BP916527 |
Clone id |
YMU001_000088_F08 |
Library |
YMU01 |
Length |
403 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000088_F08. |
Accession |
BP916527 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL3726Contig1 |
Sequence |
TGGAGGTGCCACTAAGAGCTGATTCTGATAGCGCATTATCAGACGCTGACTTTGATGATG ATAGTGACTGGATTGGAAGCGACCCGTGTGATTCTGATGCAAGTGTAGAAAGTCTTGAGA CGAGAAAGCGAAATAAATGGTTTCAGTCCTTTTTTGACACACTTGATGATTTGTCCAATG AACAAATTATGGAGCATGATCGTCAGTGGCACTGCCCTGCCTGCTATGGGGGTGTTGGAG CGATAGAGTGGTATAGAGGCTTGCAACCTCTTTTAGCTCATGCAAAAACTCACAGAACAA AAAGGATTGGTCTTCATAGAGAATTTGCCAATGTACTGGAAGACGACCTTGAAGTACGGA GAGCCGGAACTGGTTCTTTGGCAGAAACTAAGTTTGGCAAGTG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
A1Y2B7 |
Definition |
sp|A1Y2B7|SGS3_MAIZE Protein SUPPRESSOR OF GENE SILENCING 3 homolog OS=Zea mays |
Align length |
104 |
Score (bit) |
122.0 |
E-value |
4.0e-28 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A7QR25 |
Definition |
tr|A7QR25|A7QR25_VITVI Chromosome undetermined scaffold_147, whole genome shotgun sequence OS=Vitis vinifera |
Align length |
103 |
Score (bit) |
124.0 |
E-value |
3.0e-27 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP916527|Adiantum capillus-veneris mRNA, clone: YMU001_000088_F08. (403 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A7QR25|A7QR25_VITVI Chromosome undetermined scaffold_147, who... 124 3e-27 tr|A5ANH9|A5ANH9_VITVI Putative uncharacterized protein OS=Vitis... 124 3e-27 tr|A9T5P8|A9T5P8_PHYPA Suppressor of silencing OS=Physcomitrella... 121 2e-26 tr|A9PJV9|A9PJV9_POPJC Putative uncharacterized protein OS=Popul... 108 2e-22 tr|Q2QWE8|Q2QWE8_ORYSJ Os12g0197700 protein OS=Oryza sativa subs... 101 2e-20 tr|A3CFS0|A3CFS0_ORYSJ Putative uncharacterized protein OS=Oryza... 101 2e-20 tr|B8BNK4|B8BNK4_ORYSI Putative uncharacterized protein OS=Oryza... 100 5e-20 tr|A2Q480|A2Q480_MEDTR Emr1, related OS=Medicago truncatula GN=M... 97 3e-19 tr|B8LNA2|B8LNA2_PICSI Putative uncharacterized protein OS=Picea... 71 2e-11 tr|A9NW99|A9NW99_PICSI Putative uncharacterized protein OS=Picea... 71 2e-11 tr|B2KZJ3|B2KZJ3_PICAB Suppressor of gene silencing 3 protein (F... 70 5e-11 tr|A4H9U1|A4H9U1_LEIBR Putative uncharacterized protein OS=Leish... 37 0.37 tr|A7UUA4|A7UUA4_ANOGA AGAP006460-PA OS=Anopheles gambiae GN=AGA... 36 0.85 tr|A6QXK9|A6QXK9_AJECN Predicted protein OS=Ajellomyces capsulat... 33 5.4 tr|Q4RP42|Q4RP42_TETNG Chromosome 1 SCAF15008, whole genome shot... 33 7.0 tr|Q49LT1|Q49LT1_TETNG XK-related protein 2a OS=Tetraodon nigrov... 33 7.0 tr|Q4X0A7|Q4X0A7_ASPFU Ubiquitin carboxyl-terminal hydrolase OS=... 33 9.1 tr|B0XTS3|B0XTS3_ASPFC Ubiquitin carboxyl-terminal hydrolase OS=... 33 9.1 tr|A1DHW7|A1DHW7_NEOFI Ubiquitin carboxyl-terminal hydrolase OS=... 33 9.1 tr|B3K8I7|B3K8I7_9BACI Putative uncharacterized protein OS=Geoba... 33 9.4 tr|B4M2J7|B4M2J7_DROVI GJ19505 OS=Drosophila virilis GN=GJ19505 ... 33 9.4
