BP916505 [AcEST]

BP916505
Clone id	YMU001_000088_D09
Library	YMU01
Length	556
Definition	Adiantum capillus-veneris mRNA. clone: YMU001_000088_D09.
Accession	BP916505
Tissue type	prothallium
Developmental stage	-
Contig ID	CL1183Contig1
Sequence	CAGGGGGGCTTGCAATTCTACAGCGGTTGTTCAAAGAAGGTCAAGAGATATATGTGCGAA TTGTGTGTCGTGGAGGGGCGGGCCGTGAGATTGTCTCCATCAAAAAGCCCGAGTTTGCTC CTCCTAGTGAACAGAAGACTATTGAGAGCTTGCGCCTTCATTTTGAACAGGAGAAGAAGA ACCGGATGAATCCCCGCAATCGCAGGCACCAGAACTACTACTGAGGTCTAGTAAGGCTGC ATTCTCTTCTCTAAAGTTGTCTAGCTTACCATGGTATAGGTATGTCTATGTAGGGTACTC AATATGTGTGTGATGTGGATTAGGGTATGCCGTATTGAGCTCAATGTGGCGATACTGGAG GGTGGCCTAGACAGGAGGTAGATTGTGTTTGAGATTTGAGGACTTTGTCATGCCTTGTTG GTCTTCCACTCTTGCAGACATAACTCTCATTATGGGTACATGGGGTCGTGCATCATTTTG GATTGAAAGCAGGAACTTGTAAAGGAGGCAGGACTACTACTGTATGTGTGATCTTGAATG GTTGCGATTAGGACCT
■■Homology search results ■■	-
Swiss-Prot (release 56.9)	Link to BlastX Result : Swiss-Prot
sp_hit_id	-
Definition	No hits.
Align length	-
Score (bit)	-
E-value	-
Report	BLASTX 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BP916505\|Adiantum capillus-veneris mRNA, clone: YMU001_000088_D09. (556 letters) Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters Searching..................................................done *** No hits found ****
TrEMBL (release 39.9)	Link to BlastX Result : TrEMBL
tr_hit_id	A0PYT7
Definition	tr\|A0PYT7\|A0PYT7_CLONN Leucine Rich Repeat domain protein OS=Clostridium novyi (strain NT)
Align length	83
Score (bit)	35.8
E-value	1.6
Report	BLASTX 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BP916505\|Adiantum capillus-veneris mRNA, clone: YMU001_000088_D09. (556 letters) Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value tr\|A0PYT7\|A0PYT7_CLONN Leucine Rich Repeat domain protein OS=Clo... 36 1.6 >tr\|A0PYT7\|A0PYT7_CLONN Leucine Rich Repeat domain protein OS=Clostridium novyi (strain NT) GN=NT01CX_1458 PE=4 SV=1 Length = 906 Score = 35.8 bits (81), Expect = 1.6 Identities = 22/83 (26%), Positives = 38/83 (45%), Gaps = 16/83 (19%) Frame = +3 Query: 15 ILQRLFKEGQEIYVRIVCRGGAGREIVSIKKPEFAPPSEQKTIESLRLHF---------- 164 I+Q+ K+G+ ++ + G G + SIK PE E + +E LR +F Sbjct: 736 IIQKKDKDGKFKTIKEIINDGNGSTVGSIKDPEMKANDEYRILEELRTNFYGDDQYVFTN 795 Query: 165 ------EQEKKNRMNPRNRRHQN 215 E+ KKN + N++ +N Sbjct: 796 VAHAKVEESKKNSTSTSNKQKEN 818