BP916508
Clone id YMU001_000088_D12
Library
Length 440
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000088_D12.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
GGGCGCCCAATGCATGGCAAGGCTAGGGAAGACACAGGATCTCTGTCCGCTGCCATGCAA
GAGGGAGAGAGTGAGTTGGCGGCTGTGGTGAGGTAGAGAGAGATTGTGTGCGCCACAAGG
TAGATCGGCGGCACCATAGAACTACAGGCACCACAGATTTCTGGGTGGTGGGTTTGACGC
CATGCAGACCCAAAGGTTGGTGGAAACTGGTGGTATATGCAGTTGGCGCCGTCATGCAAA
AGATATGGTACGTTGTGAGGGAACTGGCGGCTGAAACTGTGTGTATGTGCGCGGGGTCGT
TATGCAAGTTGGTGGTGGTTGGAGTCAGTGTGTGCGCAACTGTTCTGCAACGACGAGGGG
TAGAGAGAGAAAACGAGAAAGAGAGATGGTGGCACAGAACGTTGCAGTGGGTTGGTGGGT
GGTATACCACCAAAAGGGTG
■■Homology search results ■■ -
sp_hit_id Q1LY77
Definition sp|Q1LY77|SE1BA_DANRE Histone-lysine N-methyltransferase SETD1B-A OS=Danio rerio
Align length 26
Score (bit) 33.1
E-value 0.52
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP916508|Adiantum capillus-veneris mRNA, clone:
YMU001_000088_D12.
(440 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q1LY77|SE1BA_DANRE Histone-lysine N-methyltransferase SETD1B-... 33 0.52
sp|Q4V7F2|CREL1_RAT Cysteine-rich with EGF-like domain protein 1... 32 0.88
sp|P93162|CHLI_SOYBN Magnesium-chelatase subunit chlI, chloropla... 32 1.5
sp|Q5R9W1|MARH6_PONAB E3 ubiquitin-protein ligase MARCH6 OS=Pong... 31 2.0
sp|O60337|MARH6_HUMAN E3 ubiquitin-protein ligase MARCH6 OS=Homo... 31 2.0
sp|Q00939|FOXG1_RAT Forkhead box protein G1 OS=Rattus norvegicus... 31 2.0
sp|Q1A1A4|FOXG1_PIPRU Forkhead box protein G1 OS=Pipistrellus ru... 31 2.0
sp|Q60987|FOXG1_MOUSE Forkhead box protein G1 OS=Mus musculus GN... 31 2.0
sp|Q1A1A3|FOXG1_EPOGA Forkhead box protein G1 OS=Epomophorus gam... 31 2.0
sp|Q55FT4|TSUA_DICDI Probable serine/threonine-protein kinase ts... 31 2.6
sp|Q10M80|SIP21_ORYSJ Aquaporin SIP2-1 OS=Oryza sativa subsp. ja... 30 4.4
sp|Q02817|MUC2_HUMAN Mucin-2 OS=Homo sapiens GN=MUC2 PE=1 SV=2 30 4.4
sp|Q6ZQ89|MARH6_MOUSE E3 ubiquitin-protein ligase MARCH6 OS=Mus ... 30 4.4
sp|Q19857|LRC68_CAEEL Leucine-rich repeat-containing protein 68 ... 30 4.4
sp|P55316|FOXG1_HUMAN Forkhead box protein G1 OS=Homo sapiens GN... 30 4.4
sp|Q1A1A2|FOXG1_EQUBU Forkhead box protein G1 OS=Equus burchelli... 30 4.4
sp|Q1A1A5|FOXG1_CERPY Forkhead box protein G1 OS=Cercopithecus p... 30 4.4
sp|Q1A1A6|FOXG1_CEBCA Forkhead box protein G1 OS=Cebus capucinus... 30 4.4
sp|Q91XD7|CREL1_MOUSE Cysteine-rich with EGF-like domain protein... 30 4.4
sp|Q6BP10|TRM13_DEBHA tRNA guanosine-2'-O-methyltransferase TRM1... 30 5.7
sp|Q9ATM1|SIP21_MAIZE Aquaporin SIP2-1 OS=Zea mays GN=SIP2-1 PE=... 30 5.7
sp|Q6ASC7|EFG1_DESPS Elongation factor G 1 OS=Desulfotalea psych... 30 5.7
sp|O34872|YTIB_BACSU Putative carbonic anhydrase OS=Bacillus sub... 29 7.5
sp|Q9UKY0|PRND_HUMAN Prion-like protein doppel OS=Homo sapiens G... 29 7.5
sp|Q4WHB7|JHD1_ASPFU JmjC domain-containing histone demethylatio... 29 7.5
sp|Q54LC9|FA18B_DICDI Uncharacterized FAM18-like protein 2 OS=Di... 29 7.5
sp|Q9I9K0|FOG1_XENLA Zinc finger protein FOG (Fragment) OS=Xenop... 29 9.8

