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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP916507
Clone id YMU001_000088_D11
Library
Length 528
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000088_D11.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
ACAATCCTTGACCTTGACCACATAGATCTTTTCAAGCATGTCTTGATTTACTAAATGTTG
TTATTATCACATTCTAACCTTTCTTTTCACATTTCCAGTAAACCATGCCCATGACCATCC
CCACAAGACAGTTCATCCACATAGCATGCAGTTCACAAAATGACACACTTACTTCACACT
GAAACTGTGTTTCAACCATTCTATCTAGCCATCTTATCCCCTCCAAAACTTTGATGCACC
TAAATCCTTGTGCAGACATCTCATCCTTTCGGAACTCTTGATGCACTCACAAGAGTATCA
AAAACTTGATGCTTACATTCATTTCTCATTCACTTAGCTATCACATCCAGATCTCGTTGA
TCTGTAACGGATATCTACATGCAGTAAGTTCCAATCATTCGTTAGAAAAAAGGTTGGAGA
CATTTCATCTTTGTTTACATGTCTCTAGTAATACACACATGAAAGAACACACGTTCAATT
CAATCAACGAAATTTCCAAATCAGTGTACATATTTTCATGAAGTCATT
■■Homology search results ■■ -
sp_hit_id P09081
Definition sp|P09081|BCD_DROME Homeotic protein bicoid OS=Drosophila melanogaster
Align length 27
Score (bit) 34.7
E-value 0.26
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP916507|Adiantum capillus-veneris mRNA, clone:
YMU001_000088_D11.
         (504 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P09081|BCD_DROME Homeotic protein bicoid OS=Drosophila melano...    35   0.26 
sp|Q9QZA1|PHLA1_RAT Pleckstrin homology-like domain family A mem...    34   0.44 
sp|P09022|HXA1_MOUSE Homeobox protein Hox-A1 OS=Mus musculus GN=...    31   2.9  
sp|P22544|BARH1_DROAN Homeobox protein B-H1 OS=Drosophila ananas...    30   4.9  
sp|Q8WV24|PHLA1_HUMAN Pleckstrin homology-like domain family A m...    30   6.4  
sp|Q20624|YL71_CAEEL Uncharacterized protein F49E2.1 OS=Caenorha...    30   8.3  
sp|Q62392|PHLA1_MOUSE Pleckstrin homology-like domain family A m...    30   8.3  

>sp|P09081|BCD_DROME Homeotic protein bicoid OS=Drosophila
           melanogaster GN=bcd PE=1 SV=3
          Length = 494

 Score = 34.7 bits (78), Expect = 0.26
 Identities = 13/27 (48%), Positives = 15/27 (55%)
 Frame = +2

Query: 38  YYHILTFLFTFPVNHAHDHPHKTVHPH 118
           Y+H L    T P  H+H HPH   HPH
Sbjct: 11  YHHPLPHTHTHPHPHSHPHPHSHPHPH 37


>sp|Q9QZA1|PHLA1_RAT Pleckstrin homology-like domain family A member
           1 OS=Rattus norvegicus GN=Phlda1 PE=2 SV=1
          Length = 263

 Score = 33.9 bits (76), Expect = 0.44
 Identities = 15/35 (42%), Positives = 16/35 (45%)
 Frame = +2

Query: 38  YYHILTFLFTFPVNHAHDHPHKTVHPHSMQFTK*H 142
           Y H    L+  P  HAH HPH   HPH  Q    H
Sbjct: 209 YPHPHPHLYPHPHPHAHSHPHPHPHPHPHQLQHAH 243


>sp|P09022|HXA1_MOUSE Homeobox protein Hox-A1 OS=Mus musculus
           GN=Hoxa1 PE=2 SV=2
          Length = 331

 Score = 31.2 bits (69), Expect = 2.9
 Identities = 18/47 (38%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
 Frame = +2

Query: 80  HAHDHPHKTVHPHSMQFTK*HTYFTLKLCFNHS-I*PSYPLQNFDAP 217
           H H H H   HP +  +    T   L + ++HS   PSY  QNF AP
Sbjct: 60  HHHHHHHHHHHPQTATY---QTSGNLGISYSHSSCGPSYGAQNFSAP 103


>sp|P22544|BARH1_DROAN Homeobox protein B-H1 OS=Drosophila ananassae
           GN=B-H1 PE=2 SV=1
          Length = 606

 Score = 30.4 bits (67), Expect = 4.9
 Identities = 10/17 (58%), Positives = 12/17 (70%)
 Frame = +2

