BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP916523|Adiantum capillus-veneris mRNA, clone:
YMU001_000088_F04.
         (445 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q6PBT9|Z385B_DANRE Zinc finger protein 385B OS=Danio rerio GN...    30   3.5  
sp|P37033|Y1689_LEGPH Uncharacterized protein lpg1689 OS=Legione...    30   3.5  
sp|Q09165|DIG1_CAEEL Mesocentin OS=Caenorhabditis elegans GN=dig...    30   4.6  
sp|Q3A241|PPNK_PELCD Probable inorganic polyphosphate/ATP-NAD ki...    30   6.0  
sp|P41357|L_RINDR Large structural protein OS=Rinderpest virus (...    29   7.8  
sp|P40460|NDC80_YEAST Kinetochore protein NDC80 OS=Saccharomyces...    29   10.0 

>sp|Q6PBT9|Z385B_DANRE Zinc finger protein 385B OS=Danio rerio
           GN=znf385b PE=2 SV=1
          Length = 492

 Score = 30.4 bits (67), Expect = 3.5
 Identities = 23/81 (28%), Positives = 31/81 (38%)
 Frame = +2

Query: 203 ASAPDEIELLPVPSSAHNLSASAPVFVPGHSAPVGANHAIAADSCYLLLPRVECPFQCKI 382
           AS  D+ E    P +AH + AS   FVP   APV    A+    C         P +   
Sbjct: 216 ASCSDQTEKSTEPLAAHKVPASPQAFVP---APVAPAVALVPSPCKTAPVHASPPTEPTG 272

Query: 383 SEAGPPKLXYPSSLYVGPSDP 445
                     P++L   PS+P
Sbjct: 273 LAVALKNTSKPAALPTAPSEP 293


>sp|P37033|Y1689_LEGPH Uncharacterized protein lpg1689 OS=Legionella
           pneumophila subsp. pneumophila (strain Philadelphia 1 /
           ATCC 33152 / DSM 7513) GN=lpg1689 PE=4 SV=1
          Length = 208

 Score = 30.4 bits (67), Expect = 3.5
 Identities = 18/64 (28%), Positives = 29/64 (45%), Gaps = 10/64 (15%)
 Frame = +1

Query: 37  EATTAAEFLDIVTHR----------DTIDTIHKSAHHLSFLAYKNFLAFCFKQDQEHCYS 186
           E    A FL+++T R          +  +TI+K    + +  +   L  C KQ +   Y+
Sbjct: 30  EMEQKAYFLNLLTARVAEFQNELKSEASNTINKQQILIQYEKFAKTLLICIKQPERTSYA 89

Query: 187 IHNY 198
           IHNY
Sbjct: 90  IHNY 93


>sp|Q09165|DIG1_CAEEL Mesocentin OS=Caenorhabditis elegans GN=dig-1
            PE=1 SV=2
          Length = 13100

 Score = 30.0 bits (66), Expect = 4.6
 Identities = 16/44 (36%), Positives = 26/44 (59%)
 Frame = +2

Query: 158  SSKTKNIVIAFITTFASAPDEIELLPVPSSAHNLSASAPVFVPG 289
            + KT+  V   +T   +AP+EI LLP+P+   N+  ++P  V G
Sbjct: 1270 AGKTQEAVSIQVTGPGTAPNEIVLLPMPNQEINVEWTSPDEVNG 1313


>sp|Q3A241|PPNK_PELCD Probable inorganic polyphosphate/ATP-NAD
           kinase OS=Pelobacter carbinolicus (strain DSM 2380 / Gra
           Bd 1) GN=ppnK PE=3 SV=1
          Length = 285

 Score = 29.6 bits (65), Expect = 6.0
 Identities = 16/35 (45%), Positives = 21/35 (60%)
 Frame = +2

Query: 185 AFITTFASAPDEIELLPVPSSAHNLSASAPVFVPG 289
           A++TTF S    I   P  S+A+NLSA  P+  PG
Sbjct: 164 AYLTTFKS-DGLIIATPTGSTAYNLSAGGPIISPG 197


>sp|P41357|L_RINDR Large structural protein OS=Rinderpest virus
           (strain RBOK) GN=L PE=3 SV=1
          Length = 2183

 Score = 29.3 bits (64), Expect = 7.8
 Identities = 9/36 (25%), Positives = 21/36 (58%)
 Frame = +1

Query: 49  AAEFLDIVTHRDTIDTIHKSAHHLSFLAYKNFLAFC 156
           + +  +I+  RD +  +H+  HH+ +L ++  L +C
Sbjct: 197 SGDSFEILISRDLVAIVHRRLHHVYYLTFELVLMYC 232


>sp|P40460|NDC80_YEAST Kinetochore protein NDC80 OS=Saccharomyces
           cerevisiae GN=TID3 PE=1 SV=1
          Length = 691

 Score = 28.9 bits (63), Expect = 10.0
 Identities = 12/33 (36%), Positives = 23/33 (69%), Gaps = 6/33 (18%)
 Frame = -3

