BP916546 |
Clone id |
YMU001_000088_H04 |
Library |
YMU01 |
Length |
559 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000088_H04. |
Accession |
BP916546 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL328Contig1 |
Sequence |
GGACACCTGTCCGAGAGTTGTAGTAGCACAGCATTCCCATATCAGGTGCAACATCCACTT TGGTAAACTGATTGTATGTGGGCAGTGGTATCATATGCCCTTGCCCCGTATGCTTCTCTG CCCAATTCTTAGTTCTCCAAAATTGTAGCTGCTTCTGCAACTTTTTCATTCTCTCCAATA AATCCTTCACATCGACAGCTTGATAATCACGTGCTTGGAGAGCCTCAACATCACAATCCT CCAGTGATAGAATTGCAACATCATCAGTCTGCACGATTTCATCTTTGCTCACTTCAGCGG CCAGCCTCCGAGACTTTCTTTTTGCTTTAGGCAGAACTTGTACAGATGCCGAATCAGACG GTTTCACGTCTAACACATTTATAGAGACCTTAGGTATGATTAGTTTGTTCTCGACACTGA CAAAATCACTTTCACTTTTAGAGGATCTTGAAGGCTCTGAGAAAATGGGCCTTCCCTCCA CTGATTGTCCTTTTGTATCAGAGCTCGTCGCCTTTGCACCCTCTTGCATCTGTACACCCT CAATCGCCGTCGATGCATT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q07E28 |
Definition |
sp|Q07E28|CTTB2_NEONE Cortactin-binding protein 2 OS=Neofelis nebulosa |
Align length |
95 |
Score (bit) |
32.0 |
E-value |
2.1 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP916546|Adiantum capillus-veneris mRNA, clone: YMU001_000088_H04. (559 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|Q07E28|CTTB2_NEONE Cortactin-binding protein 2 OS=Neofelis ne... 32 2.1 sp|Q9QVP9|FAK2_MOUSE Protein tyrosine kinase 2 beta OS=Mus muscu... 32 2.8 sp|A9FD62|LIPA_SORC5 Lipoyl synthase OS=Sorangium cellulosum (st... 31 3.6 sp|P70600|FAK2_RAT Protein tyrosine kinase 2 beta OS=Rattus norv... 31 3.6 sp|Q8CWX7|UVRB_STRMU UvrABC system protein B OS=Streptococcus mu... 31 4.7 sp|Q14289|FAK2_HUMAN Protein tyrosine kinase 2 beta OS=Homo sapi... 31 4.7 sp|Q7T019|DZIP1_DANRE Zinc finger protein Dzip1 OS=Danio rerio G... 30 6.2 sp|Q2QLA2|CTTB2_HORSE Cortactin-binding protein 2 OS=Equus cabal... 30 6.2 sp|A0M8T5|CTTB2_FELCA Cortactin-binding protein 2 OS=Felis silve... 30 6.2 sp|Q9I7U4|TITIN_DROME Titin OS=Drosophila melanogaster GN=sls PE... 30 8.1 sp|Q08156|KIT_CHICK Mast/stem cell growth factor receptor OS=Gal... 30 8.1 sp|Q07E41|CTTB2_DASNO Cortactin-binding protein 2 OS=Dasypus nov... 30 8.1
>sp|Q07E28|CTTB2_NEONE Cortactin-binding protein 2 OS=Neofelis nebulosa GN=CTTNBP2 PE=3 SV=1 Length = 1658
