BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP916510|Adiantum capillus-veneris mRNA, clone:
YMU001_000088_E02.
         (465 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|A9IMR9|PNP_BART1 Polyribonucleotide nucleotidyltransferase OS...    30   3.9  
sp|Q6G5F8|PNP_BARHE Polyribonucleotide nucleotidyltransferase OS...    30   3.9  
sp|Q0WRC9|FB218_ARATH F-box protein At4g02740 OS=Arabidopsis tha...    30   3.9  
sp|Q036B8|ADD_LACC3 Adenosine deaminase OS=Lactobacillus casei (...    30   5.2  
sp|Q5YZ59|LIPA_NOCFA Lipoyl synthase OS=Nocardia farcinica GN=li...    30   6.7  
sp|Q8NNB4|DNAJ1_CORGL Chaperone protein dnaJ 1 OS=Corynebacteriu...    30   6.8  

>sp|A9IMR9|PNP_BART1 Polyribonucleotide nucleotidyltransferase
           OS=Bartonella tribocorum (strain CIP 105476 / IBS 506)
           GN=pnp PE=3 SV=1
          Length = 731

 Score = 30.4 bits (67), Expect = 3.9
 Identities = 25/92 (27%), Positives = 38/92 (41%)
 Frame = -3

Query: 439 KDHKIETIWVGVSPVSCNKLQLNKVIDFCNPTITLRAFC*RRKFLKTVQETHFSKFTSVI 260
           K HKIE  W G  P++   L+  K+    +  +           + T  ET       ++
Sbjct: 3   KTHKIEIEWAG-RPLT---LETGKIARQADGAV-----------IATYGET-------IV 40

Query: 259 FTLIMSMNSPRKPYKIFPMTNNYNEDSRRRGR 164
              ++S  SP+     FP+T NY E S   GR
Sbjct: 41  LATVVSAKSPKPDQDFFPLTVNYQEKSYAVGR 72


>sp|Q6G5F8|PNP_BARHE Polyribonucleotide nucleotidyltransferase
           OS=Bartonella henselae GN=pnp PE=3 SV=1
          Length = 733

 Score = 30.4 bits (67), Expect = 3.9
 Identities = 25/92 (27%), Positives = 38/92 (41%)
 Frame = -3

Query: 439 KDHKIETIWVGVSPVSCNKLQLNKVIDFCNPTITLRAFC*RRKFLKTVQETHFSKFTSVI 260
           K HKIE  W G  P++   L+  K+    +  +           + T  ET       ++
Sbjct: 3   KTHKIEIEWAG-RPLT---LETGKIARQADGAV-----------IATYGET-------IV 40

Query: 259 FTLIMSMNSPRKPYKIFPMTNNYNEDSRRRGR 164
              ++S  SP+     FP+T NY E S   GR
Sbjct: 41  LATVVSAKSPKPDQDFFPLTVNYQEKSYAVGR 72


>sp|Q0WRC9|FB218_ARATH F-box protein At4g02740 OS=Arabidopsis
           thaliana GN=At4g02740 PE=1 SV=1
          Length = 479

 Score = 30.4 bits (67), Expect = 3.9
 Identities = 14/36 (38%), Positives = 24/36 (66%)
 Frame = -3

Query: 445 SCKDHKIETIWVGVSPVSCNKLQLNKVIDFCNPTIT 338
           SCK++ ++T+ +     SC KLQ  +V++FCN  +T
Sbjct: 334 SCKENLLKTLILR----SCPKLQEKEVLEFCNSLLT 365


>sp|Q036B8|ADD_LACC3 Adenosine deaminase OS=Lactobacillus casei
           (strain ATCC 334) GN=add PE=3 SV=1
          Length = 339

 Score = 30.0 bits (66), Expect = 5.2
 Identities = 19/43 (44%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
 Frame = -1

Query: 180 AGAGAD-QTCRCAPAIMEEQHLCTSLAIDRGCCHLSDNEGSAI 55
           AG  AD  T  CAPAI   Q L   L    G CH   N G A+
Sbjct: 171 AGNEADFPTNVCAPAIKTAQSLGVPLTFHAGECHCPQNIGEAV 213


>sp|Q5YZ59|LIPA_NOCFA Lipoyl synthase OS=Nocardia farcinica GN=lipA
           PE=3 SV=1
          Length = 352

 Score = 29.6 bits (65), Expect = 6.7
 Identities = 13/54 (24%), Positives = 28/54 (51%)
 Frame = +3