>sp|Q1LY77|SE1BA_DANRE Histone-lysine N-methyltransferase SETD1B-A
OS=Danio rerio GN=setd1ba PE=1 SV=2
Length = 1844

Score = 33.1 bits (74), Expect = 0.52
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = -3

Query: 318 PPPTCITTPRTYTQFQPPVPSQRTIS 241
PPPT Y+Q+QPP+P + T++
Sbjct: 396 PPPTSANFKTAYSQYQPPIPQEYTVA 421


>sp|Q4V7F2|CREL1_RAT Cysteine-rich with EGF-like domain protein 1
OS=Rattus norvegicus GN=Creld1 PE=2 SV=1
Length = 420

Score = 32.3 bits (72), Expect = 0.88
Identities = 19/57 (33%), Positives = 23/57 (40%)
Frame = -2

Query: 172 PTTQKSVVPVVLWCRRSTLWRTQSLSTSPQPPTHSLPLAWQRTEILCLP*PCHALGA 2
P + +VP +LWC L + P PP HS P A P PCH A
Sbjct: 3 PQPLRGLVPFLLWCLSLFLSLPGPVWLQPSPPPHSAPRA--------EPHPCHTCRA 51


>sp|P93162|CHLI_SOYBN Magnesium-chelatase subunit chlI,
chloroplastic OS=Glycine max GN=CHLI PE=2 SV=1
Length = 421

Score = 31.6 bits (70), Expect = 1.5
Identities = 15/44 (34%), Positives = 24/44 (54%)
Frame = -2

Query: 274 SAASSLTTYHIFCMTAPTAYTTSFHQPLGLHGVKPTTQKSVVPV 143
S++SS + H +T+ Y F+ +G+HG+K Q SV V
Sbjct: 19 SSSSSKPSIHTLSLTSGQNYGRKFYGGIGIHGIKGRAQLSVTNV 62


>sp|Q5R9W1|MARH6_PONAB E3 ubiquitin-protein ligase MARCH6 OS=Pongo
abelii GN=MARCH6 PE=2 SV=1
Length = 910

Score = 31.2 bits (69), Expect = 2.0
Identities = 20/59 (33%), Positives = 29/59 (49%), Gaps = 3/59 (5%)
Frame = +3

Query: 165 VVGLTPCRPKGWWKLV---VYAVGAVMQKIWYVVRELAAETVCMCAGSLCKLVVVGVSV 332
+ +T P+ W K V VYA G + Y+VR+LAA + + SLC V+ V
Sbjct: 773 IAAITLMGPQWWLKTVIEQVYANGIRNIDLHYIVRKLAAPVISVLLLSLCVPYVIASGV 831


>sp|O60337|MARH6_HUMAN E3 ubiquitin-protein ligase MARCH6 OS=Homo
sapiens GN=MARCH6 PE=1 SV=2
Length = 910

