BP916534 |
Clone id |
YMU001_000088_G03 |
Library |
YMU01 |
Length |
505 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000088_G03. |
Accession |
BP916534 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
CCACAGAGGCTCTTCACTGCCCGAATCTTTAGCGACACAGCTCACTAAGATGCTGTCCAA GCGTTCCCACTTCAAAGTATCAACATATGCCTCAAGGCCGCCATCCTTTGCCTCCGATAA ACATTTCTTGTGGAAGCCCATAGGTCGATCGAGACGACGACTGTGAATGAAAAATGTGGA GATTCTTGTCCTTTGTAGTATAGCAAAAGTACTCCCCATCTGGACTCCAGTCCACAGCTT CAACATCTTCAGCCACAACTTTCAGATGCTCTTCCGTGAACAAGCCCAAACTCAGCTTTC CTTCTTTTGACAATTTCAGAATAACCCCCCTCTGACCTGGGTTCCATGCAAGCACTTTAA TCCCACACTCCTCACCCAGTGACTTGAGCAAAGCTGTCCCATTTCTGCCCTTTTCCGCAA GTGCCGGTACGCTATAGAAATTGATTTTGTCCTCCGTGCAGGCTGCCATCACAAGTTCAT CTTCTGAAAGGGCTAAACACTGTGT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q0V8F1 |
Definition |
sp|Q0V8F1|CORO7_BOVIN Coronin-7 OS=Bos taurus |
Align length |
122 |
Score (bit) |
36.6 |
E-value |
0.069 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A7P0C6 |
Definition |
tr|A7P0C6|A7P0C6_VITVI Chromosome chr6 scaffold_3, whole genome shotgun sequence OS=Vitis vinifera |
Align length |
131 |
Score (bit) |
42.4 |
E-value |
0.013 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP916534|Adiantum capillus-veneris mRNA, clone: YMU001_000088_G03. (505 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A7P0C6|A7P0C6_VITVI Chromosome chr6 scaffold_3, whole genome ... 42 0.013 tr|Q57W63|Q57W63_9TRYP Coronin, putative OS=Trypanosoma brucei G... 37 0.41 tr|Q24FU3|Q24FU3_TETTH WD-repeat protein HUSSY-07, putative OS=T... 37 0.41 tr|A2EIJ3|A2EIJ3_TRIVA Coronin, putative OS=Trichomonas vaginali... 37 0.54 tr|Q9NFT3|Q9NFT3_TRIVA Coronin (Fragment) OS=Trichomonas vaginal... 36 0.92 tr|Q3URT5|Q3URT5_MOUSE Putative uncharacterized protein OS=Mus m... 36 1.2 tr|Q023I5|Q023I5_SOLUE Kynureninase OS=Solibacter usitatus (stra... 36 1.2 tr|A5DT03|A5DT03_LODEL Periodic tryptophan protein 2 OS=Lodderom... 36 1.2 tr|Q3TC83|Q3TC83_MOUSE Putative uncharacterized protein OS=Mus m... 35 1.6 tr|B2GV82|B2GV82_RAT Nle1 protein OS=Rattus norvegicus GN=Nle1 P... 35 1.6 tr|B1ARD5|B1ARD5_MOUSE Notchless homolog 1 (Drosophila) OS=Mus m... 35 1.6 tr|Q59GJ8|Q59GJ8_HUMAN Notchless gene homolog variant (Fragment)... 35 1.6 tr|B4E303|B4E303_HUMAN cDNA FLJ57449, highly similar to Notchles... 35 1.6 tr|B4E074|B4E074_HUMAN cDNA FLJ58655, highly similar to Notchles... 35 1.6 tr|A9BG77|A9BG77_PETMO WD-40 repeat protein OS=Petrotoga mobilis... 35 2.7 tr|Q0D2B0|Q0D2B0_XENTR Notchless homolog 1 OS=Xenopus tropicalis... 34 3.5 tr|Q4R2Y0|Q4R2Y0_MACFA Testis cDNA clone: QtsA-21467, similar to... 34 3.5 tr|Q7ZXK9|Q7ZXK9_XENLA Nle-pending-prov protein OS=Xenopus laevi... 34 4.6 tr|O93531|O93531_XENLA Notchless OS=Xenopus laevis GN=nle1 PE=2 ... 34 4.6 tr|A4C1B1|A4C1B1_9FLAO Putative uncharacterized protein OS=Polar... 