Query: 278 RLELMRRDCELKKEQVKA------QFHQVQKQK 198
           +LE M+ +CELK+E++KA      + H++ ++K
Sbjct: 377 KLEKMKSECELKEEEIKALQSNISELHKILRKK 409

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP916523|Adiantum capillus-veneris mRNA, clone:
YMU001_000088_F04.
         (445 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A1CL86|A1CL86_ASPCL RNA polymerase II Elongator complex assoc...    37   0.48 
tr|Q7XHS8|Q7XHS8_ORYSJ Os07g0249100 protein OS=Oryza sativa subs...    36   0.82 
tr|Q2HAS7|Q2HAS7_CHAGB Putative uncharacterized protein OS=Chaet...    34   3.1  
tr|A8WIX8|A8WIX8_CAEBR Putative uncharacterized protein OS=Caeno...    34   4.1  
tr|A1D615|A1D615_NEOFI RNA polymerase II Elongator complex assoc...    33   7.0  

>tr|A1CL86|A1CL86_ASPCL RNA polymerase II Elongator complex
           associated protein Kti12, putative OS=Aspergillus
           clavatus GN=ACLA_041280 PE=4 SV=1
          Length = 420

 Score = 37.0 bits (84), Expect = 0.48
 Identities = 25/82 (30%), Positives = 37/82 (45%), Gaps = 12/82 (14%)
 Frame = +2

Query: 152 FASSKTKNIVIAFITTFASAPDEIE------------LLPVPSSAHNLSASAPVFVPGHS 295
           ++  K  + ++A I TF  A    E             +PVP +A      AP+FVP H 
Sbjct: 297 YSMEKCTSSIVAAIRTFTLATPSAESALAQSPDPRGIAIPVPDAA------APIFVPAHV 350

Query: 296 APVGANHAIAADSCYLLLPRVE 361
           A   A+  +AA    L LPR++
Sbjct: 351 ATAAASDELAAAGGILALPRLQ 372


>tr|Q7XHS8|Q7XHS8_ORYSJ Os07g0249100 protein OS=Oryza sativa subsp.
           japonica GN=P0021G06.106 PE=2 SV=1
          Length = 882

 Score = 36.2 bits (82), Expect = 0.82
 Identities = 20/66 (30%), Positives = 36/66 (54%)
 Frame = +2

Query: 155 ASSKTKNIVIAFITTFASAPDEIELLPVPSSAHNLSASAPVFVPGHSAPVGANHAIAADS 334
           A + T ++  A  +TF+++P    ++ V  S  N S +AP F+   S+   A H + AD+
Sbjct: 54  APTWTPDLARAVSSTFSASPTADVVISVLRSIRNPSLAAPFFLLASSSSASAPHPLPADA 113

Query: 335 CYLLLP 352
            + +LP
Sbjct: 114 YHAVLP 119


>tr|Q2HAS7|Q2HAS7_CHAGB Putative uncharacterized protein
           OS=Chaetomium globosum GN=CHGG_02677 PE=4 SV=1
          Length = 652

 Score = 34.3 bits (77), Expect = 3.1
 Identities = 19/51 (37%), Positives = 27/51 (52%)
 Frame = +2

Query: 293 SAPVGANHAIAADSCYLLLPRVECPFQCKISEAGPPKLXYPSSLYVGPSDP 445
           +AP G    + A++     PR + P + KIS+ G PK   PSS+  GP  P
Sbjct: 478 AAPTGKGGKLRANTLVGSKPRPQLPHKTKISKPGKPKAKKPSSI-TGPMTP 527


>tr|A8WIX8|A8WIX8_CAEBR Putative uncharacterized protein
           OS=Caenorhabditis briggsae GN=CBG23609 PE=4 SV=2
          Length = 413

 Score = 33.9 bits (76), Expect = 4.1
 Identities = 24/64 (37%), Positives = 30/64 (46%)
 Frame = +2

Query: 179 VIAFITTFASAPDEIELLPVPSSAHNLSASAPVFVPGHSAPVGANHAIAADSCYLLLPRV 358
           +I+FI  F S PDE  L P  SS+   S   PVF+ G  +P      I      L+  RV
Sbjct: 193 LISFILLFLSFPDESPLQPTESSSFLKSRFFPVFIVGLPSPTSPPFPIFQRK-ILIQSRV 251

Query: 359 ECPF 370
             PF
Sbjct: 252 TDPF 255


>tr|A1D615|A1D615_NEOFI RNA polymerase II Elongator complex
           associated protein Kti12, putative OS=Neosartorya
           fischeri (strain ATCC 1020 / DSM 3700 / NRRL 181)
           GN=NFIA_063200 PE=4 SV=1
          Length = 425

 Score = 33.1 bits (74), Expect = 7.0
 Identities = 17/44 (38%), Positives = 23/44 (52%)
 Frame = +2

Query: 230 LPVPSSAHNLSASAPVFVPGHSAPVGANHAIAADSCYLLLPRVE 361
           +PVP       ASAP+F+P H A  G    +A     L LPR++
Sbjct: 339 IPVPE------ASAPIFIPAHVATSGTTDELAGAGGMLALPRLQ 376