Score = 31.2 bits (69), Expect = 2.0
Identities = 20/59 (33%), Positives = 29/59 (49%), Gaps = 3/59 (5%)
Frame = +3

Query: 165 VVGLTPCRPKGWWKLV---VYAVGAVMQKIWYVVRELAAETVCMCAGSLCKLVVVGVSV 332
+ +T P+ W K V VYA G + Y+VR+LAA + + SLC V+ V
Sbjct: 773 IAAITLMGPQWWLKTVIEQVYANGIRNIDLHYIVRKLAAPVISVLLLSLCVPYVIASGV 831


>sp|Q00939|FOXG1_RAT Forkhead box protein G1 OS=Rattus norvegicus
GN=Foxg1 PE=2 SV=1
Length = 480

Score = 31.2 bits (69), Expect = 2.0
Identities = 15/48 (31%), Positives = 22/48 (45%)
Frame = -1

Query: 401 RSVPPSLFLVFSLYPSSLQNSCAHTDSNHHQLA*RPRAHTHSFSRQFP 258
+ +P S F + SL P ++QN H HH + P+ H H P
Sbjct: 11 KMIPKSSFSINSLVPEAVQNDNHHASHGHHN-SHHPQHHHHHHHHHHP 57


>sp|Q1A1A4|FOXG1_PIPRU Forkhead box protein G1 OS=Pipistrellus
rusticus GN=FOXG1 PE=3 SV=1
Length = 484

Score = 31.2 bits (69), Expect = 2.0
Identities = 15/48 (31%), Positives = 22/48 (45%)
Frame = -1

Query: 401 RSVPPSLFLVFSLYPSSLQNSCAHTDSNHHQLA*RPRAHTHSFSRQFP 258
+ +P S F + SL P ++QN H HH + P+ H H P
Sbjct: 11 KMIPKSSFSINSLVPEAVQNDNHHASHGHHN-SHHPQHHHHHHHHHHP 57


>sp|Q60987|FOXG1_MOUSE Forkhead box protein G1 OS=Mus musculus
GN=Foxg1 PE=2 SV=1
Length = 481

Score = 31.2 bits (69), Expect = 2.0
Identities = 15/48 (31%), Positives = 22/48 (45%)
Frame = -1

Query: 401 RSVPPSLFLVFSLYPSSLQNSCAHTDSNHHQLA*RPRAHTHSFSRQFP 258
+ +P S F + SL P ++QN H HH + P+ H H P
Sbjct: 11 KMIPKSSFSINSLVPEAVQNDNHHASHGHHN-SHHPQHHHHHHHHHHP 57


>sp|Q1A1A3|FOXG1_EPOGA Forkhead box protein G1 OS=Epomophorus
gambianus GN=FOXG1 PE=3 SV=1
Length = 485

Score = 31.2 bits (69), Expect = 2.0
Identities = 15/48 (31%), Positives = 22/48 (45%)
Frame = -1

Query: 401 RSVPPSLFLVFSLYPSSLQNSCAHTDSNHHQLA*RPRAHTHSFSRQFP 258
+ +P S F + SL P ++QN H HH + P+ H H P
Sbjct: 11 KMIPKSSFSINSLVPEAVQNDNHHASHGHHN-SHHPQHHHHHHHHHHP 57


>sp|Q55FT4|TSUA_DICDI Probable serine/threonine-protein kinase tsuA
OS=Dictyostelium discoideum GN=tsuA PE=1 SV=1
Length = 2247

Score = 30.8 bits (68), Expect = 2.6
Identities = 13/23 (56%), Positives = 15/23 (65%)
Frame = -3