Score = 32.0 bits (71), Expect = 2.1 Identities = 24/95 (25%), Positives = 47/95 (49%), Gaps = 4/95 (4%) Frame = -1
Query: 415 VENKLIIPKVSINVLDVKPSDSASVQVLPKAKRKSRRLAAEVSKDEIVQTDDVAILSLED 236 +E + +V + + + K SA + L KR+S + A++ K LS D Sbjct: 186 IEEAQKLEEVMVKLEEEKTKTSALEEELSAEKRRSTEMEAQMEKQ----------LSEFD 235
Query: 235 CDVEALQAR----DYQAVDVKDLLERMKKLQKQLQ 143 + E L+A+ + D+K+ +++MKK+ +QL+ Sbjct: 236 TEREQLRAKLHREEAHTTDLKEEIDKMKKMIEQLK 270
>sp|Q9QVP9|FAK2_MOUSE Protein tyrosine kinase 2 beta OS=Mus musculus GN=Ptk2b PE=1 SV=1 Length = 1009
Score = 31.6 bits (70), Expect = 2.8 Identities = 27/79 (34%), Positives = 44/79 (55%), Gaps = 2/79 (2%) Frame = -1
Query: 403 LIIPKVSINVLDVKPSDSASVQVLPKAKRK--SRRLAAEVSKDEIVQTDDVAILSLEDCD 230 L + K+ +V D+ PS AS + + +K ++ LA ++K ++ Q + V LS EDC Sbjct: 915 LNLRKLIGSVDDLLPSLPASSRTEIEGTQKLLNKDLAELINKMKLAQQNAVTSLS-EDCK 973
Query: 229 VEALQARDYQAVDVKDLLE 173 + L A AVD K+LL+ Sbjct: 974 RQMLTASHTLAVDAKNLLD 992
>sp|A9FD62|LIPA_SORC5 Lipoyl synthase OS=Sorangium cellulosum (strain So ce56) GN=lipA PE=3 SV=1 Length = 372
Score = 31.2 bits (69), Expect = 3.6 Identities = 33/135 (24%), Positives = 60/135 (44%), Gaps = 4/135 (2%) Frame = -1
Query: 421 VSVENKLIIPKVSINVLDVKPSDSASVQVLPKAKRKSRRLAAEVSKDEIVQ----TDDVA 254 V N ++ +++ + DV+ S S+ VL +AK + RRLAA+ ++ T Sbjct: 159 VFAHNVEVVRRITRVIRDVRSSYDQSLAVLRRAKERQRRLAADAAEAGAPAPRRLTKSSI 218
Query: 253 ILSLEDCDVEALQARDYQAVDVKDLLERMKKLQKQLQFWRTKNWAEKHTGQGHMIPLPTY 74 ++ + + D E L+A ++DL E + Q+ R + KH + T+ Sbjct: 219 MVGIGETDDEVLEA-------LRDLREAGVDIVTIGQYLRP---SSKHAPVQRFVEPETF 268
Query: 73 NQFTKVDVAPDMGML 29 F + A +MG L Sbjct: 269 AAFER--AALEMGFL 281
>sp|P70600|FAK2_RAT Protein tyrosine kinase 2 beta OS=Rattus norvegicus GN=Ptk2b PE=1 SV=1 Length = 1009
Score = 31.2 bits (69), Expect = 3.6 Identities = 27/79 (34%), Positives = 43/79 (54%), Gaps = 2/79 (2%) Frame = -1
Query: 403 LIIPKVSINVLDVKPSDSASVQVLPKAKRK--SRRLAAEVSKDEIVQTDDVAILSLEDCD 230 L + K+ +V D+ PS AS + + +K ++ LA ++K + Q + V LS EDC Sbjct: 915 LNLRKLIGSVDDLLPSLPASSRTEIEGTQKLLNKDLAELINKMRLAQQNAVTSLS-EDCK 973
Query: 229 VEALQARDYQAVDVKDLLE 173 + L A AVD K+LL+ Sbjct: 974 RQMLTASHTLAVDAKNLLD 992
>sp|Q8CWX7|UVRB_STRMU UvrABC system protein B OS=Streptococcus mutans GN=uvrB PE=3 SV=1 Length = 663
Score = 30.8 bits (68), Expect = 4.7 Identities = 18/41 (43%), Positives = 25/41 (60%) Frame = -1
