BP916520
Clone id YMU001_000088_F01
Library
Length 522
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000088_F01.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
CCTCGCGTGACCATAGCCTTTATTGGCTGAAGGCAGTTCCCTGCTGCATATCTTCGACAA
AAGAACAGGATTGGTTCCTGCTCATTGCAGGTCATTCTTCTTGTTCATCTTGGAGTATCA
TCCTCCACTCCTAATTGAGAGGGCCCTCCATCCAATCTGGACAGCCTAACGCGGTGTCCT
CATATAGTTACACATTTTCCAGCATCCTTTCCAAACATGAACAGGAACAGGAAGGGAAGC
CACTCTCTTTATGTAATGCATTCCATCGTTCCAAGAAGAACAGCGCTGCACGACAGCTTG
CTAACTATCTCAACCGAGGCTTCATTCAACCAAGCTCTTCACCATGGGCATCCCTTATTC
TCTTGGTGACTATGAAATGGTATGGAATACTAGTGTCAGTCTTGAAACATTGTTCCGGAT
GCAGAAGCTAACATCAGACACAAATTAGTTCCATTTCTTCATGAGATGTGGGCACCAGCC
TGAATGCTCAACATCTATGCGTAGGCAAAAGCATCTTTTTCA
■■Homology search results ■■ -
sp_hit_id A3KGW5
Definition sp|A3KGW5|GT253_MOUSE Glycosyltransferase 25 family member 3 OS=Mus musculus
Align length 53
Score (bit) 32.0
E-value 1.8
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP916520|Adiantum capillus-veneris mRNA, clone:
YMU001_000088_F01.
(522 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|A3KGW5|GT253_MOUSE Glycosyltransferase 25 family member 3 OS=... 32 1.8
sp|Q6PDN3|MYLK_MOUSE Myosin light chain kinase, smooth muscle OS... 31 4.1
sp|Q5U309|GT253_RAT Glycosyltransferase 25 family member 3 OS=Ra... 30 9.1

>sp|A3KGW5|GT253_MOUSE Glycosyltransferase 25 family member 3 OS=Mus
musculus GN=Cercam PE=2 SV=1
Length = 592

Score = 32.0 bits (71), Expect = 1.8
Identities = 17/53 (32%), Positives = 26/53 (49%)
Frame = +1

Query: 208 FPNMNRNRKGSHSLYVMHSIVPRRTALHDSLLTISTEASFNQALHHGHPLFSW 366
FP NR R+G + ++HS LL++ TE + A + HP +SW
Sbjct: 194 FPTKNRQRQGCFRVPMVHSTF---------LLSLQTEETARLAFYPPHPNYSW 237


>sp|Q6PDN3|MYLK_MOUSE Myosin light chain kinase, smooth muscle
OS=Mus musculus GN=Mylk PE=1 SV=3
Length = 1941

Score = 30.8 bits (68), Expect = 4.1
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = +1

Query: 61 KNRIGSCSLQVILLVHLGVSSSTPN*EGPPS 153
KNR+G CS QV L++H S + P P S
Sbjct: 785 KNRVGECSCQVSLMLHNSPSRAPPRGREPAS 815


>sp|Q5U309|GT253_RAT Glycosyltransferase 25 family member 3
OS=Rattus norvegicus GN=Cercam PE=2 SV=2
Length = 572

Score = 29.6 bits (65), Expect = 9.1
Identities = 15/53 (28%), Positives = 26/53 (49%)
Frame = +1

Query: 208 FPNMNRNRKGSHSLYVMHSIVPRRTALHDSLLTISTEASFNQALHHGHPLFSW 366
FP NR R+G + ++HS L+++ TE + A + HP ++W
Sbjct: 174 FPTKNRQRQGCFRVPMVHSTF---------LVSLQTEETARLAFYPPHPNYTW 217