34 4.6 tr|A2U1R6|A2U1R6_9FLAO WD40-like repeat/amidohydrolase domain pr... 34 4.6 tr|A8B6Z3|A8B6Z3_GIALA WD-40 repeat protein family OS=Giardia la... 34 4.6 tr|B8M5U8|B8M5U8_9EURO Splicing factor 3B subunit 10 (SF3b10), p... 34 4.6 tr|A0PJP6|A0PJP6_XENTR LOC100145665 protein OS=Xenopus tropicali... 33 6.0 tr|Q7Z7A5|Q7Z7A5_HUMAN Myosin 5B OS=Homo sapiens GN=MYO5B PE=2 SV=1 33 6.0 tr|B3KSA2|B3KSA2_HUMAN cDNA FLJ35830 fis, clone TESTI2006465, hi... 33 6.0 tr|B8P447|B8P447_9APHY Predicted protein (Fragment) OS=Postia pl... 33 6.0 tr|B1KK09|B1KK09_SHEWM Transcriptional regulator, CadC OS=Shewan... 33 7.8 tr|A9USH0|A9USH0_MONBE Predicted protein OS=Monosiga brevicollis... 33 7.8 tr|A4I135|A4I135_LEIIN Notchless homolog, putative OS=Leishmania... 33 7.8
>tr|A7P0C6|A7P0C6_VITVI Chromosome chr6 scaffold_3, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00024855001 PE=4 SV=1 Length = 1103
Score = 42.4 bits (98), Expect = 0.013 Identities = 36/131 (27%), Positives = 53/131 (40%) Frame = -1
Query: 496 LALSEDELVMAACTEDKINFYSVPALAEKGRNGTALLKSLGEECGIKVLAWNPGQRGVIX 317 LALS D +AA I+F+SV +L KG+ + +SL +K + W Sbjct: 111 LALSTDSSTLAASVGGDIHFFSVDSLLNKGQE-PSFTRSLSGSSSVKDMRWRKKMDNSYV 169
Query: 316 XXXXXXXXXXXLFTEEHLKVVAEDVEAVDWSPDGEYFCYTTKDKNLHIFHSQSSSRSTYG 137 E LK V + V+AV+WS G K+ L + S+ R Sbjct: 170 VLSSDGKLYHGA-AEGPLKDVMDGVDAVEWSVKGNSIAVARKN-TLSLLSSKFKERLCMS 227
Query: 136 LPQEMFIGGKG 104 L + +IG G Sbjct: 228 LSFKSWIGDSG 238
>tr|Q57W63|Q57W63_9TRYP Coronin, putative OS=Trypanosoma brucei GN=Tb927.8.3100 PE=4 SV=1 Length = 523
Score = 37.4 bits (85), Expect = 0.41 Identities = 16/39 (41%), Positives = 25/39 (64%) Frame = -1
Query: 274 EEHLKVVAEDVEAVDWSPDGEYFCYTTKDKNLHIFHSQS 158 +E +K AE + ++DW+ DG C T+KDK L+I +S Sbjct: 185 KEVVKCHAEQISSLDWNLDGSLLCTTSKDKKLNIVDPRS 223
>tr|Q24FU3|Q24FU3_TETTH WD-repeat protein HUSSY-07, putative OS=Tetrahymena thermophila SB210 GN=TTHERM_00941520 PE=4 SV=1 Length = 494
Score = 37.4 bits (85), Expect = 0.41 Identities = 25/83 (30%), Positives = 36/83 (43%), Gaps = 3/83 (3%) Frame = -1
Query: 409 GRNGTALLKSLGEECGIKVLAWNPGQRGVIXXXXXXXXXXXXLFTEE---HLKVVAEDVE 239 G NG + G + +AW+P R + + T++ L A++V Sbjct: 410 GFNGAYIASFRGHVASVYQIAWSPDNRLFVSGSKDSTMKVWDIKTKKLMFDLPGHADEVY 469
Query: 238 AVDWSPDGEYFCYTTKDKNLHIF 170 VDWSPDG C KDK L I+ Sbjct: 470 GVDWSPDGLKVCSGGKDKLLKIW 492
>tr|A2EIJ3|A2EIJ3_TRIVA Coronin, putative OS=Trichomonas vaginalis G3 GN=TVAG_124870 PE=4 SV=1 Length = 436
Score = 37.0 bits (84), Expect = 0.54 Identities = 24/106 (22%), Positives = 43/106 (40%), Gaps = 4/106 (3%) Frame = -1
Query: 415 EKGRNGTALLKSLGEECGIKVLAWNPGQRGVIXXXXXXXXXXXXLFTEEH----LKVVAE 248 EK A++K G ++ L WNP G I + K + Sbjct: 114 EKQNESLAVMK--GHSRRVQRLTWNPAVNGAIATFGAENSVKVWDVAKAQCACTFKPGKD 171
Query: 247 DVEAVDWSPDGEYFCYTTKDKNLHIFHSQSSSRSTYGLPQEMFIGG 110 + ++W+ +G CY KDK LH+ ++++ T+ +P + G Sbjct: 172 SLLDINWNQNGNLLCYPMKDKKLHVLDIRANT-ETFAVPSHPGLRG 216
>tr|Q9NFT3|Q9NFT3_TRIVA Coronin (Fragment) OS=Trichomonas vaginalis GN=cor2 PE=4 SV=1 Length = 336
