BP916514
Clone id YMU001_000088_E07
Library
Length 435
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000088_E07.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
AATAGAAAAACCATATGCAACGTTTCCCACTATGGATGGCAGGACGAAAACTACAGCAAG
CAGGATGAAAACAAAATCGTTCATCCTCTTGCAATGATACTTTCACCAAACACACAAATT
AATCCTCTCATCGCTTGAACATGCTGTGCAAACTCAAGGAAGCTTTGTGTGTTGTGTGAC
CTGTGAGCCCAATCAGATCCACAAGATTCACTCTGCCATCTAAAAGGCACTATGCAAGTA
TCCCAACATCATGTTTTGTAGACAGAAATTCCACTCTAAACTACTCTCTCCTCCAGGGGA
GGCATTTACAATCTCACAGAAAAATCCTGTTATGTTCGTCTCGTTGCCCCACAGTGTTTG
TGTTGAGCTTTGGACTCTCTGGAAGTGTGCGAGGAATTCAATGTGGCTCAAGTAAATGAG
TCTTTATTGCCTTCT
■■Homology search results ■■ -
sp_hit_id Q54C31
Definition sp|Q54C31|PSIR_DICDI Protein psiR OS=Dictyostelium discoideum
Align length 51
Score (bit) 32.3
E-value 0.86
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP916514|Adiantum capillus-veneris mRNA, clone:
YMU001_000088_E07.
(435 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q54C31|PSIR_DICDI Protein psiR OS=Dictyostelium discoideum GN... 32 0.86
sp|Q8SXQ7|PGPLF_DROME Peptidoglycan-recognition protein-LF OS=Dr... 31 2.5
sp|Q9R1M5|NALP5_MOUSE NACHT, LRR and PYD domains-containing prot... 29 7.3
sp|Q5RCP1|CI097_PONAB Uncharacterized protein C9orf97 homolog OS... 29 9.6
sp|A1USU3|SYR_BARBK Arginyl-tRNA synthetase OS=Bartonella bacill... 29 9.8

>sp|Q54C31|PSIR_DICDI Protein psiR OS=Dictyostelium discoideum GN=psiR
PE=3 SV=1
Length = 996

Score = 32.3 bits (72), Expect = 0.86
Identities = 17/51 (33%), Positives = 25/51 (49%)
Frame = +2

Query: 125 LSSLEHAVQTQGSFVCCVTCEPNQIHKIHSAI*KALCKYPNIMFCRQKFHS 277
L L+ + QG F C + PN I HS ++ CK+ + C+ K HS
Sbjct: 947 LDCLDLHCERQGDFTCFMVKNPNFISSKHSCYGESCCKFTPV--CKPKGHS 995


>sp|Q8SXQ7|PGPLF_DROME Peptidoglycan-recognition protein-LF
OS=Drosophila melanogaster GN=PGRP-LF PE=1 SV=1
Length = 369

Score = 30.8 bits (68), Expect = 2.5
Identities = 14/46 (30%), Positives = 22/46 (47%)
Frame = +3

Query: 180 PVSPIRSTRFTLPSKRHYASIPTSCFVDRNSTLNYSLLQGRHLQSH 317
P+ P+ + + S R A+ SCF T LLQ H++S+
Sbjct: 247 PIVPLTPLKLPIESVRFVATNTPSCFTQAECTFRVRLLQNWHIESN 292


>sp|Q9R1M5|NALP5_MOUSE NACHT, LRR and PYD domains-containing protein
5 OS=Mus musculus GN=Nlrp5 PE=1 SV=2
Length = 1163

Score = 29.3 bits (64), Expect = 7.3
Identities = 19/77 (24%), Positives = 31/77 (40%)
Frame = +2

Query: 149 QTQGSFVCCVTCEPNQIHKIHSAI*KALCKYPNIMFCRQKFHSKLLSPPGEAFTISQKNP 328
Q Q VC + CE Q+ K C+ ++ FH L P ++ +SQ+
Sbjct: 430 QCQAPSVCSLVCEALQLQKKLGKRCTLPCQTLTGLYATLVFHQLTLKRPSQS-ALSQEEQ 488

Query: 329 VMFVSLPHSVCVELWTL 379
+ V L +WT+
Sbjct: 489 ITLVGLCMMAAEGVWTM 505


>sp|Q5RCP1|CI097_PONAB Uncharacterized protein C9orf97 homolog
OS=Pongo abelii PE=2 SV=1
Length = 516