Query: 315 PPTCITTPRTYTQFQPPVPSQRT 247
PPT IT P+T T F+P P RT
Sbjct: 901 PPTPITRPQTPTSFRPQTPQYRT 923


tr_hit_id B5E0L7
Definition tr|B5E0L7|B5E0L7_DROPS GA24382 OS=Drosophila pseudoobscura pseudoobscura
Align length 98
Score (bit) 34.7
E-value 2.4
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP916508|Adiantum capillus-veneris mRNA, clone:
YMU001_000088_D12.
(440 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|B5E0L7|B5E0L7_DROPS GA24382 OS=Drosophila pseudoobscura pseud... 35 2.4
tr|B4GC05|B4GC05_DROPE GL10480 OS=Drosophila persimilis GN=GL104... 35 2.4
tr|Q4RWU3|Q4RWU3_TETNG Chromosome 15 SCAF14981, whole genome sho... 34 3.2
tr|A9PF22|A9PF22_POPTR Putative uncharacterized protein OS=Popul... 34 3.2
tr|B4PSC1|B4PSC1_DROYA GE10609 OS=Drosophila yakuba GN=GE10609 P... 34 3.2
tr|A4H3P4|A4H3P4_LEIBR Putative uncharacterized protein OS=Leish... 34 3.2
tr|A8P0H6|A8P0H6_COPC7 Putative uncharacterized protein OS=Copri... 34 3.2
tr|A5DTW7|A5DTW7_LODEL Putative uncharacterized protein OS=Lodde... 34 3.2
tr|Q6H801|Q6H801_ORYSJ Putative uncharacterized protein OJ1297_C... 34 4.1
tr|A9AMR4|A9AMR4_BURM1 Major facilitator superfamily MFS_1 OS=Bu... 33 5.4
tr|B3D666|B3D666_BURM1 Permease of the major facilitator superfa... 33 5.4
tr|B6L041|B6L041_BRAFL Putative uncharacterized protein (Fragmen... 33 5.4
tr|B6AHS2|B6AHS2_9CRYT Putative uncharacterized protein (Fragmen... 33 5.4
tr|B4II47|B4II47_DROSE GM16539 OS=Drosophila sechellia GN=GM1653... 33 7.0
tr|A8NWB9|A8NWB9_BRUMA Putative uncharacterized protein (Fragmen... 33 7.0
tr|A9WQ76|A9WQ76_RENSM Membrane alanine aminopeptidase OS=Reniba... 33 9.2
tr|Q9FR36|Q9FR36_SOYBN Putative steroid reductase OS=Glycine max... 33 9.2
tr|B6UWI4|B6UWI4_DROYA Meiotic 218 (Fragment) OS=Drosophila yaku... 33 9.2
tr|Q0U2N2|Q0U2N2_PHANO Putative uncharacterized protein OS=Phaeo... 33 9.2

>tr|B5E0L7|B5E0L7_DROPS GA24382 OS=Drosophila pseudoobscura
pseudoobscura GN=GA24382 PE=4 SV=1
Length = 2089

Score = 34.7 bits (78), Expect = 2.4
Identities = 36/98 (36%), Positives = 43/98 (43%), Gaps = 3/98 (3%)
Frame = -1

Query: 290 AHTHSFSRQFPHNVPYLLHDGANCIYHQFPPTFGSAWRQTHH---PEICGACSSMVPPIY 120
AH HS + PH P H A+ HQ PP SA H P G+ SS P
Sbjct: 1654 AHPHSLNLSHPHMSP---HHPASMAAHQLPPHTSSAGGGVHSNSIPVTAGSSSSASSP-- 1708

Query: 119 LVAHTISLYLTTAANSLSPSCMAADRDPVSSLALPCIG 6
H+ SL L TAA LS AA P SS+++ G
Sbjct: 1709 ---HS-SLNL-TAAVKLSSEQQAATSTP-SSISISSSG 1740


>tr|B4GC05|B4GC05_DROPE GL10480 OS=Drosophila persimilis GN=GL10480
PE=4 SV=1
Length = 801

Score = 34.7 bits (78), Expect = 2.4
Identities = 36/98 (36%), Positives = 43/98 (43%), Gaps = 3/98 (3%)
Frame = -1

