BP916546
Clone id YMU001_000088_H04
Library
Length 559
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000088_H04.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
GGACACCTGTCCGAGAGTTGTAGTAGCACAGCATTCCCATATCAGGTGCAACATCCACTT
TGGTAAACTGATTGTATGTGGGCAGTGGTATCATATGCCCTTGCCCCGTATGCTTCTCTG
CCCAATTCTTAGTTCTCCAAAATTGTAGCTGCTTCTGCAACTTTTTCATTCTCTCCAATA
AATCCTTCACATCGACAGCTTGATAATCACGTGCTTGGAGAGCCTCAACATCACAATCCT
CCAGTGATAGAATTGCAACATCATCAGTCTGCACGATTTCATCTTTGCTCACTTCAGCGG
CCAGCCTCCGAGACTTTCTTTTTGCTTTAGGCAGAACTTGTACAGATGCCGAATCAGACG
GTTTCACGTCTAACACATTTATAGAGACCTTAGGTATGATTAGTTTGTTCTCGACACTGA
CAAAATCACTTTCACTTTTAGAGGATCTTGAAGGCTCTGAGAAAATGGGCCTTCCCTCCA
CTGATTGTCCTTTTGTATCAGAGCTCGTCGCCTTTGCACCCTCTTGCATCTGTACACCCT
CAATCGCCGTCGATGCATT
■■Homology search results ■■ -
sp_hit_id Q07E28
Definition sp|Q07E28|CTTB2_NEONE Cortactin-binding protein 2 OS=Neofelis nebulosa
Align length 95
Score (bit) 32.0
E-value 2.1
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP916546|Adiantum capillus-veneris mRNA, clone:
YMU001_000088_H04.
(559 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q07E28|CTTB2_NEONE Cortactin-binding protein 2 OS=Neofelis ne... 32 2.1
sp|Q9QVP9|FAK2_MOUSE Protein tyrosine kinase 2 beta OS=Mus muscu... 32 2.8
sp|A9FD62|LIPA_SORC5 Lipoyl synthase OS=Sorangium cellulosum (st... 31 3.6
sp|P70600|FAK2_RAT Protein tyrosine kinase 2 beta OS=Rattus norv... 31 3.6
sp|Q8CWX7|UVRB_STRMU UvrABC system protein B OS=Streptococcus mu... 31 4.7
sp|Q14289|FAK2_HUMAN Protein tyrosine kinase 2 beta OS=Homo sapi... 31 4.7
sp|Q7T019|DZIP1_DANRE Zinc finger protein Dzip1 OS=Danio rerio G... 30 6.2
sp|Q2QLA2|CTTB2_HORSE Cortactin-binding protein 2 OS=Equus cabal... 30 6.2
sp|A0M8T5|CTTB2_FELCA Cortactin-binding protein 2 OS=Felis silve... 30 6.2
sp|Q9I7U4|TITIN_DROME Titin OS=Drosophila melanogaster GN=sls PE... 30 8.1
sp|Q08156|KIT_CHICK Mast/stem cell growth factor receptor OS=Gal... 30 8.1
sp|Q07E41|CTTB2_DASNO Cortactin-binding protein 2 OS=Dasypus nov... 30 8.1

>sp|Q07E28|CTTB2_NEONE Cortactin-binding protein 2 OS=Neofelis
nebulosa GN=CTTNBP2 PE=3 SV=1
Length = 1658

Score = 32.0 bits (71), Expect = 2.1
Identities = 24/95 (25%), Positives = 47/95 (49%), Gaps = 4/95 (4%)
Frame = -1

Query: 415 VENKLIIPKVSINVLDVKPSDSASVQVLPKAKRKSRRLAAEVSKDEIVQTDDVAILSLED 236
+E + +V + + + K SA + L KR+S + A++ K LS D
Sbjct: 186 IEEAQKLEEVMVKLEEEKTKTSALEEELSAEKRRSTEMEAQMEKQ----------LSEFD 235