Query: 265 DDVAILSLEDCDVEALQARDYQAVDVKDLLERMKKLQKQLQ 143 D +AI D +V A +A DY A+ + E +KKLQKQ+Q Sbjct: 599 DLIAITKANDSEV-AEEAVDYNAMTKSERQEAIKKLQKQMQ 638
>sp|Q14289|FAK2_HUMAN Protein tyrosine kinase 2 beta OS=Homo sapiens GN=PTK2B PE=1 SV=2 Length = 1009
Score = 30.8 bits (68), Expect = 4.7 Identities = 25/79 (31%), Positives = 42/79 (53%), Gaps = 2/79 (2%) Frame = -1
Query: 403 LIIPKVSINVLDVKPS--DSASVQVLPKAKRKSRRLAAEVSKDEIVQTDDVAILSLEDCD 230 L + K+ +V D+ PS S+ ++ K ++ LA ++K + Q + V LS E+C Sbjct: 915 LTLRKLIGSVDDLLPSLPSSSRTEIEGTQKLLNKDLAELINKMRLAQQNAVTSLS-EECK 973
Query: 229 VEALQARDYQAVDVKDLLE 173 + L A AVD K+LL+ Sbjct: 974 RQMLTASHTLAVDAKNLLD 992
>sp|Q7T019|DZIP1_DANRE Zinc finger protein Dzip1 OS=Danio rerio GN=dzip1 PE=2 SV=2 Length = 898
Score = 30.4 bits (67), Expect = 6.2 Identities = 10/28 (35%), Positives = 20/28 (71%) Frame = -1
Query: 217 QARDYQAVDVKDLLERMKKLQKQLQFWR 134 Q +DY A K+L++R ++ ++QL+ W+ Sbjct: 272 QQKDYTAKQEKELIQRQEEFKRQLEIWK 299
>sp|Q2QLA2|CTTB2_HORSE Cortactin-binding protein 2 OS=Equus caballus GN=CTTNBP2 PE=3 SV=1 Length = 1665
Score = 30.4 bits (67), Expect = 6.2 Identities = 24/95 (25%), Positives = 46/95 (48%), Gaps = 4/95 (4%) Frame = -1
Query: 415 VENKLIIPKVSINVLDVKPSDSASVQVLPKAKRKSRRLAAEVSKDEIVQTDDVAILSLED 236 +E + +V + + K SA + L KR+S + A++ K LS D Sbjct: 186 IEEAQKLEEVMAKLEEEKKKTSALEEELSAEKRRSTEMEAQMEKQ----------LSEFD 235
Query: 235 CDVEALQAR----DYQAVDVKDLLERMKKLQKQLQ 143 + E L+A+ + D+K+ +++MKK+ +QL+ Sbjct: 236 TEREQLRAKLHREEAHTTDLKEEIDKMKKMIEQLK 270
>sp|A0M8T5|CTTB2_FELCA Cortactin-binding protein 2 OS=Felis silvestris catus GN=CTTNBP2 PE=3 SV=1 Length = 1658
Score = 30.4 bits (67), Expect = 6.2 Identities = 24/95 (25%), Positives = 46/95 (48%), Gaps = 4/95 (4%) Frame = -1
Query: 415 VENKLIIPKVSINVLDVKPSDSASVQVLPKAKRKSRRLAAEVSKDEIVQTDDVAILSLED 236 +E + +V + + K SA + L KR+S + A++ K LS D Sbjct: 186 IEEAQKLEEVMAKLEEEKTKTSALEEELSAEKRRSTEMEAQMEKQ----------LSEFD 235
Query: 235 CDVEALQAR----DYQAVDVKDLLERMKKLQKQLQ 143 + E L+A+ + D+K+ +++MKK+ +QL+ Sbjct: 236 TEREQLRAKLHREEAHTTDLKEEIDKMKKMIEQLK 270
>sp|Q9I7U4|TITIN_DROME Titin OS=Drosophila melanogaster GN=sls PE=1 SV=3 Length = 18141
Score = 30.0 bits (66), Expect = 8.1 Identities = 21/81 (25%), Positives = 40/81 (49%), Gaps = 1/81 (1%) Frame = -1