Score = 28.9 bits (63), Expect = 9.6
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = +2

Query: 107 QTHKLILSSLEHAVQTQGSFVCCVTCEPNQIHKI 208
Q H+L+L+ A Q QG CCVTC+ K+
Sbjct: 436 QCHQLVLTC--PACQGQGFTACCVTCQDKGSRKV 467


>sp|A1USU3|SYR_BARBK Arginyl-tRNA synthetase OS=Bartonella
bacilliformis (strain ATCC 35685 / KC583) GN=argS PE=3
SV=1
Length = 585

Score = 28.9 bits (63), Expect = 9.8
Identities = 14/56 (25%), Positives = 29/56 (51%), Gaps = 4/56 (7%)
Frame = -1

Query: 420 LIYLSHIEFLAHFQRVQSSTQTLWGNETNITGFFCEIV----NASPGGESSLEWNF 265
+IY+ + + +R+++ + + GN+ +T F C++V N P S E +F
Sbjct: 352 MIYVLGADHAGYVKRLEAVAKAISGNKAKLTAFLCQLVKLFRNGHPVRMSKREGSF 407


tr_hit_id B4PEZ6
Definition tr|B4PEZ6|B4PEZ6_DROYA GE20821 OS=Drosophila yakuba
Align length 46
Score (bit) 33.9
E-value 4.2
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP916514|Adiantum capillus-veneris mRNA, clone:
YMU001_000088_E07.
(435 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|B4PEZ6|B4PEZ6_DROYA GE20821 OS=Drosophila yakuba GN=GE20821 P... 34 4.2
tr|Q16UP6|Q16UP6_AEDAE Putative uncharacterized protein (Fragmen... 33 7.1
tr|A5K8W5|A5K8W5_PLAVI Putative uncharacterized protein OS=Plasm... 26 8.8

>tr|B4PEZ6|B4PEZ6_DROYA GE20821 OS=Drosophila yakuba GN=GE20821 PE=4
SV=1
Length = 370

Score = 33.9 bits (76), Expect = 4.2
Identities = 15/46 (32%), Positives = 23/46 (50%)
Frame = +3

Query: 180 PVSPIRSTRFTLPSKRHYASIPTSCFVDRNSTLNYSLLQGRHLQSH 317
P+ P+ + + S R A+ TSC T LLQ RH++S+
Sbjct: 248 PIGPLTPLKLPIESVRFVATNTTSCSTQAECTFRVRLLQNRHIESN 293


>tr|Q16UP6|Q16UP6_AEDAE Putative uncharacterized protein (Fragment)
OS=Aedes aegypti GN=AAEL009841 PE=4 SV=1
Length = 200

Score = 33.1 bits (74), Expect = 7.1
Identities = 21/68 (30%), Positives = 35/68 (51%), Gaps = 3/68 (4%)
Frame = +3

Query: 186 SPIRSTRFTLPSKRHYASIPTSCFVDRNSTLNYSLLQGRH---LQSHRKILLCSSRCPTV 356
S + TR TL +Y +P+ ++++ +L G H +Q+ ++LCSSR V
Sbjct: 63 SRLMLTRATLRDSGNYTCVPSGAI---SASVQVHVLNGEHPAAMQTSNGVVLCSSRYVLV 119

Query: 357 FVLSFGLS 380
FVL L+
Sbjct: 120 FVLLAALN 127


>tr|A5K8W5|A5K8W5_PLAVI Putative uncharacterized protein
OS=Plasmodium vivax GN=PVX_101210 PE=4 SV=1
Length = 954

Score = 26.2 bits (56), Expect(2) = 8.8
Identities = 10/48 (20%), Positives = 24/48 (50%)
Frame = +1

Query: 37 WQDENYSKQDENKIVHPLAMILSPNTQINPLIA*TCCANSRKLCVLCD 180
W +EN++ + K++H + + ++A +C N+ +C + D
Sbjct: 852 WNNENFNIYKKEKVIHK-----ADSVDTEQIVAISCLGNALSVCYIED 894



Score = 25.4 bits (54), Expect(2) = 8.8
Identities = 12/38 (31%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = +3

Query: 246 TSCFVDRNSTL-NYSLLQGRHLQSHRKILLCSSRCPTV 356
+ C+ D S L NY +L G + ++ ++C S PT+
Sbjct: 899 SGCYADNASALDNYFVLVGIEVLKNKLKIICKSNNPTL 936