Query: 235 CDVEALQAR----DYQAVDVKDLLERMKKLQKQLQ 143
+ E L+A+ + D+K+ +++MKK+ +QL+
Sbjct: 236 TEREQLRAKLHREEAHTTDLKEEIDKMKKMIEQLK 270


>sp|Q9QVP9|FAK2_MOUSE Protein tyrosine kinase 2 beta OS=Mus musculus
GN=Ptk2b PE=1 SV=1
Length = 1009

Score = 31.6 bits (70), Expect = 2.8
Identities = 27/79 (34%), Positives = 44/79 (55%), Gaps = 2/79 (2%)
Frame = -1

Query: 403 LIIPKVSINVLDVKPSDSASVQVLPKAKRK--SRRLAAEVSKDEIVQTDDVAILSLEDCD 230
L + K+ +V D+ PS AS + + +K ++ LA ++K ++ Q + V LS EDC
Sbjct: 915 LNLRKLIGSVDDLLPSLPASSRTEIEGTQKLLNKDLAELINKMKLAQQNAVTSLS-EDCK 973

Query: 229 VEALQARDYQAVDVKDLLE 173
+ L A AVD K+LL+
Sbjct: 974 RQMLTASHTLAVDAKNLLD 992


>sp|A9FD62|LIPA_SORC5 Lipoyl synthase OS=Sorangium cellulosum
(strain So ce56) GN=lipA PE=3 SV=1
Length = 372

Score = 31.2 bits (69), Expect = 3.6
Identities = 33/135 (24%), Positives = 60/135 (44%), Gaps = 4/135 (2%)
Frame = -1

Query: 421 VSVENKLIIPKVSINVLDVKPSDSASVQVLPKAKRKSRRLAAEVSKDEIVQ----TDDVA 254
V N ++ +++ + DV+ S S+ VL +AK + RRLAA+ ++ T
Sbjct: 159 VFAHNVEVVRRITRVIRDVRSSYDQSLAVLRRAKERQRRLAADAAEAGAPAPRRLTKSSI 218

Query: 253 ILSLEDCDVEALQARDYQAVDVKDLLERMKKLQKQLQFWRTKNWAEKHTGQGHMIPLPTY 74
++ + + D E L+A ++DL E + Q+ R + KH + T+
Sbjct: 219 MVGIGETDDEVLEA-------LRDLREAGVDIVTIGQYLRP---SSKHAPVQRFVEPETF 268

Query: 73 NQFTKVDVAPDMGML 29
F + A +MG L
Sbjct: 269 AAFER--AALEMGFL 281


>sp|P70600|FAK2_RAT Protein tyrosine kinase 2 beta OS=Rattus
norvegicus GN=Ptk2b PE=1 SV=1
Length = 1009

Score = 31.2 bits (69), Expect = 3.6
Identities = 27/79 (34%), Positives = 43/79 (54%), Gaps = 2/79 (2%)
Frame = -1

Query: 403 LIIPKVSINVLDVKPSDSASVQVLPKAKRK--SRRLAAEVSKDEIVQTDDVAILSLEDCD 230
L + K+ +V D+ PS AS + + +K ++ LA ++K + Q + V LS EDC
Sbjct: 915 LNLRKLIGSVDDLLPSLPASSRTEIEGTQKLLNKDLAELINKMRLAQQNAVTSLS-EDCK 973

Query: 229 VEALQARDYQAVDVKDLLE 173
+ L A AVD K+LL+
Sbjct: 974 RQMLTASHTLAVDAKNLLD 992


>sp|Q8CWX7|UVRB_STRMU UvrABC system protein B OS=Streptococcus
mutans GN=uvrB PE=3 SV=1
Length = 663

Score = 30.8 bits (68), Expect = 4.7
Identities = 18/41 (43%), Positives = 25/41 (60%)
Frame = -1

Query: 265 DDVAILSLEDCDVEALQARDYQAVDVKDLLERMKKLQKQLQ 143
D +AI D +V A +A DY A+ + E +KKLQKQ+Q
Sbjct: 599 DLIAITKANDSEV-AEEAVDYNAMTKSERQEAIKKLQKQMQ 638