Query: 303 LRNFLRQQNALKVIVGLQKSMTLLSCNLLHDTGDTPTQIVSILWSLHD*GLVVL 464
           +R   R + +L V+   +++  +   NL+   G+TP ++   +  LH+ G  +L
Sbjct: 207 IRPAFRYERSLSVLTAAREAGLVTKSNLILGMGETPEEVTEAMRDLHEAGCDIL 260


>sp|Q8NNB4|DNAJ1_CORGL Chaperone protein dnaJ 1 OS=Corynebacterium
           glutamicum GN=dnaJ1 PE=3 SV=1
          Length = 382

 Score = 29.6 bits (65), Expect = 6.8
 Identities = 19/62 (30%), Positives = 24/62 (38%), Gaps = 6/62 (9%)
 Frame = -1

Query: 201 LITTMRTAGAGADQ------TCRCAPAIMEEQHLCTSLAIDRGCCHLSDNEGSAIIDVCT 40
           L T    +G+ +D+      TC  A  I E Q       +    CH  D  G  I D CT
Sbjct: 146 LCTKCHGSGSASDKKPVTCGTCNGAGEIQEVQRSFLGNVMTSRPCHTCDGTGEIIPDPCT 205

Query: 39  PC 34
            C
Sbjct: 206 EC 207

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP916510|Adiantum capillus-veneris mRNA, clone:
YMU001_000088_E02.
         (465 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q8IKD0|Q8IKD0_PLAF7 Reticulocyte binding protein 2 homolog B,...    35   1.8  
tr|Q0SHK5|Q0SHK5_RHOSR Lipoyl synthase OS=Rhodococcus sp. (strai...    33   7.0  
tr|A5IAZ8|A5IAZ8_LEGPC Putative uncharacterized protein OS=Legio...    33   9.1  

>tr|Q8IKD0|Q8IKD0_PLAF7 Reticulocyte binding protein 2 homolog B,
            putative OS=Plasmodium falciparum (isolate 3D7)
            GN=PF14_0675 PE=4 SV=1
          Length = 1095

 Score = 35.0 bits (79), Expect = 1.8
 Identities = 17/50 (34%), Positives = 27/50 (54%)
 Frame = -2

Query: 350  PYDYLESILLTKKIPQDCSGDSFL*IYISHLHSDHVHEQSQKTLQNFSND 201
            P DY++ ++L KK  +    D    IYI    + H++E S K ++ FS D
Sbjct: 940  PIDYIKELILKKKFSKHKDNDKIGIIYILAEETIHLYENSAKDVEPFSED 989


>tr|Q0SHK5|Q0SHK5_RHOSR Lipoyl synthase OS=Rhodococcus sp. (strain
           RHA1) GN=RHA1_ro01154 PE=4 SV=1
          Length = 346

 Score = 33.1 bits (74), Expect = 7.0
 Identities = 16/54 (29%), Positives = 27/54 (50%)
 Frame = +3

Query: 303 LRNFLRQQNALKVIVGLQKSMTLLSCNLLHDTGDTPTQIVSILWSLHD*GLVVL 464
           +R   R Q +L VI   ++   +   NL+   G+TP ++   L  LHD G  ++
Sbjct: 201 IRPAFRYQRSLDVITAAREDNLVTKSNLILGMGETPDEVTQALHDLHDAGCDII 254


>tr|A5IAZ8|A5IAZ8_LEGPC Putative uncharacterized protein
           OS=Legionella pneumophila (strain Corby) GN=LPC_0564
           PE=4 SV=1
          Length = 388

 Score = 32.7 bits (73), Expect = 9.1
 Identities = 41/125 (32%), Positives = 54/125 (43%), Gaps = 19/125 (15%)
 Frame = -2

Query: 422 NNLGGCISSIMQ*IT------TQQGHRLLQPYD----YLESILLTKKIPQDCSGDSFL*I 273
           NNL   I+ IM+ I       TQ  ++L+Q       +LES LL  KIP++   D F  +
Sbjct: 123 NNLSAPINQIMKAILGNVPVLTQLPNQLMQAISQSGVFLESKLLKGKIPREIQSD-FKGL 181

Query: 272 YISHLHSDHVHEQSQKTLQNFSND**LQ*GQQAPGPTKPAVVLQPLWKSSIF-------- 117
               LHS     +    L N      L   QQAP P  P  + QPL K +I         
Sbjct: 182 CFKLLHSLGTDSKLPINLPNELESGFL---QQAPLPL-PGAIPQPLTKDTILNLIGLSAE 237

Query: 116 -VHHL 105
            VHH+
Sbjct: 238 AVHHI 242