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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP916497
Clone id YMU001_000088_D01
Library
Length 539
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000088_D01.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
AGATAATTACTCATCATTCTCAGCAGGTCTGATTGTACAAGTGTCCAAGTTATAAGTGCC
TATCTTGTACATGAAATGTATCCAAATCTCCCAATACGGGGGCATAAAACACCGTTAACC
TCCTATTCACGAGGAATGATAGAGGGCCGCCTTTGCAACCATGCTTTGTTCAATTCATCA
TTAACAATAACAACAAAGCAATGTTGCAATAACACCGACAGCCGCATCAAGAACCAGAGC
TGCTAATCCCCCTTCTTGGTGATGTTGTCCATATTTTAACTTCCAGCTGGCTGTGTGGCT
ACACTCGTCGCCGCTGCCGCTGCTGCAGAGGCCGTTGCTGCAGCCGCAGCACCAGCTACA
GCTGCTGCTGCAGGTATAGAGGAAGAAGGCTCCTTCAGAGATGCCAATGTAGCAGCAACA
GGAGCCAACGCCGCCTCTCTCTCAGCAGCCACCTTGGCAAGGAGCTCCTTGATCTGTGTT
CCCGTCAGAGTCTCATGCTCTAGCAGAGCTTTGGCCAATGCACGCAGTTCATCCTGGTG
■■Homology search results ■■ -
sp_hit_id Q8LQJ8
Definition sp|Q8LQJ8|FTSH5_ORYSJ Cell division protease ftsH homolog 5, mitochondrial OS=Oryza sativa subsp. japonica
Align length 24
Score (bit) 40.0
E-value 0.007
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP916497|Adiantum capillus-veneris mRNA, clone:
YMU001_000088_D01.
         (539 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q8LQJ8|FTSH5_ORYSJ Cell division protease ftsH homolog 5, mit...    40   0.007
sp|Q8LQJ9|FTSH4_ORYSJ Cell division protease ftsH homolog 4, mit...    36   0.10 
sp|Q1RGP0|FTSH_RICBR Cell division protease ftsH homolog OS=Rick...    36   0.14 
sp|O80983|FTSH4_ARATH Cell division protease ftsH homolog 4, mit...    35   0.30 
sp|Q68XR9|FTSH_RICTY Cell division protease ftsH homolog OS=Rick...    34   0.52 
sp|Q9ZEA2|FTSH_RICPR Cell division protease ftsH homolog OS=Rick...    34   0.52 
sp|Q4UN68|FTSH_RICFE Cell division protease ftsH homolog OS=Rick...    34   0.52 
sp|Q92JJ9|FTSH_RICCN Cell division protease ftsH homolog OS=Rick...    34   0.52 
sp|Q9FGM0|FTSHB_ARATH Cell division protease ftsH homolog 11, ch...    31   3.4  
sp|A2ZVG7|FTSH9_ORYSJ Cell division protease ftsH homolog 9, chl...    31   4.4  
sp|Q13219|PAPP1_HUMAN Pappalysin-1 OS=Homo sapiens GN=PAPPA PE=1...    30   5.7  
sp|Q9SS45|PAL4_ARATH Phenylalanine ammonia-lyase 4 OS=Arabidopsi...    30   7.5  
sp|Q9K0D9|KTHY_NEIMB Thymidylate kinase OS=Neisseria meningitidi...    30   9.8  
sp|Q5F9Z5|KTHY_NEIG1 Thymidylate kinase OS=Neisseria gonorrhoeae...    30   9.8  

>sp|Q8LQJ8|FTSH5_ORYSJ Cell division protease ftsH homolog 5,
           mitochondrial OS=Oryza sativa subsp. japonica GN=FTSH5
           PE=3 SV=1
          Length = 715

 Score = 40.0 bits (92), Expect = 0.007
 Identities = 19/24 (79%), Positives = 19/24 (79%)
 Frame = -1

Query: 539 HQDELRALAKALLEHETLTGTQIK 468
           H  EL ALA ALLEHETLTG QIK
Sbjct: 632 HNKELHALANALLEHETLTGAQIK 655


>sp|Q8LQJ9|FTSH4_ORYSJ Cell division protease ftsH homolog 4,
           mitochondrial OS=Oryza sativa subsp. japonica GN=FTSH4
           PE=3 SV=1
          Length = 709

 Score = 36.2 bits (82), Expect = 0.10
 Identities = 17/24 (70%), Positives = 18/24 (75%)
 Frame = -1