>sp|Q14289|FAK2_HUMAN Protein tyrosine kinase 2 beta OS=Homo sapiens
GN=PTK2B PE=1 SV=2
Length = 1009

Score = 30.8 bits (68), Expect = 4.7
Identities = 25/79 (31%), Positives = 42/79 (53%), Gaps = 2/79 (2%)
Frame = -1

Query: 403 LIIPKVSINVLDVKPS--DSASVQVLPKAKRKSRRLAAEVSKDEIVQTDDVAILSLEDCD 230
L + K+ +V D+ PS S+ ++ K ++ LA ++K + Q + V LS E+C
Sbjct: 915 LTLRKLIGSVDDLLPSLPSSSRTEIEGTQKLLNKDLAELINKMRLAQQNAVTSLS-EECK 973

Query: 229 VEALQARDYQAVDVKDLLE 173
+ L A AVD K+LL+
Sbjct: 974 RQMLTASHTLAVDAKNLLD 992


>sp|Q7T019|DZIP1_DANRE Zinc finger protein Dzip1 OS=Danio rerio
GN=dzip1 PE=2 SV=2
Length = 898

Score = 30.4 bits (67), Expect = 6.2
Identities = 10/28 (35%), Positives = 20/28 (71%)
Frame = -1

Query: 217 QARDYQAVDVKDLLERMKKLQKQLQFWR 134
Q +DY A K+L++R ++ ++QL+ W+
Sbjct: 272 QQKDYTAKQEKELIQRQEEFKRQLEIWK 299


>sp|Q2QLA2|CTTB2_HORSE Cortactin-binding protein 2 OS=Equus caballus
GN=CTTNBP2 PE=3 SV=1
Length = 1665

Score = 30.4 bits (67), Expect = 6.2
Identities = 24/95 (25%), Positives = 46/95 (48%), Gaps = 4/95 (4%)
Frame = -1

Query: 415 VENKLIIPKVSINVLDVKPSDSASVQVLPKAKRKSRRLAAEVSKDEIVQTDDVAILSLED 236
+E + +V + + K SA + L KR+S + A++ K LS D
Sbjct: 186 IEEAQKLEEVMAKLEEEKKKTSALEEELSAEKRRSTEMEAQMEKQ----------LSEFD 235

Query: 235 CDVEALQAR----DYQAVDVKDLLERMKKLQKQLQ 143
+ E L+A+ + D+K+ +++MKK+ +QL+
Sbjct: 236 TEREQLRAKLHREEAHTTDLKEEIDKMKKMIEQLK 270


>sp|A0M8T5|CTTB2_FELCA Cortactin-binding protein 2 OS=Felis
silvestris catus GN=CTTNBP2 PE=3 SV=1
Length = 1658

Score = 30.4 bits (67), Expect = 6.2
Identities = 24/95 (25%), Positives = 46/95 (48%), Gaps = 4/95 (4%)
Frame = -1

Query: 415 VENKLIIPKVSINVLDVKPSDSASVQVLPKAKRKSRRLAAEVSKDEIVQTDDVAILSLED 236
+E + +V + + K SA + L KR+S + A++ K LS D
Sbjct: 186 IEEAQKLEEVMAKLEEEKTKTSALEEELSAEKRRSTEMEAQMEKQ----------LSEFD 235

Query: 235 CDVEALQAR----DYQAVDVKDLLERMKKLQKQLQ 143
+ E L+A+ + D+K+ +++MKK+ +QL+
Sbjct: 236 TEREQLRAKLHREEAHTTDLKEEIDKMKKMIEQLK 270


>sp|Q9I7U4|TITIN_DROME Titin OS=Drosophila melanogaster GN=sls PE=1 SV=3
Length = 18141

Score = 30.0 bits (66), Expect = 8.1
Identities = 21/81 (25%), Positives = 40/81 (49%), Gaps = 1/81 (1%)
Frame = -1