Query: 394 PKVSINVLDVKPSDSASVQVLP-KAKRKSRRLAAEVSKDEIVQTDDVAILSLEDCDVEAL 218 P INV+ ++ S ++ K K+KSR+ + KD++ D I L + ++ Sbjct: 12366 PFYEINVISSANTEGDSEEITTDKIKKKSRK----IKKDDL----DAYIQQLINAEIPVT 12417
Query: 217 QARDYQAVDVKDLLERMKKLQ 155 + Y+ +DV ++ KKL+ Sbjct: 12418 ELEKYEKIDVDGKAKKPKKLK 12438
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A4Y1N6 |
Definition |
tr|A4Y1N6|A4Y1N6_SHEPC Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) OS=Shewanella putrefaciens (strain CN-32 / ATCC BAA-453) |
Align length |
59 |
Score (bit) |
35.4 |
E-value |
2.1 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP916546|Adiantum capillus-veneris mRNA, clone: YMU001_000088_H04. (559 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A4Y1N6|A4Y1N6_SHEPC Diguanylate cyclase/phosphodiesterase wit... 35 2.1 tr|A1RPZ8|A1RPZ8_SHESW Diguanylate cyclase/phosphodiesterase wit... 35 2.1 tr|A2UXT9|A2UXT9_SHEPU Diguanylate cyclase/phosphodiesterase wit... 35 2.1 tr|Q7SYR8|Q7SYR8_XENLA Apacd-prov protein OS=Xenopus laevis GN=t... 35 3.6 tr|A3YB29|A3YB29_9GAMM Putative uncharacterized protein OS=Marin... 35 3.6 tr|B4JVF0|B4JVF0_DROGR GH22685 OS=Drosophila grimshawi GN=GH2268... 35 3.6 tr|Q7ZXC0|Q7ZXC0_XENLA Apacd-prov protein (Fragment) OS=Xenopus ... 34 6.2 tr|B5LEN7|B5LEN7_TRYBB ESAG2 type 8 (Fragment) OS=Trypanosoma br... 34 6.2 tr|B5LEN1|B5LEN1_TRYBB ESAG2 type 2 (Fragment) OS=Trypanosoma br... 34 6.2 tr|A6S734|A6S734_BOTFB Predicted protein OS=Botryotinia fuckelia... 34 6.2 tr|A4C2E1|A4C2E1_9FLAO Putative uncharacterized protein OS=Polar... 33 8.1
>tr|A4Y1N6|A4Y1N6_SHEPC Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) OS=Shewanella putrefaciens (strain CN-32 / ATCC BAA-453) GN=Sputcn32_0133 PE=3 SV=1 Length = 1077
Score = 35.4 bits (80), Expect = 2.1 Identities = 19/59 (32%), Positives = 30/59 (50%) Frame = +1
Query: 91 SYALAPYASLPNS*FSKIVAASATFSFSPINPSHRQLDNHVLGEPQHHNPPVIELQHHQ 267 S+AL+ A++ N IV A INP+ Q+ + L E + HNP ++ + HQ Sbjct: 505 SHALSRAAAVFNYSAEGIVVTDAENHIELINPAFTQITGYTLNEIKGHNPSILSAKRHQ 563
>tr|A1RPZ8|A1RPZ8_SHESW Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) OS=Shewanella sp. (strain W3-18-1) GN=Sputw3181_3939 PE=3 SV=1 Length = 1077