Query: 71  PVNHAHDHPHKTVHPHS 121
           P  H+H HPH  VHPH+
Sbjct: 178 PHPHSHPHPHALVHPHA 194


>sp|Q8WV24|PHLA1_HUMAN Pleckstrin homology-like domain family A
           member 1 OS=Homo sapiens GN=PHLDA1 PE=1 SV=3
          Length = 259

 Score = 30.0 bits (66), Expect = 6.4
 Identities = 12/34 (35%), Positives = 17/34 (50%)
 Frame = +2

Query: 71  PVNHAHDHPHKTVHPHSMQFTK*HTYFTLKLCFN 172
           P  H H HPH+  HPH    ++ H +  L+   N
Sbjct: 224 PHPHPHPHPHQIPHPHPQPHSQPHGHRLLRSTSN 257



 Score = 29.6 bits (65), Expect = 8.3
 Identities = 11/24 (45%), Positives = 12/24 (50%)
 Frame = +2

Query: 71  PVNHAHDHPHKTVHPHSMQFTK*H 142
           P +H H HPH   HPH  Q    H
Sbjct: 216 PHSHPHSHPHPHPHPHPHQIPHPH 239


>sp|Q20624|YL71_CAEEL Uncharacterized protein F49E2.1
           OS=Caenorhabditis elegans GN=F49E2.1 PE=2 SV=3
          Length = 600

 Score = 29.6 bits (65), Expect = 8.3
 Identities = 19/68 (27%), Positives = 32/68 (47%)
 Frame = +3

Query: 261 THKSIKNLMLTFISHSLSYHIQISLICNGYLHAVSSNHSLEKRLETFHLCLHVSSNTHMK 440
           ++ S + L     + S+  H+  S + + +LH  SS H    ++  F     VSS TH+ 
Sbjct: 385 SNDSYRGLTPVTSASSILVHLPSSSLYHSHLH--SSRHFFISQIRCFSTTYSVSSITHLL 442

Query: 441 EHTFNSIN 464
            H  N+ N
Sbjct: 443 THVDNNGN 450


>sp|Q62392|PHLA1_MOUSE Pleckstrin homology-like domain family A
           member 1 OS=Mus musculus GN=Phlda1 PE=2 SV=1
          Length = 261

 Score = 29.6 bits (65), Expect = 8.3
 Identities = 12/37 (32%), Positives = 16/37 (43%)
 Frame = +2

Query: 38  YYHILTFLFTFPVNHAHDHPHKTVHPHSMQFTK*HTY 148
           Y H     ++ P  H H HPH   HPH   +   H +
Sbjct: 205 YPHPHPHPYSHPHQHPHPHPHPHPHPHPHPYQLQHAH 241
tr_hit_id Q8I382
Definition tr|Q8I382|Q8I382_PLAF7 Putative uncharacterized protein PFI0330c OS=Plasmodium falciparum (isolate 3D7)
Align length 112
Score (bit) 37.0
E-value 0.53
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP916507|Adiantum capillus-veneris mRNA, clone:
YMU001_000088_D11.
         (504 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q8I382|Q8I382_PLAF7 Putative uncharacterized protein PFI0330c...    37   0.53 
tr|Q1L6A0|Q1L6A0_PLAFA Leucine-rich repeat protein 9 OS=Plasmodi...    37   0.53 
tr|A5K202|A5K202_PLAVI Putative uncharacterized protein OS=Plasm...    37   0.69 
tr|B4KXI7|B4KXI7_DROMO GI11949 OS=Drosophila mojavensis GN=GI119...    36   1.2  
tr|Q4T1F6|Q4T1F6_TETNG Chromosome undetermined SCAF10637, whole ...    35   2.6  
tr|Q7PLL0|Q7PLL0_DROME CG14578, isoform A OS=Drosophila melanoga...    35   2.6  
tr|Q5LJV8|Q5LJV8_DROME CG14578, isoform B OS=Drosophila melanoga...    35   2.6  
tr|B4L5P9|B4L5P9_DROMO GI21772 OS=Drosophila mojavensis GN=GI217...    35   2.6  
tr|B3P2Q4|B3P2Q4_DROER GG10213 OS=Drosophila erecta GN=GG10213 P...    35   2.6  
tr|A1ZE81|A1ZE81_9SPHI Mur ligase family, catalytic domain prote...    34   3.4  
tr|Q8T9W7|Q8T9W7_DROSI Bicoid protein OS=Drosophila simulans GN=...    34   3.4  
tr|B4QYX2|B4QYX2_DROSI Bicoid OS=Drosophila simulans GN=Dsim\bcd...    34   3.4  
tr|B7WNX1|B7WNX1_HUMAN Putative uncharacterized protein ENSP0000...    28   5.8  
tr|Q23DM1|Q23DM1_TETTH Putative uncharacterized protein OS=Tetra...    33   5.8  
tr|B4PSI4|B4PSI4_DROYA GE25828 OS=Drosophila yakuba GN=GE25828 P...    33   7.6  
tr|B4NI20|B4NI20_DROWI GK14259 OS=Drosophila willistoni GN=GK142...    33   7.6  
tr|A8NWA0|A8NWA0_BRUMA T-cell receptor beta chain ANA 11, putati...    33   7.6  
tr|Q4S7A2|Q4S7A2_TETNG Chromosome 1 SCAF14716, whole genome shot...    33   9.9  
tr|B4S4U3|B4S4U3_PROA2 Isopentenyl-diphosphate delta-isomerase, ...    33   9.9  
tr|A8MM28|A8MM28_ALKOO Short chain fatty acid transporter OS=Alk...    33   9.9  
tr|A8QFD1|A8QFD1_BRUMA T-cell receptor beta chain ANA 11, putati...    33   9.9  