Query: 394 PKVSINVLDVKPSDSASVQVLP-KAKRKSRRLAAEVSKDEIVQTDDVAILSLEDCDVEAL 218
P INV+ ++ S ++ K K+KSR+ + KD++ D I L + ++
Sbjct: 12366 PFYEINVISSANTEGDSEEITTDKIKKKSRK----IKKDDL----DAYIQQLINAEIPVT 12417

Query: 217 QARDYQAVDVKDLLERMKKLQ 155
+ Y+ +DV ++ KKL+
Sbjct: 12418 ELEKYEKIDVDGKAKKPKKLK 12438


tr_hit_id A4Y1N6
Definition tr|A4Y1N6|A4Y1N6_SHEPC Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) OS=Shewanella putrefaciens (strain CN-32 / ATCC BAA-453)
Align length 59
Score (bit) 35.4
E-value 2.1
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP916546|Adiantum capillus-veneris mRNA, clone:
YMU001_000088_H04.
(559 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A4Y1N6|A4Y1N6_SHEPC Diguanylate cyclase/phosphodiesterase wit... 35 2.1
tr|A1RPZ8|A1RPZ8_SHESW Diguanylate cyclase/phosphodiesterase wit... 35 2.1
tr|A2UXT9|A2UXT9_SHEPU Diguanylate cyclase/phosphodiesterase wit... 35 2.1
tr|Q7SYR8|Q7SYR8_XENLA Apacd-prov protein OS=Xenopus laevis GN=t... 35 3.6
tr|A3YB29|A3YB29_9GAMM Putative uncharacterized protein OS=Marin... 35 3.6
tr|B4JVF0|B4JVF0_DROGR GH22685 OS=Drosophila grimshawi GN=GH2268... 35 3.6
tr|Q7ZXC0|Q7ZXC0_XENLA Apacd-prov protein (Fragment) OS=Xenopus ... 34 6.2
tr|B5LEN7|B5LEN7_TRYBB ESAG2 type 8 (Fragment) OS=Trypanosoma br... 34 6.2
tr|B5LEN1|B5LEN1_TRYBB ESAG2 type 2 (Fragment) OS=Trypanosoma br... 34 6.2
tr|A6S734|A6S734_BOTFB Predicted protein OS=Botryotinia fuckelia... 34 6.2
tr|A4C2E1|A4C2E1_9FLAO Putative uncharacterized protein OS=Polar... 33 8.1

>tr|A4Y1N6|A4Y1N6_SHEPC Diguanylate cyclase/phosphodiesterase with
PAS/PAC sensor(S) OS=Shewanella putrefaciens (strain
CN-32 / ATCC BAA-453) GN=Sputcn32_0133 PE=3 SV=1
Length = 1077

Score = 35.4 bits (80), Expect = 2.1
Identities = 19/59 (32%), Positives = 30/59 (50%)
Frame = +1

Query: 91 SYALAPYASLPNS*FSKIVAASATFSFSPINPSHRQLDNHVLGEPQHHNPPVIELQHHQ 267
S+AL+ A++ N IV A INP+ Q+ + L E + HNP ++ + HQ
Sbjct: 505 SHALSRAAAVFNYSAEGIVVTDAENHIELINPAFTQITGYTLNEIKGHNPSILSAKRHQ 563


>tr|A1RPZ8|A1RPZ8_SHESW Diguanylate cyclase/phosphodiesterase with
PAS/PAC sensor(S) OS=Shewanella sp. (strain W3-18-1)
GN=Sputw3181_3939 PE=3 SV=1
Length = 1077

Score = 35.4 bits (80), Expect = 2.1
Identities = 19/59 (32%), Positives = 30/59 (50%)
Frame = +1

Query: 91 SYALAPYASLPNS*FSKIVAASATFSFSPINPSHRQLDNHVLGEPQHHNPPVIELQHHQ 267
S+AL+ A++ N IV A INP+ Q+ + L E + HNP ++ + HQ
Sbjct: 505 SHALSRAAAVFNYSAEGIVVTDAENHIELINPAFTQITGYTLNEIKGHNPSILSAKRHQ 563