Query: 290 AHTHSFSRQFPHNVPYLLHDGANCIYHQFPPTFGSAWRQTHH---PEICGACSSMVPPIY 120
AH HS + PH P H A+ HQ PP SA H P G+ SS P
Sbjct: 356 AHPHSLNLSHPHMSP---HHPASMAAHQLPPHTSSAGGGVHSNSIPVTAGSSSSASSP-- 410

Query: 119 LVAHTISLYLTTAANSLSPSCMAADRDPVSSLALPCIG 6
H+ SL L TAA LS AA P SS+++ G
Sbjct: 411 ---HS-SLNL-TAAVKLSSDQQAATSTP-SSISISSSG 442


>tr|Q4RWU3|Q4RWU3_TETNG Chromosome 15 SCAF14981, whole genome
shotgun sequence. (Fragment) OS=Tetraodon nigroviridis
GN=GSTENG00027690001 PE=4 SV=1
Length = 1358

Score = 34.3 bits (77), Expect = 3.2
Identities = 21/61 (34%), Positives = 29/61 (47%)
Frame = -1

Query: 425 IPPTNPLQRSVPPSLFLVFSLYPSSLQNSCAHTDSNHHQLA*RPRAHTHSFSRQFPHNVP 246
+P N L S+P S S YP QN C+ T S ++HTHS ++ +VP
Sbjct: 812 LPKANTLSTSMPTS-----SYYPDESQNMCSDTSS-------LVQSHTHSLRKREAVDVP 859

Query: 245 Y 243
Y
Sbjct: 860 Y 860


>tr|A9PF22|A9PF22_POPTR Putative uncharacterized protein OS=Populus
trichocarpa PE=2 SV=1
Length = 332

Score = 34.3 bits (77), Expect = 3.2
Identities = 28/91 (30%), Positives = 37/91 (40%), Gaps = 3/91 (3%)
Frame = -1

Query: 320 NHHQLA*RPRAHTHSFSRQFPHNVPYLLHDGANCIYHQFPPTFGSAWRQTHHPEICGAC- 144
+HH L + H H F+ PHNV H+ N I P A H C C
Sbjct: 21 HHHNL----QHHLHQFASSKPHNVNN-NHNNGNTIVVGGPTAIAPA-TSVHELLECPVCT 74

Query: 143 SSMVPPIYLV--AHTISLYLTTAANSLSPSC 57
+SM PPI+ HT+ T + P+C
Sbjct: 75 NSMYPPIHQCHNGHTLCSTCKTRVQNRCPTC 105


>tr|B4PSC1|B4PSC1_DROYA GE10609 OS=Drosophila yakuba GN=GE10609 PE=4
SV=1
Length = 473

Score = 34.3 bits (77), Expect = 3.2
Identities = 19/57 (33%), Positives = 23/57 (40%)
Frame = -3

Query: 321 QPPPTCITTPRTYTQFQPPVPSQRTISFA*RRQLHIPPVSTNLWVCMASNPPPRNLW 151
QPPP P Y + PP P ++ H PP N W PPP+N W
Sbjct: 263 QPPPPISAPPPNYNYWGPPPPPMQSY------YQHPPPPQMNGW---GPYPPPQNGW 310


>tr|A4H3P4|A4H3P4_LEIBR Putative uncharacterized protein
OS=Leishmania braziliensis GN=LbrM03_V2.0730 PE=4 SV=1
Length = 2870

Score = 34.3 bits (77), Expect = 3.2
Identities = 21/72 (29%), Positives = 34/72 (47%), Gaps = 1/72 (1%)
Frame = -2

Query: 271 AASSLTTYHIFCMTAPTAYTTSFHQPLGLHGVKPTTQKSVVPVVLWC-RRSTLWRTQSLS 95
+++S + +++ TA TA + S + P+ S+ P C +RS T
Sbjct: 78 SSASASAHYLTTTTAATARSRSPRNSAAVRSAAPSPSTSLAPPRRQCLQRSRTATTAESR 137