>tr|Q8I382|Q8I382_PLAF7 Putative uncharacterized protein PFI0330c
            OS=Plasmodium falciparum (isolate 3D7) GN=PFI0330c PE=4
            SV=1
          Length = 1261

 Score = 37.0 bits (84), Expect = 0.53
 Identities = 26/112 (23%), Positives = 54/112 (48%), Gaps = 2/112 (1%)
 Frame = +3

Query: 159  NCVSTILSSHLIPSKTLMHLNPCADISSFRNS*CTHKSIKNLMLTFISHSLSYHIQISLI 338
            N +S ++S ++IP K ++ LN    ++  +N+      I N +L  +   ++ HI  + I
Sbjct: 955  NILSIMISKNIIPHKNILQLNNLRTLNLRKNNLIYFPYISNFVLDGL---VNIHISHNYI 1011

Query: 339  --CNGYLHAVSSNHSLEKRLETFHLCLHVSSNTHMKEHTFNSINEISKSVYI 488
              CN Y+  + +   + K L    +   +++     E T+N I    K++Y+
Sbjct: 1012 NGCNNYIDKIDNMTYISKNLCEEDIKNKINNINFNNEGTWNKIIPNLKNIYV 1063


>tr|Q1L6A0|Q1L6A0_PLAFA Leucine-rich repeat protein 9 OS=Plasmodium
           falciparum PE=2 SV=1
          Length = 488

 Score = 37.0 bits (84), Expect = 0.53
 Identities = 26/112 (23%), Positives = 54/112 (48%), Gaps = 2/112 (1%)
 Frame = +3

Query: 159 NCVSTILSSHLIPSKTLMHLNPCADISSFRNS*CTHKSIKNLMLTFISHSLSYHIQISLI 338
           N +S ++S ++IP K ++ LN    ++  +N+      I N +L  +   ++ HI  + I
Sbjct: 182 NILSIMISKNIIPHKNILQLNNLRTLNLRKNNLIYFPYISNFVLDGL---VNIHISHNYI 238

Query: 339 --CNGYLHAVSSNHSLEKRLETFHLCLHVSSNTHMKEHTFNSINEISKSVYI 488
             CN Y+  + +   + K L    +   +++     E T+N I    K++Y+
Sbjct: 239 NGCNNYIDKIDNMTYISKNLCEEDIKNKINNINFNNEGTWNKIIPNLKNIYV 290


>tr|A5K202|A5K202_PLAVI Putative uncharacterized protein OS=Plasmodium
            vivax GN=PVX_113955 PE=4 SV=1
          Length = 1128

 Score = 36.6 bits (83), Expect = 0.69
 Identities = 21/61 (34%), Positives = 34/61 (55%)
 Frame = +3

Query: 189  LIPSKTLMHLNPCADISSFRNS*CTHKSIKNLMLTFISHSLSYHIQISLICNGYLHAVSS 368
            LI +KT + +N   D+ SF+N  CT+K +      F++  L+ ++     C GYLH V +
Sbjct: 938  LICAKTFLLVN---DMGSFQNLLCTNKRMAEKQAIFVNSLLNNYLH---HCGGYLHTVKN 991

Query: 369  N 371
            N
Sbjct: 992  N 992


>tr|B4KXI7|B4KXI7_DROMO GI11949 OS=Drosophila mojavensis GN=GI11949
           PE=4 SV=1
          Length = 771

 Score = 35.8 bits (81), Expect = 1.2
 Identities = 15/49 (30%), Positives = 22/49 (44%)
 Frame = +2