Score = 36.2 bits (82), Expect = 0.92 Identities = 24/106 (22%), Positives = 43/106 (40%), Gaps = 4/106 (3%) Frame = -1
Query: 415 EKGRNGTALLKSLGEECGIKVLAWNPGQRGVIXXXXXXXXXXXXLFTEEH----LKVVAE 248 EK A++K G ++ L WNP G I + K + Sbjct: 14 EKQNESLAVMK--GHSRRVQRLTWNPAVNGAIATFGAENSVKVWDVAKAQCAYTFKPGKD 71
Query: 247 DVEAVDWSPDGEYFCYTTKDKNLHIFHSQSSSRSTYGLPQEMFIGG 110 + ++W+ +G CY KDK LH+ ++++ T+ +P + G Sbjct: 72 ALLDINWNQNGNLLCYPMKDKKLHVLDIRANA-ETFAVPSHPGLRG 116
>tr|Q3URT5|Q3URT5_MOUSE Putative uncharacterized protein OS=Mus musculus GN=Nle1 PE=2 SV=1 Length = 485
Score = 35.8 bits (81), Expect = 1.2 Identities = 30/110 (27%), Positives = 47/110 (42%), Gaps = 4/110 (3%) Frame = -1
Query: 487 SEDELVMAACTEDK-INFYSVPALAEKGRNGTALLKSLGEECGIKVLAWNPGQRGVIXXX 311 S D ++A+ + DK I + GR G L G + +AW+ R ++ Sbjct: 381 SPDSRIVASASFDKSIKLWD-------GRTGKYLASLRGHVAAVYQIAWSADSRLLVSGS 433
Query: 310 XXXXXXXXXLFTEE---HLKVVAEDVEAVDWSPDGEYFCYTTKDKNLHIF 170 + ++ L A++V AVDWSPDG+ KDK L I+ Sbjct: 434 SDSTLKVWDVKAQKLATDLPGHADEVYAVDWSPDGQRVASGRKDKCLRIW 483
>tr|Q023I5|Q023I5_SOLUE Kynureninase OS=Solibacter usitatus (strain Ellin6076) GN=Acid_2875 PE=4 SV=1 Length = 388
Score = 35.8 bits (81), Expect = 1.2 Identities = 19/41 (46%), Positives = 25/41 (60%), Gaps = 1/41 (2%) Frame = -1
Query: 445 INFYSVPALAEKGRNGTALLKSLGEECGIKV-LAWNPGQRG 326 +N VPA+ EK T+LL +L +E GIK+ NP QRG Sbjct: 286 VNEIGVPAIREKSLRQTSLLIALADEAGIKINTCRNPAQRG 326
>tr|A5DT03|A5DT03_LODEL Periodic tryptophan protein 2 OS=Lodderomyces elongisporus GN=LELG_00489 PE=4 SV=1 Length = 935
Score = 35.8 bits (81), Expect = 1.2 Identities = 15/34 (44%), Positives = 21/34 (61%) Frame = -1
Query: 250 EDVEAVDWSPDGEYFCYTTKDKNLHIFHSQSSSR 149 +DV ++ WS D +YF T+KD I+ QSS R Sbjct: 147 DDVLSISWSEDSKYFISTSKDMTARIYSLQSSDR 180
>tr|Q3TC83|Q3TC83_MOUSE Putative uncharacterized protein OS=Mus musculus GN=Nle1 PE=2 SV=1 Length = 485
Score = 35.4 bits (80), Expect = 1.6 Identities = 30/110 (27%), Positives = 47/110 (42%), Gaps = 4/110 (3%) Frame = -1
Query: 487 SEDELVMAACTEDK-INFYSVPALAEKGRNGTALLKSLGEECGIKVLAWNPGQRGVIXXX 311 S D ++A+ + DK I + GR G L G + +AW+ R ++ Sbjct: 381 SPDSRIVASASFDKSIKLWD-------GRTGKYLASLRGHVAAVYQIAWSADSRLLVSGS 433
Query: 310 XXXXXXXXXLFTEE---HLKVVAEDVEAVDWSPDGEYFCYTTKDKNLHIF 170 + ++ L A++V AVDWSPDG+ KDK L I+ Sbjct: 434 SDSTLKVWDVKAQKLATDLPGHADEVYAVDWSPDGQRVASGGKDKCLRIW 483
>tr|B2GV82|B2GV82_RAT Nle1 protein OS=Rattus norvegicus GN=Nle1 PE=2 SV=1 Length = 487
Score = 35.4 bits (80), Expect = 1.6 Identities = 30/110 (27%), Positives = 47/110 (42%), Gaps = 4/110 (3%) Frame = -1
Query: 487 SEDELVMAACTEDK-INFYSVPALAEKGRNGTALLKSLGEECGIKVLAWNPGQRGVIXXX 311 S D ++A+ + DK I + GR G L G + +AW+ R ++ Sbjct: 383 SPDSRIVASASFDKSIKLWD-------GRTGKYLASLRGHVAAVYQIAWSADSRLLVSGS 435
Query: 310 XXXXXXXXXLFTEE---HLKVVAEDVEAVDWSPDGEYFCYTTKDKNLHIF 170 + ++ L A++V AVDWSPDG+ KDK L I+ Sbjct: 436 SDSTLKVWDVKAQKLTTDLPGHADEVYAVDWSPDGQRVASGGKDKCLRIW 485
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