Query: 539 HQDELRALAKALLEHETLTGTQIK 468
           H  E   LA+ALLEHETLTG QIK
Sbjct: 625 HSKEHHVLAQALLEHETLTGAQIK 648


>sp|Q1RGP0|FTSH_RICBR Cell division protease ftsH homolog
           OS=Rickettsia bellii (strain RML369-C) GN=ftsH PE=3 SV=1
          Length = 638

 Score = 35.8 bits (81), Expect = 0.14
 Identities = 16/24 (66%), Positives = 20/24 (83%)
 Frame = -1

Query: 539 HQDELRALAKALLEHETLTGTQIK 468
           H D+L  LAKAL+E+ETL+G QIK
Sbjct: 568 HLDQLHILAKALIEYETLSGQQIK 591


>sp|O80983|FTSH4_ARATH Cell division protease ftsH homolog 4,
           mitochondrial OS=Arabidopsis thaliana GN=FTSH4 PE=1 SV=2
          Length = 717

 Score = 34.7 bits (78), Expect = 0.30
 Identities = 16/24 (66%), Positives = 19/24 (79%)
 Frame = -1

Query: 539 HQDELRALAKALLEHETLTGTQIK 468
           +  EL ALA ALL+HETL+G QIK
Sbjct: 629 YNKELHALANALLQHETLSGKQIK 652


>sp|Q68XR9|FTSH_RICTY Cell division protease ftsH homolog
           OS=Rickettsia typhi GN=ftsH PE=3 SV=1
          Length = 637

 Score = 33.9 bits (76), Expect = 0.52
 Identities = 15/24 (62%), Positives = 19/24 (79%)
 Frame = -1

Query: 539 HQDELRALAKALLEHETLTGTQIK 468
           H D+L  LA AL+E+ETL+G QIK
Sbjct: 567 HIDQLHTLANALIEYETLSGQQIK 590


>sp|Q9ZEA2|FTSH_RICPR Cell division protease ftsH homolog
           OS=Rickettsia prowazekii GN=ftsH PE=3 SV=1
          Length = 637

 Score = 33.9 bits (76), Expect = 0.52
 Identities = 15/24 (62%), Positives = 19/24 (79%)
 Frame = -1

Query: 539 HQDELRALAKALLEHETLTGTQIK 468
           H D+L  LA AL+E+ETL+G QIK
Sbjct: 567 HIDQLHTLANALIEYETLSGQQIK 590


>sp|Q4UN68|FTSH_RICFE Cell division protease ftsH homolog
           OS=Rickettsia felis GN=ftsH PE=3 SV=1
          Length = 635

 Score = 33.9 bits (76), Expect = 0.52
 Identities = 15/24 (62%), Positives = 19/24 (79%)
 Frame = -1

Query: 539 HQDELRALAKALLEHETLTGTQIK 468
           H D+L  LA AL+E+ETL+G QIK
Sbjct: 567 HIDQLHTLANALIEYETLSGQQIK 590


>sp|Q92JJ9|FTSH_RICCN Cell division protease ftsH homolog
           OS=Rickettsia conorii GN=ftsH PE=3 SV=1
          Length = 637

 Score = 33.9 bits (76), Expect = 0.52
 Identities = 15/24 (62%), Positives = 19/24 (79%)
 Frame = -1

Query: 539 HQDELRALAKALLEHETLTGTQIK 468
           H D+L  LA AL+E+ETL+G QIK
Sbjct: 567 HIDQLHTLANALIEYETLSGQQIK 590


>sp|Q9FGM0|FTSHB_ARATH Cell division protease ftsH homolog 11,
           chloroplastic/mitochondrial OS=Arabidopsis thaliana
           GN=FTSH11 PE=1 SV=1
          Length = 806

 Score = 31.2 bits (69), Expect = 3.4
 Identities = 14/24 (58%), Positives = 17/24 (70%)
 Frame = -1

Query: 539 HQDELRALAKALLEHETLTGTQIK 468
           H+ +L  LA ALLE+ETLT   IK
Sbjct: 758 HEKQLHTLANALLEYETLTAEDIK 781


>sp|A2ZVG7|FTSH9_ORYSJ Cell division protease ftsH homolog 9,
           chloroplastic/mitochondrial OS=Oryza sativa subsp.
           japonica GN=FTSH9 PE=3 SV=1
          Length = 784

 Score = 30.8 bits (68), Expect = 4.4
 Identities = 14/23 (60%), Positives = 17/23 (73%)
 Frame = -1