>tr|A2UXT9|A2UXT9_SHEPU Diguanylate cyclase/phosphodiesterase with
PAS/PAC sensor(S) OS=Shewanella putrefaciens 200
GN=Sput200DRAFT_0638 PE=3 SV=1
Length = 1077

Score = 35.4 bits (80), Expect = 2.1
Identities = 19/59 (32%), Positives = 30/59 (50%)
Frame = +1

Query: 91 SYALAPYASLPNS*FSKIVAASATFSFSPINPSHRQLDNHVLGEPQHHNPPVIELQHHQ 267
S+AL+ A++ N IV A INP+ Q+ + L E + HNP ++ + HQ
Sbjct: 505 SHALSRAAAVFNYSAEGIVVTDAENHIELINPAFTQITGYTLNEIKGHNPSILSAKRHQ 563


>tr|Q7SYR8|Q7SYR8_XENLA Apacd-prov protein OS=Xenopus laevis
GN=txndc9 PE=2 SV=1
Length = 226

Score = 34.7 bits (78), Expect = 3.6
Identities = 25/95 (26%), Positives = 50/95 (52%), Gaps = 2/95 (2%)
Frame = -1

Query: 298 AEVSKDEIVQTDDVAILSLEDCDVEALQARDYQAVDV--KDLLERMKKLQKQLQFWRTKN 125
A+V +++++QT + L D ++E L D +++ + LE +KK+QKQ Q W +K
Sbjct: 11 AKVMENQLLQTAKIMEEQL-DAELEKLDKTDEDEMELLKERRLEALKKVQKQKQEWLSK- 68

Query: 124 WAEKHTGQGHMIPLPTYNQFTKVDVAPDMGMLCYY 20
G G +P+ +F + +V ++C++
Sbjct: 69 ------GHGEYREIPSEREFFQ-EVKESKNVVCHF 96


>tr|A3YB29|A3YB29_9GAMM Putative uncharacterized protein
OS=Marinomonas sp. MED121 GN=MED121_08703 PE=4 SV=1
Length = 82

Score = 34.7 bits (78), Expect = 3.6
Identities = 22/61 (36%), Positives = 36/61 (59%)
Frame = -1

Query: 325 AKRKSRRLAAEVSKDEIVQTDDVAILSLEDCDVEALQARDYQAVDVKDLLERMKKLQKQL 146
+K S+ + A+V + D + ++S ED DV+A Y+ V +L ERM+KL++QL
Sbjct: 21 SKLPSKEIQAQVQQLAKSTLDKMDLVSREDFDVQAAMLAKYRE-RVIELEERMQKLEQQL 79

Query: 145 Q 143
Q
Sbjct: 80 Q 80


>tr|B4JVF0|B4JVF0_DROGR GH22685 OS=Drosophila grimshawi GN=GH22685
PE=4 SV=1
Length = 335

Score = 34.7 bits (78), Expect = 3.6
Identities = 25/104 (24%), Positives = 48/104 (46%), Gaps = 3/104 (2%)
Frame = -1

Query: 346 SVQVLPKAKRKSRRLAAEVSKDEIVQTDDVAILSLEDCDVEALQARDYQAVDVKDLLERM 167
S+Q + +++S L SKD ++Q+ ++ + RD A++ KDLL+ M
Sbjct: 180 SLQSYAQKEQRSSHLDRRASKDALLQSRHYIFTEARSVSLDRFKRRDDLAIESKDLLKIM 239

Query: 166 KK---LQKQLQFWRTKNWAEKHTGQGHMIPLPTYNQFTKVDVAP 44
+K + + + + +E G+ +PL + V VAP
Sbjct: 240 RKQSTIAEPARIYHPAKLSEPIRGRRLSVPLSI--NYQTVHVAP 281


>tr|Q7ZXC0|Q7ZXC0_XENLA Apacd-prov protein (Fragment) OS=Xenopus
laevis GN=apacd-prov PE=2 SV=1
Length = 263