Query: 94 TSPQPPTHSLPL 59
T+P PPT LPL
Sbjct: 138 TTPSPPTSVLPL 149


>tr|A8P0H6|A8P0H6_COPC7 Putative uncharacterized protein
OS=Coprinopsis cinerea (strain Okayama-7 / 130 / FGSC
9003) GN=CC1G_10312 PE=4 SV=1
Length = 442

Score = 34.3 bits (77), Expect = 3.2
Identities = 17/43 (39%), Positives = 23/43 (53%)
Frame = -3

Query: 324 LQPPPTCITTPRTYTQFQPPVPSQRTISFA*RRQLHIPPVSTN 196
L P P+ ++ P T TQF P PSQ+ +S H P + TN
Sbjct: 299 LSPSPSIMSAPVTQTQFMTPSPSQQLLS-------HSPQIQTN 334


>tr|A5DTW7|A5DTW7_LODEL Putative uncharacterized protein
OS=Lodderomyces elongisporus GN=LELG_00803 PE=4 SV=1
Length = 844

Score = 34.3 bits (77), Expect = 3.2
Identities = 31/128 (24%), Positives = 54/128 (42%), Gaps = 2/128 (1%)
Frame = -1

Query: 401 RSVPPSLFLVFSLYPSSLQNSCAHTDSNHHQLA*RPRAHTHSFSRQFPHNVPYLLHDGAN 222
+ +PPS L+ + QNS + S H+ ++T + S H+ +L H G+
Sbjct: 163 QQIPPSAQLLAISNTTQTQNSLNYLPSTHNTPTAVSNSYTSNHSHASVHSSSFLPHAGS- 221

Query: 221 CIYHQFPP--TFGSAWRQTHHPEICGACSSMVPPIYLVAHTISLYLTTAANSLSPSCMAA 48
Y + PP +FGS++R P T ++Y T +S S
Sbjct: 222 --YSEHPPNSSFGSSFRPKTLPR--------------AFPTTNVYTDTVTSSRSSQPTTL 265

Query: 47 DRDPVSSL 24
+++ VS+L
Sbjct: 266 NQEHVSNL 273


>tr|Q6H801|Q6H801_ORYSJ Putative uncharacterized protein
OJ1297_C09.30 OS=Oryza sativa subsp. japonica
GN=OJ1297_C09.30 PE=4 SV=1
Length = 402

Score = 33.9 bits (76), Expect = 4.1
Identities = 29/104 (27%), Positives = 42/104 (40%), Gaps = 12/104 (11%)
Frame = -2

Query: 283 HTVSAASSLTTYHIFCMTAPTAYTTSFHQP------LGLHGVK------PTTQKSVVPVV 140
H + T++IFC PT T++ +P + HG+K P T P +
Sbjct: 273 HVGGGGAHQPTFNIFCRR-PTRATSTRSRPTRATSTISAHGMKAAPLATPVTSGPTAPPL 331

Query: 139 LWCRRSTLWRTQSLSTSPQPPTHSLPLAWQRTEILCLP*PCHAL 8
CRRS R + +P P+ S A +L P P H L
Sbjct: 332 AACRRSARGRRRHCPPAPPLPSSSRAAA----TVLLAPPPRHRL 371


>tr|A9AMR4|A9AMR4_BURM1 Major facilitator superfamily MFS_1
OS=Burkholderia multivorans (strain ATCC 17616 / 249)
GN=Bmul_4703 PE=4 SV=1
Length = 474

Score = 33.5 bits (75), Expect = 5.4
Identities = 18/49 (36%), Positives = 26/49 (53%)
Frame = +3

Query: 195 GWWKLVVYAVGAVMQKIWYVVRELAAETVCMCAGSLCKLVVVGVSVCAT 341
GW + YA+GAV+ W V AA + AG+ L V V++CA+
Sbjct: 320 GWLTAIPYAIGAVVMLWWARVANRAASRIPYVAGA---LAVAAVALCAS 365