Query: 539 HQDELRALAKALLEHETLTGTQI 471
           H+ +L ALA ALLE ETLT  +I
Sbjct: 739 HEKQLHALANALLERETLTADEI 761
tr_hit_id B8LM83
Definition tr|B8LM83|B8LM83_PICSI Putative uncharacterized protein OS=Picea sitchensis
Align length 24
Score (bit) 42.4
E-value 0.016
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP916497|Adiantum capillus-veneris mRNA, clone:
YMU001_000088_D01.
         (539 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B8LM83|B8LM83_PICSI Putative uncharacterized protein OS=Picea...    42   0.016
tr|B8AAS6|B8AAS6_ORYSI Putative uncharacterized protein OS=Oryza...    40   0.078
tr|A7P4L7|A7P4L7_VITVI Chromosome chr4 scaffold_6, whole genome ...    40   0.078
tr|Q6KC90|Q6KC90_PEA FtsH-like protease OS=Pisum sativum GN=ftsh...    36   1.1  
tr|Q656T8|Q656T8_ORYSJ Cell division protein(FtsH)-like OS=Oryza...    36   1.1  
tr|A2WRN7|A2WRN7_ORYSI Putative uncharacterized protein OS=Oryza...    36   1.1  
tr|A8GY98|A8GY98_RICB8 ATP-dependent metalloprotease FtsH OS=Ric...    36   1.5  
tr|Q1NC85|Q1NC85_9SPHN ATP-dependent metalloprotease FtsH OS=Sph...    36   1.5  
tr|Q84LQ3|Q84LQ3_SOLLC Putative FtsH protease OS=Solanum lycoper...    36   1.5  
tr|Q2LGZ9|Q2LGZ9_TRIMO Putative FtsH protease (Fragment) OS=Trit...    36   1.5  
tr|Q1EI28|Q1EI28_9ZZZZ Putative ATP-dependent Zn protease OS=unc...    35   2.5  
tr|A0NNC8|A0NNC8_9RHOB Metalloprotease (Cell division protein) F...    35   2.5  
tr|A7IJX0|A7IJX0_XANP2 ATP-dependent metalloprotease FtsH OS=Xan...    35   3.3  
tr|B8IP17|B8IP17_METNO ATP-dependent metalloprotease FtsH OS=Met...    35   3.3  
tr|B1ZBS0|B1ZBS0_METPB ATP-dependent metalloprotease FtsH OS=Met...    34   4.3  
tr|B1M3G1|B1M3G1_METRJ ATP-dependent metalloprotease FtsH OS=Met...    34   4.3  
tr|Q2GC98|Q2GC98_NOVAD Membrane protease FtsH catalytic subunit ...    34   5.6  
tr|B0BVY5|B0BVY5_RICRO Cell division protein OS=Rickettsia ricke...    34   5.6  
tr|A9HB14|A9HB14_GLUDA Cell division protein ftsH OS=Gluconaceto...    34   5.6  
tr|A8GQJ8|A8GQJ8_RICRS Cell division protein ftsH OS=Rickettsia ...    34   5.6  
tr|A8GLY0|A8GLY0_RICAH Cell division protein ftsH OS=Rickettsia ...    34   5.6  
tr|A8F0E9|A8F0E9_RICM5 ATP-dependent metalloprotease FtsH OS=Ric...    34   5.6  
tr|A8EXB1|A8EXB1_RICCK 50S ribosomal protein L9 OS=Rickettsia ca...    34   5.6  
tr|Q7PAH4|Q7PAH4_RICSI Cell division protein ftsH OS=Rickettsia ...    34   5.6  
tr|B5ZH23|B5ZH23_GLUDA ATP-dependent metalloprotease FtsH OS=Glu...    34   5.6  
tr|B7P699|B7P699_IXOSC ATPase, putative (Fragment) OS=Ixodes sca...    34   5.6  
tr|A3SYJ8|A3SYJ8_9RHOB ATP-dependent metalloprotease FtsH OS=Sul...    33   7.3  
tr|A3SF23|A3SF23_9RHOB ATP-dependent metalloprotease FtsH OS=Sul...    33   7.3  
tr|Q38AK2|Q38AK2_9TRYP Mitochondrial ATP-dependent zinc metallop...    33   7.3  

>tr|B8LM83|B8LM83_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 142

 Score = 42.4 bits (98), Expect = 0.016
 Identities = 20/24 (83%), Positives = 21/24 (87%)
 Frame = -1

Query: 539 HQDELRALAKALLEHETLTGTQIK 468
           HQ EL ALAKALLEHETL+G QIK
Sbjct: 55  HQKELHALAKALLEHETLSGNQIK 78


>tr|B8AAS6|B8AAS6_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_02523 PE=4 SV=1
          Length = 702

