1
          Length = 521

 Score = 33.5 bits (75), Expect = 6.0
 Identities = 15/30 (50%), Positives = 19/30 (63%)
 Frame = +2

Query: 2   KLSGVCDAQNGTNTRHNSETQLVVDSYQVV 91
           K+  V + Q+G   +    TQLVVDSYQVV
Sbjct: 492 KVGSVVECQSGNTVKFGRRTQLVVDSYQVV 521


>tr|B2Q415|B2Q415_PROST Putative uncharacterized protein
           OS=Providencia stuartii ATCC 25827 GN=PROSTU_01691 PE=4
           SV=1
          Length = 456

 Score = 33.1 bits (74), Expect = 7.8
 Identities = 25/86 (29%), Positives = 36/86 (41%)
 Frame = -3

Query: 420 PINL*QNSVIPNMPSWTKEMTSSQYTSDNQVINTIDS*RN*RTYKNHGINFLALWHFLGR 241
           PI    N    N+P     MT S + +DN VI         +TY + G  F+      G+
Sbjct: 108 PIESGMNFHSTNLPLHENGMTISAFNADNNVIYK-------KTYYSIGGGFIVDEEHFGQ 160

Query: 240 QAEASIHGPSRYEHMVAHKKCTKLTG 163
             E S+  P  Y++    +K  K TG
Sbjct: 161 STEQSVQVPYPYKYAADLQKHCKETG 186