>tr|A7QR25|A7QR25_VITVI Chromosome undetermined scaffold_147, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00003647001 PE=4 SV=1 Length = 555
Score = 124 bits (310), Expect = 3e-27 Identities = 60/103 (58%), Positives = 76/103 (73%) Frame = +3
Query: 93 SDASVESLETRKRNKWFQSFFDTLDDLSNEQIMEHDRQWHCPACYGGVGAIEWYRGLQPL 272 SD S +S ETRK++KWF+SFF+ LD L+ E+I E RQWHCPAC GG GAI+WYRGLQPL Sbjct: 120 SDTSQKSHETRKKSKWFKSFFEILDSLTIEEINEPARQWHCPACQGGPGAIDWYRGLQPL 179
Query: 273 LAHAKTHRTKRIGLHREFANVLEDDLEVRRAGTGSLAETKFGK 401 + HAKT +KR+ LHRE A +L+++L RR + A FGK Sbjct: 180 ITHAKTKGSKRVKLHRELAELLDEEL-YRRGTSVVPAGEAFGK 221
>tr|A5ANH9|A5ANH9_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_043511 PE=4 SV=1 Length = 1849
Score = 124 bits (310), Expect = 3e-27 Identities = 60/103 (58%), Positives = 76/103 (73%) Frame = +3
Query: 93 SDASVESLETRKRNKWFQSFFDTLDDLSNEQIMEHDRQWHCPACYGGVGAIEWYRGLQPL 272 SD S +S ETRK++KWF+SFF+ LD L+ E+I E RQWHCPAC GG GAI+WYRGLQPL Sbjct: 520 SDTSQKSHETRKKSKWFKSFFEILDSLTIEEINEPARQWHCPACQGGPGAIDWYRGLQPL 579
Query: 273 LAHAKTHRTKRIGLHREFANVLEDDLEVRRAGTGSLAETKFGK 401 + HAKT +KR+ LHRE A +L+++L RR + A FGK Sbjct: 580 ITHAKTKGSKRVKLHRELAELLDEEL-YRRGTSVVPAGEAFGK 621
>tr|A9T5P8|A9T5P8_PHYPA Suppressor of silencing OS=Physcomitrella patens subsp. patens GN=SGS1501 PE=4 SV=1 Length = 725
Score = 121 bits (303), Expect = 2e-26 Identities = 52/99 (52%), Positives = 75/99 (75%), Gaps = 1/99 (1%) Frame = +3
Query: 108 ESLETRKRNKWFQSFFDTLDDLSNEQIMEHDRQWHCPACYGGVGAIEWYRGLQPLLAHAK 287 ES E +K+ KWF+ FF LD +++ Q+ EHDRQWHCPAC GG GAI+W+RGL PL HA+ Sbjct: 287 ESHEDQKKIKWFRDFFQDLDSMTDAQLNEHDRQWHCPACKGGPGAIDWFRGLVPLATHAR 346
Query: 288 THRTKRIGLHREFANVLEDDLEVRRAGTGSL-AETKFGK 401 T R++R+ LHR+FA +LE++L +RR+ ++ ++ FGK Sbjct: 347 TMRSRRVKLHRKFAEILEEELRIRRSAQPNVELQSTFGK 385
>tr|A9PJV9|A9PJV9_POPJC Putative uncharacterized protein OS=Populus jackii PE=2 SV=1 Length = 609
Score = 108 bits (269), Expect = 2e-22 Identities = 47/102 (46%), Positives = 69/102 (67%) Frame = +3
Query: 96 DASVESLETRKRNKWFQSFFDTLDDLSNEQIMEHDRQWHCPACYGGVGAIEWYRGLQPLL 275 DAS S + K++KWF +FFD D L+ E+I R+WHCPAC GG GAI+WYRG+ PL Sbjct: 174 DASENSYDVLKKSKWFNAFFDDFDKLTVEEINSRARKWHCPACKGGPGAIDWYRGIDPLA 233
Query: 276 AHAKTHRTKRIGLHREFANVLEDDLEVRRAGTGSLAETKFGK 401 HAKT +T+R+ LHR F+ +L++++ ++ G + FG+ Sbjct: 234 YHAKTKKTRRVKLHRMFSEILDEEMH-KKGGLVTPVGEAFGR 274
>tr|Q2QWE8|Q2QWE8_ORYSJ Os12g0197700 protein OS=Oryza sativa subsp. japonica GN=Os12g0197700 PE=4 SV=1 Length = 682
Score = 101 bits (251), Expect = 2e-20 Identities = 47/86 (54%), Positives = 62/86 (72%) Frame = +3
Query: 93 SDASVESLETRKRNKWFQSFFDTLDDLSNEQIMEHDRQWHCPACYGGVGAIEWYRGLQPL 272 S AS ++ ETRKR+K +S F+ L+ LS EQI E RQWHCPAC G + WY+GLQPL Sbjct: 246 SKASEKNFETRKRHKLLKSIFELLEKLSVEQINEKTRQWHCPACKNVRGGVTWYKGLQPL 305