 Score = 40.0 bits (92), Expect = 0.078
 Identities = 19/24 (79%), Positives = 19/24 (79%)
 Frame = -1

Query: 539 HQDELRALAKALLEHETLTGTQIK 468
           H  EL ALA ALLEHETLTG QIK
Sbjct: 619 HNKELHALANALLEHETLTGAQIK 642


>tr|A7P4L7|A7P4L7_VITVI Chromosome chr4 scaffold_6, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00032199001
           PE=4 SV=1
          Length = 500

 Score = 40.0 bits (92), Expect = 0.078
 Identities = 19/24 (79%), Positives = 19/24 (79%)
 Frame = -1

Query: 539 HQDELRALAKALLEHETLTGTQIK 468
           H  EL ALA ALLEHETLTG QIK
Sbjct: 410 HSKELHALANALLEHETLTGNQIK 433


>tr|Q6KC90|Q6KC90_PEA FtsH-like protease OS=Pisum sativum GN=ftsh4
           PE=2 SV=1
          Length = 706

 Score = 36.2 bits (82), Expect = 1.1
 Identities = 17/23 (73%), Positives = 19/23 (82%)
 Frame = -1

Query: 539 HQDELRALAKALLEHETLTGTQI 471
           H+ EL ALA ALLE ETLTG+QI
Sbjct: 628 HEKELHALANALLEQETLTGSQI 650


>tr|Q656T8|Q656T8_ORYSJ Cell division protein(FtsH)-like OS=Oryza
           sativa subsp. japonica GN=B1151A10.24-1 PE=4 SV=1
          Length = 115

 Score = 36.2 bits (82), Expect = 1.1
 Identities = 17/24 (70%), Positives = 18/24 (75%)
 Frame = -1

Query: 539 HQDELRALAKALLEHETLTGTQIK 468
           H  E   LA+ALLEHETLTG QIK
Sbjct: 31  HSKEHHVLAQALLEHETLTGAQIK 54


>tr|A2WRN7|A2WRN7_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_02522 PE=4 SV=1
          Length = 709

 Score = 36.2 bits (82), Expect = 1.1
 Identities = 17/24 (70%), Positives = 18/24 (75%)
 Frame = -1

Query: 539 HQDELRALAKALLEHETLTGTQIK 468
           H  E   LA+ALLEHETLTG QIK
Sbjct: 625 HSKEHHVLAQALLEHETLTGAQIK 648


>tr|A8GY98|A8GY98_RICB8 ATP-dependent metalloprotease FtsH
           OS=Rickettsia bellii (strain OSU 85-389) GN=A1I_07750
           PE=4 SV=1
          Length = 637

 Score = 35.8 bits (81), Expect = 1.5
 Identities = 16/24 (66%), Positives = 20/24 (83%)
 Frame = -1

Query: 539 HQDELRALAKALLEHETLTGTQIK 468
           H D+L  LAKAL+E+ETL+G QIK
Sbjct: 567 HLDQLHILAKALIEYETLSGQQIK 590


>tr|Q1NC85|Q1NC85_9SPHN ATP-dependent metalloprotease FtsH
           OS=Sphingomonas sp. SKA58 GN=SKA58_12962 PE=4 SV=1
          Length = 650

 Score = 35.8 bits (81), Expect = 1.5
 Identities = 15/24 (62%), Positives = 20/24 (83%)
 Frame = -1

Query: 539 HQDELRALAKALLEHETLTGTQIK 468
           H+D+L  LA A+LE+ETLTG +IK
Sbjct: 581 HEDQLHLLANAMLEYETLTGEEIK 604


>tr|Q84LQ3|Q84LQ3_SOLLC Putative FtsH protease OS=Solanum
           lycopersicum PE=2 SV=1
          Length = 714

 Score = 35.8 bits (81), Expect = 1.5
 Identities = 18/24 (75%), Positives = 18/24 (75%)
 Frame = -1

Query: 539 HQDELRALAKALLEHETLTGTQIK 468
           H  EL ALA ALLE ETLTG QIK
Sbjct: 627 HNKELHALANALLEKETLTGGQIK 650


>tr|Q2LGZ9|Q2LGZ9_TRIMO Putative FtsH protease (Fragment)
           OS=Triticum monococcum PE=4 SV=1
          Length = 531

 Score = 35.8 bits (81), Expect = 1.5
 Identities = 16/23 (69%), Positives = 18/23 (78%)
 Frame = -1

Query: 539 HQDELRALAKALLEHETLTGTQI 471
           H  EL ALA ALLEHET++GT I
Sbjct: 504 HNKELHALANALLEHETMSGTSI 526