tr_hit_id Q2R264
Definition tr|Q2R264|Q2R264_ORYSJ Retrotransposon protein, putative, unclassified OS=Oryza sativa subsp. japonica
Align length 50
Score (bit) 43.5
E-value 0.006
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP916520|Adiantum capillus-veneris mRNA, clone:
YMU001_000088_F01.
(522 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q2R264|Q2R264_ORYSJ Retrotransposon protein, putative, unclas... 44 0.006
tr|Q2QPU3|Q2QPU3_ORYSJ Retrotransposon protein, putative, unclas... 40 0.069
tr|Q0J6A2|Q0J6A2_ORYSJ Os08g0344700 protein OS=Oryza sativa subs... 39 0.20
tr|Q7XMS3|Q7XMS3_ORYSA OSJNBa0029L02.14 protein OS=Oryza sativa ... 38 0.34
tr|Q9AUY8|Q9AUY8_ARATH Putative uncharacterized protein T32O22.1... 37 0.45
tr|Q7XQR2|Q7XQR2_ORYSA OSJNBa0091D06.2 protein OS=Oryza sativa G... 37 0.59
tr|Q2R3G0|Q2R3G0_ORYSJ Retrotransposon protein, putative, unclas... 37 0.59
tr|Q01JG0|Q01JG0_ORYSA H0502G05.6 protein OS=Oryza sativa GN=H05... 37 0.59
tr|A5BZW2|A5BZW2_VITVI Putative uncharacterized protein OS=Vitis... 37 0.59
tr|Q7XP03|Q7XP03_ORYSJ OSJNBb0013J13.17 protein OS=Oryza sativa ... 37 0.77
tr|Q2R3P5|Q2R3P5_ORYSJ Retrotransposon protein, putative, Ty3-gy... 37 0.77
tr|Q2QRQ5|Q2QRQ5_ORYSJ Retrotransposon protein, putative, Ty3-gy... 37 0.77
tr|A5BRM2|A5BRM2_VITVI Putative uncharacterized protein OS=Vitis... 37 0.77
tr|Q9SK57|Q9SK57_ARATH Putative retroelement pol polyprotein OS=... 36 1.00
tr|Q7XW39|Q7XW39_ORYSJ OSJNBb0062H02.17 protein (OSJNBa0054D14.1... 36 1.00
tr|Q7Y006|Q7Y006_ORYSJ Putative polyprotein (Retrotransposon pro... 36 1.3
tr|Q7XLJ7|Q7XLJ7_ORYSA OSJNBa0009K15.13 protein OS=Oryza sativa ... 36 1.3
tr|Q8W1D1|Q8W1D1_MAIZE Gag-pol OS=Zea mays PE=4 SV=1 35 1.7
tr|Q8W151|Q8W151_ORYSJ Polyprotein OS=Oryza sativa subsp. japoni... 35 1.7
tr|Q7XQY0|Q7XQY0_ORYSJ OSJNBb0108J11.11 protein OS=Oryza sativa ... 35 1.7
tr|Q7XPW2|Q7XPW2_ORYSJ OSJNBa0032F06.19 protein OS=Oryza sativa ... 35 1.7
tr|Q5W703|Q5W703_ORYSJ Putative polyprotein OS=Oryza sativa subs... 35 1.7
tr|Q259G0|Q259G0_ORYSA H0124B04.16 protein OS=Oryza sativa GN=H0... 35 1.7
tr|A5AXA5|A5AXA5_VITVI Putative uncharacterized protein OS=Vitis... 35 1.7
tr|Q9XE44|Q9XE44_ARATH Putative retroelement pol polyprotein OS=... 35 2.2
tr|Q9T0B7|Q9T0B7_ARATH Putative reverse-transcriptase-like prote... 35 2.2
tr|Q9SJ92|Q9SJ92_ARATH Putative retroelement pol polyprotein OS=... 35 2.2
tr|Q2R2N6|Q2R2N6_ORYSJ Retrotransposon protein, putative, unclas... 35 2.2
tr|Q2R0G6|Q2R0G6_ORYSJ Retrotransposon protein, putative, Ty3-gy... 35 2.2
tr|Q2R099|Q2R099_ORYSJ Retrotransposon protein, putative, Ty3-gy... 35 2.2

>tr|Q2R264|Q2R264_ORYSJ Retrotransposon protein, putative,
unclassified OS=Oryza sativa subsp. japonica
GN=LOC_Os11g36860 PE=4 SV=1
Length = 940

Score = 43.5 bits (101), Expect = 0.006
Identities = 22/50 (44%), Positives = 34/50 (68%), Gaps = 1/50 (2%)
Frame = +3

Query: 231 EGKPLSLCN-AFHRSKKNSAARQLANYLNRGFIQPSSSPWASLILLVTMK 377
E KP++LC ++ ++K+ RQ+A L +G IQPS SP++S +LLV K
Sbjct: 604 EAKPVNLCRYRYNLAQKDEIERQVAEMLQQGVIQPSVSPFSSPVLLVQKK 653


>tr|Q2QPU3|Q2QPU3_ORYSJ Retrotransposon protein, putative,
unclassified OS=Oryza sativa subsp. japonica
GN=LOC_Os12g33280 PE=4 SV=1
Length = 1269

Score = 40.0 bits (92), Expect = 0.069
Identities = 19/37 (51%), Positives = 28/37 (75%)
Frame = +3

Query: 267 RSKKNSAARQLANYLNRGFIQPSSSPWASLILLVTMK 377
+S+K+ RQ+A+ L +G IQPSSSP++S +LLV K
Sbjct: 467 QSQKDEIERQVADMLQQGIIQPSSSPFSSPVLLVLKK 503


>tr|Q0J6A2|Q0J6A2_ORYSJ Os08g0344700 protein OS=Oryza sativa subsp.
japonica GN=Os08g0344700 PE=4 SV=1
Length = 1364