Query: 71  PVNHAHDHPHKTVHPHSMQFTK*HTYFTLKLCFNHSI*PSYPLQNFDAP 217
           P +HAH HPH   HPH  Q    H +  +   +   + P+ P  +   P
Sbjct: 711 PHSHAHPHPHPHPHPHQHQHQHPHAHMAVPHGYGQQVAPTAPPTSAQPP 759


>tr|Q4T1F6|Q4T1F6_TETNG Chromosome undetermined SCAF10637, whole
           genome shotgun sequence. (Fragment) OS=Tetraodon
           nigroviridis GN=GSTENG00008847001 PE=4 SV=1
          Length = 743

 Score = 34.7 bits (78), Expect = 2.6
 Identities = 26/83 (31%), Positives = 39/83 (46%), Gaps = 1/83 (1%)
 Frame = +3

Query: 201 KTLMHLNPCADISSFRNS*CTHKSIKNLMLTFISHSLSYHIQISLICNGYLHAVSSNHSL 380
           +T  H NP     +  N    HKS ++      +H  S H   +     Y   +SSNHS 
Sbjct: 454 RTWEHSNPKPSKHALSN----HKSRESSEHNMPNHKTSEHASTNHKSQDY---ISSNHSA 506

Query: 381 EKRLETFHLCL-HVSSNTHMKEH 446
           ++++ + HL   H SSN H K+H
Sbjct: 507 KEQVTSGHLPREHASSNHHPKQH 529


>tr|Q7PLL0|Q7PLL0_DROME CG14578, isoform A OS=Drosophila
           melanogaster GN=CG14578 PE=1 SV=1
          Length = 303

 Score = 34.7 bits (78), Expect = 2.6
 Identities = 13/27 (48%), Positives = 15/27 (55%)
 Frame = +2

Query: 38  YYHILTFLFTFPVNHAHDHPHKTVHPH 118
           Y+H L    T P  H+H HPH   HPH
Sbjct: 11  YHHPLPHTHTHPHPHSHPHPHSHPHPH 37


>tr|Q5LJV8|Q5LJV8_DROME CG14578, isoform B OS=Drosophila
           melanogaster GN=CG14578 PE=3 SV=1
          Length = 308

 Score = 34.7 bits (78), Expect = 2.6
 Identities = 13/27 (48%), Positives = 15/27 (55%)
 Frame = +2

Query: 38  YYHILTFLFTFPVNHAHDHPHKTVHPH 118
           Y+H L    T P  H+H HPH   HPH
Sbjct: 11  YHHPLPHTHTHPHPHSHPHPHSHPHPH 37


>tr|B4L5P9|B4L5P9_DROMO GI21772 OS=Drosophila mojavensis GN=GI21772
           PE=4 SV=1
          Length = 297

 Score = 34.7 bits (78), Expect = 2.6
 Identities = 15/38 (39%), Positives = 19/38 (50%)
 Frame = +2

Query: 65  TFPVNHAHDHPHKTVHPHSMQFTK*HTYFTLKLCFNHS 178
           T P+ H H HPH   HPH       HT+ T+   F+ S
Sbjct: 258 THPLPHPHPHPHALPHPHHQHAHHPHTHETMMEMFHLS 295


>tr|B3P2Q4|B3P2Q4_DROER GG10213 OS=Drosophila erecta GN=GG10213 PE=4
           SV=1
          Length = 495

 Score = 34.7 bits (78), Expect = 2.6
 Identities = 13/27 (48%), Positives = 15/27 (55%)
 Frame = +2

Query: 38  YYHILTFLFTFPVNHAHDHPHKTVHPH 118
           Y+H L    T P  H+H HPH   HPH
Sbjct: 11  YHHPLPHAHTHPHPHSHPHPHSHPHPH 37


>tr|A1ZE81|A1ZE81_9SPHI Mur ligase family, catalytic domain protein
           OS=Microscilla marina ATCC 23134 GN=M23134_04222 PE=3
           SV=1
          Length = 459

 Score = 34.3 bits (77), Expect = 3.4
 Identities = 21/68 (30%), Positives = 35/68 (51%)
 Frame = +2

Query: 89  DHPHKTVHPHSMQFTK*HTYFTLKLCFNHSI*PSYPLQNFDAPKSLCRHLILSELLMHSQ 268
           +HPHK V   ++  T+ H    +KL  NH+      +QN    K++C  L LSE    +Q
Sbjct: 250 EHPHKIVDNQTVLLTEQHGEVKVKLFGNHN------MQNLAVAKAMCLQLNLSE----AQ 299

Query: 269 EYQKLDAY 292
            Y+ + ++
Sbjct: 300 FYEAIPSF 307