Score = 35.4 bits (80), Expect = 2.1 Identities = 19/59 (32%), Positives = 30/59 (50%) Frame = +1
Query: 91 SYALAPYASLPNS*FSKIVAASATFSFSPINPSHRQLDNHVLGEPQHHNPPVIELQHHQ 267 S+AL+ A++ N IV A INP+ Q+ + L E + HNP ++ + HQ Sbjct: 505 SHALSRAAAVFNYSAEGIVVTDAENHIELINPAFTQITGYTLNEIKGHNPSILSAKRHQ 563
>tr|A2UXT9|A2UXT9_SHEPU Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) OS=Shewanella putrefaciens 200 GN=Sput200DRAFT_0638 PE=3 SV=1 Length = 1077
Score = 35.4 bits (80), Expect = 2.1 Identities = 19/59 (32%), Positives = 30/59 (50%) Frame = +1
Query: 91 SYALAPYASLPNS*FSKIVAASATFSFSPINPSHRQLDNHVLGEPQHHNPPVIELQHHQ 267 S+AL+ A++ N IV A INP+ Q+ + L E + HNP ++ + HQ Sbjct: 505 SHALSRAAAVFNYSAEGIVVTDAENHIELINPAFTQITGYTLNEIKGHNPSILSAKRHQ 563
>tr|Q7SYR8|Q7SYR8_XENLA Apacd-prov protein OS=Xenopus laevis GN=txndc9 PE=2 SV=1 Length = 226
Score = 34.7 bits (78), Expect = 3.6 Identities = 25/95 (26%), Positives = 50/95 (52%), Gaps = 2/95 (2%) Frame = -1
Query: 298 AEVSKDEIVQTDDVAILSLEDCDVEALQARDYQAVDV--KDLLERMKKLQKQLQFWRTKN 125 A+V +++++QT + L D ++E L D +++ + LE +KK+QKQ Q W +K Sbjct: 11 AKVMENQLLQTAKIMEEQL-DAELEKLDKTDEDEMELLKERRLEALKKVQKQKQEWLSK- 68
Query: 124 WAEKHTGQGHMIPLPTYNQFTKVDVAPDMGMLCYY 20 G G +P+ +F + +V ++C++ Sbjct: 69 ------GHGEYREIPSEREFFQ-EVKESKNVVCHF 96
>tr|A3YB29|A3YB29_9GAMM Putative uncharacterized protein OS=Marinomonas sp. MED121 GN=MED121_08703 PE=4 SV=1 Length = 82
Score = 34.7 bits (78), Expect = 3.6 Identities = 22/61 (36%), Positives = 36/61 (59%) Frame = -1
Query: 325 AKRKSRRLAAEVSKDEIVQTDDVAILSLEDCDVEALQARDYQAVDVKDLLERMKKLQKQL 146 +K S+ + A+V + D + ++S ED DV+A Y+ V +L ERM+KL++QL Sbjct: 21 SKLPSKEIQAQVQQLAKSTLDKMDLVSREDFDVQAAMLAKYRE-RVIELEERMQKLEQQL 79
Query: 145 Q 143 Q Sbjct: 80 Q 80
>tr|B4JVF0|B4JVF0_DROGR GH22685 OS=Drosophila grimshawi GN=GH22685 PE=4 SV=1 Length = 335
Score = 34.7 bits (78), Expect = 3.6 Identities = 25/104 (24%), Positives = 48/104 (46%), Gaps = 3/104 (2%) Frame = -1
Query: 346 SVQVLPKAKRKSRRLAAEVSKDEIVQTDDVAILSLEDCDVEALQARDYQAVDVKDLLERM 167 S+Q + +++S L SKD ++Q+ ++ + RD A++ KDLL+ M Sbjct: 180 SLQSYAQKEQRSSHLDRRASKDALLQSRHYIFTEARSVSLDRFKRRDDLAIESKDLLKIM 239
Query: 166 KK---LQKQLQFWRTKNWAEKHTGQGHMIPLPTYNQFTKVDVAP 44 +K + + + + +E G+ +PL + V VAP Sbjct: 240 RKQSTIAEPARIYHPAKLSEPIRGRRLSVPLSI--NYQTVHVAP 281