Score = 38.5 bits (88), Expect = 0.20
Identities = 18/35 (51%), Positives = 25/35 (71%)
Frame = +3

Query: 273 KKNSAARQLANYLNRGFIQPSSSPWASLILLVTMK 377
+KN +Q++ LN+G IQPS SP+AS +LLV K
Sbjct: 885 QKNEIEKQVSQMLNQGIIQPSVSPFASPVLLVKKK 919


>tr|Q7XMS3|Q7XMS3_ORYSA OSJNBa0029L02.14 protein OS=Oryza sativa
GN=OSJNBa0029L02.14 PE=4 SV=1
Length = 602

Score = 37.7 bits (86), Expect = 0.34
Identities = 17/39 (43%), Positives = 28/39 (71%)
Frame = +3

Query: 261 FHRSKKNSAARQLANYLNRGFIQPSSSPWASLILLVTMK 377
++ ++KN Q+++ L +G IQPSSSP++S +LLV K
Sbjct: 270 YNPAQKNEIEHQVSDMLQQGVIQPSSSPFSSPVLLVLKK 308


>tr|Q9AUY8|Q9AUY8_ARATH Putative uncharacterized protein T32O22.14
OS=Arabidopsis thaliana GN=T32O22.14 PE=4 SV=1
Length = 712

Score = 37.4 bits (85), Expect = 0.45
Identities = 16/29 (55%), Positives = 21/29 (72%)
Frame = +3

Query: 291 RQLANYLNRGFIQPSSSPWASLILLVTMK 377
+QL + L +GFIQPSSSPW + +L V K
Sbjct: 468 KQLDDLLEKGFIQPSSSPWGAPVLFVKKK 496


>tr|Q7XQR2|Q7XQR2_ORYSA OSJNBa0091D06.2 protein OS=Oryza sativa
GN=OSJNBa0091D06.2 PE=4 SV=1
Length = 877

Score = 37.0 bits (84), Expect = 0.59
Identities = 19/39 (48%), Positives = 25/39 (64%)
Frame = +3

Query: 261 FHRSKKNSAARQLANYLNRGFIQPSSSPWASLILLVTMK 377
F+ + KN +Q+A L G IQPSSSP++S LLV K
Sbjct: 549 FNPALKNEIEKQVAEMLQSGVIQPSSSPFSSPALLVKKK 587


>tr|Q2R3G0|Q2R3G0_ORYSJ Retrotransposon protein, putative,
unclassified OS=Oryza sativa subsp. japonica
GN=LOC_Os11g32060 PE=4 SV=1
Length = 1485

Score = 37.0 bits (84), Expect = 0.59
Identities = 19/48 (39%), Positives = 34/48 (70%), Gaps = 1/48 (2%)
Frame = +3

Query: 237 KPLSLCNAFHRS-KKNSAARQLANYLNRGFIQPSSSPWASLILLVTMK 377
+P+++C ++ +K+ Q+A+ L+RG I+PSSSP++S +LLV K
Sbjct: 660 QPVNVCPYRYKPLQKDEIECQVADMLDRGIIKPSSSPFSSPVLLVKKK 707


>tr|Q01JG0|Q01JG0_ORYSA H0502G05.6 protein OS=Oryza sativa
GN=H0502G05.6 PE=4 SV=1
Length = 898

Score = 37.0 bits (84), Expect = 0.59
Identities = 19/39 (48%), Positives = 25/39 (64%)
Frame = +3

Query: 261 FHRSKKNSAARQLANYLNRGFIQPSSSPWASLILLVTMK 377
F+ + KN +Q+A L G IQPSSSP++S LLV K
Sbjct: 570 FNPALKNEIEKQVAEMLQSGVIQPSSSPFSSPALLVKKK 608


>tr|A5BZW2|A5BZW2_VITVI Putative uncharacterized protein OS=Vitis
vinifera GN=VITISV_040537 PE=4 SV=1
Length = 1259

Score = 37.0 bits (84), Expect = 0.59
Identities = 17/35 (48%), Positives = 26/35 (74%)
Frame = +3

Query: 273 KKNSAARQLANYLNRGFIQPSSSPWASLILLVTMK 377
+K+ RQ+++ LN G I+PSSSP++S +LLV K
Sbjct: 471 QKDEIERQVSDMLNSGLIRPSSSPFSSPVLLVKKK 505


>tr|Q7XP03|Q7XP03_ORYSJ OSJNBb0013J13.17 protein OS=Oryza sativa
subsp. japonica GN=OSJNBb0013J13.17 PE=4 SV=1
Length = 864

Score = 36.6 bits (83), Expect = 0.77
Identities = 14/29 (48%), Positives = 22/29 (75%)
Frame = +3

Query: 291 RQLANYLNRGFIQPSSSPWASLILLVTMK 377
RQ+ ++G+++PSSSPW +L+LLV K
Sbjct: 106 RQIEELESKGYVRPSSSPWGALVLLVKKK 134