Score = 33.9 bits (76), Expect = 6.2
Identities = 25/95 (26%), Positives = 49/95 (51%), Gaps = 2/95 (2%)
Frame = -1

Query: 298 AEVSKDEIVQTDDVAILSLEDCDVEALQARDYQAVDV--KDLLERMKKLQKQLQFWRTKN 125
A+V +++++QT + L D ++E L D +++ + LE +KK QKQ Q W +K
Sbjct: 48 AKVMENQLLQTAKIMEEQL-DAELEKLDKTDEDEMELLKERRLEALKKAQKQKQEWLSK- 105

Query: 124 WAEKHTGQGHMIPLPTYNQFTKVDVAPDMGMLCYY 20
G G +P+ +F + +V ++C++
Sbjct: 106 ------GHGEYREIPSEREFFQ-EVKESKNVVCHF 133


>tr|B5LEN7|B5LEN7_TRYBB ESAG2 type 8 (Fragment) OS=Trypanosoma
brucei brucei PE=4 SV=1
Length = 485

Score = 33.9 bits (76), Expect = 6.2
Identities = 24/83 (28%), Positives = 44/83 (53%), Gaps = 1/83 (1%)
Frame = -1

Query: 334 LPKAKRKSRRLAAEV-SKDEIVQTDDVAILSLEDCDVEALQARDYQAVDVKDLLERMKKL 158
LP+ K+R E+ SK E + + A S +D + + YQ +++ L E+ KKL
Sbjct: 74 LPQPSFKNREKEGEIMSKLEEMVREVEAAGSTQDLSHSSNRTTAYQ--EIRKLFEKAKKL 131

Query: 157 QKQLQFWRTKNWAEKHTGQGHMI 89
+++++ RTK H+ Q +M+
Sbjct: 132 KEEIEVNRTKALNASHSAQENML 154


>tr|B5LEN1|B5LEN1_TRYBB ESAG2 type 2 (Fragment) OS=Trypanosoma
brucei brucei PE=4 SV=1
Length = 454

Score = 33.9 bits (76), Expect = 6.2
Identities = 24/83 (28%), Positives = 44/83 (53%), Gaps = 1/83 (1%)
Frame = -1

Query: 334 LPKAKRKSRRLAAEV-SKDEIVQTDDVAILSLEDCDVEALQARDYQAVDVKDLLERMKKL 158
LP+ K+R E+ SK E + + A S +D + + YQ +++ L E+ KKL
Sbjct: 74 LPQPSFKNREKEGEIMSKLEEMVREVEAAGSTQDLSHSSNRTTAYQ--EIRKLFEKAKKL 131

Query: 157 QKQLQFWRTKNWAEKHTGQGHMI 89
+++++ RTK H+ Q +M+
Sbjct: 132 KEEIEVNRTKALNASHSAQENML 154


>tr|A6S734|A6S734_BOTFB Predicted protein OS=Botryotinia fuckeliana
(strain B05.10) GN=BC1G_08609 PE=4 SV=1
Length = 428

Score = 33.9 bits (76), Expect = 6.2
Identities = 32/116 (27%), Positives = 53/116 (45%), Gaps = 9/116 (7%)
Frame = -1

Query: 364 KPSDSASVQVLPKAKRKSRRLAAEVSKDEIVQTDDV--------AILSLEDCDVEALQA- 212
K DSA + P + KS R+ EV ++E DD A S ++ + EA +A
Sbjct: 167 KRFDSAEPESEPVTEEKSERV--EVGEEEESSDDDAPEEVTTNEAAKSAKEKEKEATKAI 224

Query: 211 RDYQAVDVKDLLERMKKLQKQLQFWRTKNWAEKHTGQGHMIPLPTYNQFTKVDVAP 44
+ +A K E+ L++Q + K + +GQ M+P Q +KV++ P
Sbjct: 225 EEQEAASKKKRQEKAANLKRQAEISNKKRKLDVASGQDEMLPPA---QKSKVEITP 277