>tr|Q7ZXC0|Q7ZXC0_XENLA Apacd-prov protein (Fragment) OS=Xenopus laevis GN=apacd-prov PE=2 SV=1 Length = 263
Score = 33.9 bits (76), Expect = 6.2 Identities = 25/95 (26%), Positives = 49/95 (51%), Gaps = 2/95 (2%) Frame = -1
Query: 298 AEVSKDEIVQTDDVAILSLEDCDVEALQARDYQAVDV--KDLLERMKKLQKQLQFWRTKN 125 A+V +++++QT + L D ++E L D +++ + LE +KK QKQ Q W +K Sbjct: 48 AKVMENQLLQTAKIMEEQL-DAELEKLDKTDEDEMELLKERRLEALKKAQKQKQEWLSK- 105
Query: 124 WAEKHTGQGHMIPLPTYNQFTKVDVAPDMGMLCYY 20 G G +P+ +F + +V ++C++ Sbjct: 106 ------GHGEYREIPSEREFFQ-EVKESKNVVCHF 133
>tr|B5LEN7|B5LEN7_TRYBB ESAG2 type 8 (Fragment) OS=Trypanosoma brucei brucei PE=4 SV=1 Length = 485
Score = 33.9 bits (76), Expect = 6.2 Identities = 24/83 (28%), Positives = 44/83 (53%), Gaps = 1/83 (1%) Frame = -1
Query: 334 LPKAKRKSRRLAAEV-SKDEIVQTDDVAILSLEDCDVEALQARDYQAVDVKDLLERMKKL 158 LP+ K+R E+ SK E + + A S +D + + YQ +++ L E+ KKL Sbjct: 74 LPQPSFKNREKEGEIMSKLEEMVREVEAAGSTQDLSHSSNRTTAYQ--EIRKLFEKAKKL 131
Query: 157 QKQLQFWRTKNWAEKHTGQGHMI 89 +++++ RTK H+ Q +M+ Sbjct: 132 KEEIEVNRTKALNASHSAQENML 154
>tr|B5LEN1|B5LEN1_TRYBB ESAG2 type 2 (Fragment) OS=Trypanosoma brucei brucei PE=4 SV=1 Length = 454
Score = 33.9 bits (76), Expect = 6.2 Identities = 24/83 (28%), Positives = 44/83 (53%), Gaps = 1/83 (1%) Frame = -1
Query: 334 LPKAKRKSRRLAAEV-SKDEIVQTDDVAILSLEDCDVEALQARDYQAVDVKDLLERMKKL 158 LP+ K+R E+ SK E + + A S +D + + YQ +++ L E+ KKL Sbjct: 74 LPQPSFKNREKEGEIMSKLEEMVREVEAAGSTQDLSHSSNRTTAYQ--EIRKLFEKAKKL 131
Query: 157 QKQLQFWRTKNWAEKHTGQGHMI 89 +++++ RTK H+ Q +M+ Sbjct: 132 KEEIEVNRTKALNASHSAQENML 154
>tr|A6S734|A6S734_BOTFB Predicted protein OS=Botryotinia fuckeliana (strain B05.10) GN=BC1G_08609 PE=4 SV=1 Length = 428
Score = 33.9 bits (76), Expect = 6.2 Identities = 32/116 (27%), Positives = 53/116 (45%), Gaps = 9/116 (7%) Frame = -1
Query: 364 KPSDSASVQVLPKAKRKSRRLAAEVSKDEIVQTDDV--------AILSLEDCDVEALQA- 212 K DSA + P + KS R+ EV ++E DD A S ++ + EA +A Sbjct: 167 KRFDSAEPESEPVTEEKSERV--EVGEEEESSDDDAPEEVTTNEAAKSAKEKEKEATKAI 224
Query: 211 RDYQAVDVKDLLERMKKLQKQLQFWRTKNWAEKHTGQGHMIPLPTYNQFTKVDVAP 44 + +A K E+ L++Q + K + +GQ M+P Q +KV++ P Sbjct: 225 EEQEAASKKKRQEKAANLKRQAEISNKKRKLDVASGQDEMLPPA---QKSKVEITP 277
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