Query: 273 LAHAKTHRTKRIGLHREFANVLEDDL 350 + HA+T +KR+ LHRE A +LE++L Sbjct: 306 MNHARTKGSKRVKLHRELAALLEEEL 331
>tr|A3CFS0|A3CFS0_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_034142 PE=4 SV=1 Length = 667
Score = 101 bits (251), Expect = 2e-20 Identities = 47/86 (54%), Positives = 62/86 (72%) Frame = +3
Query: 93 SDASVESLETRKRNKWFQSFFDTLDDLSNEQIMEHDRQWHCPACYGGVGAIEWYRGLQPL 272 S AS ++ ETRKR+K +S F+ L+ LS EQI E RQWHCPAC G + WY+GLQPL Sbjct: 246 SKASEKNFETRKRHKLLKSIFELLEKLSVEQINEKTRQWHCPACKNVRGGVTWYKGLQPL 305
Query: 273 LAHAKTHRTKRIGLHREFANVLEDDL 350 + HA+T +KR+ LHRE A +LE++L Sbjct: 306 MNHARTKGSKRVKLHRELAALLEEEL 331
>tr|B8BNK4|B8BNK4_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_37773 PE=4 SV=1 Length = 652
Score = 100 bits (248), Expect = 5e-20 Identities = 46/86 (53%), Positives = 62/86 (72%) Frame = +3
Query: 93 SDASVESLETRKRNKWFQSFFDTLDDLSNEQIMEHDRQWHCPACYGGVGAIEWYRGLQPL 272 S A+ ++ ETRKR+K +S F+ L+ LS EQI E RQWHCPAC G + WY+GLQPL Sbjct: 216 SKAAEKNFETRKRHKLLKSIFELLEKLSVEQINEKTRQWHCPACKNVRGGVTWYKGLQPL 275
Query: 273 LAHAKTHRTKRIGLHREFANVLEDDL 350 + HA+T +KR+ LHRE A +LE++L Sbjct: 276 MNHARTKGSKRVKLHRELAALLEEEL 301
>tr|A2Q480|A2Q480_MEDTR Emr1, related OS=Medicago truncatula GN=MtrDRAFT_AC157375g28v1 PE=4 SV=1 Length = 630
Score = 97.4 bits (241), Expect = 3e-19 Identities = 43/91 (47%), Positives = 61/91 (67%) Frame = +3
Query: 93 SDASVESLETRKRNKWFQSFFDTLDDLSNEQIMEHDRQWHCPACYGGVGAIEWYRGLQPL 272 SD +S E K++KWF+ FF+ L+ L+ E+I +WHCPAC G GAI+WY GLQPL Sbjct: 217 SDTGEKSHEGSKKSKWFRKFFNDLNKLTVEEISSPATRWHCPACQDGPGAIDWYHGLQPL 276
Query: 273 LAHAKTHRTKRIGLHREFANVLEDDLEVRRA 365 L H++T + +R LHR F+ LE++ +R A Sbjct: 277 LNHSRTIKVRRARLHRAFSETLEEECSMRGA 307
>tr|B8LNA2|B8LNA2_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 419
Score = 71.2 bits (173), Expect = 2e-11 Identities = 36/95 (37%), Positives = 61/95 (64%) Frame = +3
Query: 117 ETRKRNKWFQSFFDTLDDLSNEQIMEHDRQWHCPACYGGVGAIEWYRGLQPLLAHAKTHR 296 E K++K F+ F+++D L+ +++ ++R+W CPAC G A E ++GL+PL+ HAK R Sbjct: 71 EAMKKHKVFKKLFESMDALTFKEV--NNREWTCPACRAG--AAETHKGLKPLIDHAKNAR 126
Query: 297 TKRIGLHREFANVLEDDLEVRRAGTGSLAETKFGK 401 + LHR+ VLE++L+ RR+ G + +GK Sbjct: 127 QWNVRLHRKLVKVLEEELK-RRSAAGFAVQEVYGK 160
>tr|A9NW99|A9NW99_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 419
Score = 71.2 bits (173), Expect = 2e-11 Identities = 36/95 (37%), Positives = 61/95 (64%) Frame = +3
Query: 117 ETRKRNKWFQSFFDTLDDLSNEQIMEHDRQWHCPACYGGVGAIEWYRGLQPLLAHAKTHR 296 E K++K F+ F+++D L+ +++ ++R+W CPAC G A E ++GL+PL+ HAK R Sbjct: 71 EAMKKHKVFKKLFESMDALTFKEV--NNREWTCPACRAG--AAETHKGLKPLIDHAKNAR 126
Query: 297 TKRIGLHREFANVLEDDLEVRRAGTGSLAETKFGK 401 + LHR+ VLE++L+ RR+ G + +GK Sbjct: 127 QWNVRLHRKLVKVLEEELK-RRSAAGFAVQEVYGK 160
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