BP916555
Clone id YMU001_000089_A03
Library
Length 480
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000089_A03.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
TTTTTTAGAGTAAAATCCTTCAAACATATATATAAAACCTTGTAAAGTTACACAACGGCT
GAACATTTGGCAGATTATACAAGCCTGTCACACTAGGTCGCAATGGCACAGCTTGCCACA
TGTACACCACGTTACTCAGAAGATTCAAAAGATGTCAACTTCTCAGACAATCTTACTTCA
TATCTGTGCATACAAGTCACGACAACCATTATCCTGCGCTCGTCGACCCTAGCCATACGA
TAATGCTTTCCCATAGAAGCCAATGCAGACTAAGCAAACACAGTTTTTCTGAAAAATTCT
ACACCACAAACTACACTGACCAAAAAAAACAATAGTATACTAAAACGAGTCCTAAGATTA
GCATAAGCTAACAAATGTCTTCCCTCAGTATTGCATGAGCACCATCTTGGTGCTCCCAGC
TTGCCTGGGCCAATCAGCTCCTTGACTGAGCCAGGCAAGAACTGCTGGAATGCTTATAAT
■■Homology search results ■■ -
sp_hit_id Q6CP50
Definition sp|Q6CP50|TRM13_KLULA tRNA guanosine-2'-O-methyltransferase TRM13 OS=Kluyveromyces lactis
Align length 59
Score (bit) 37.0
E-value 0.046
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP916555|Adiantum capillus-veneris mRNA, clone:
YMU001_000089_A03.
(480 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q6CP50|TRM13_KLULA tRNA guanosine-2'-O-methyltransferase TRM1... 37 0.046
sp|Q5E0X7|GLPB_VIBF1 Anaerobic glycerol-3-phosphate dehydrogenas... 30 4.3
sp|P47043|ZAP1_YEAST Zinc-responsive transcriptional regulator Z... 29 9.6

>sp|Q6CP50|TRM13_KLULA tRNA guanosine-2'-O-methyltransferase TRM13
OS=Kluyveromyces lactis GN=TRM13 PE=3 SV=1
Length = 434

Score = 37.0 bits (84), Expect = 0.046
Identities = 19/59 (32%), Positives = 33/59 (55%), Gaps = 6/59 (10%)
Frame = +3

Query: 132 LLRRFKRCQLLRQ--SYFISVHTSHDNHYPALVDPSHTIMLS----HRSQCRLSKHSFS 290
L+++ ++C + R+ S F S H++ + P +DPSHT+ LS H +C +H S
Sbjct: 24 LVKKKRQCGMTRRAGSQFCSEHSTDSDRVPCPLDPSHTVCLSKMRVHMRKCNKFRHDVS 82


>sp|Q5E0X7|GLPB_VIBF1 Anaerobic glycerol-3-phosphate dehydrogenase
subunit B OS=Vibrio fischeri (strain ATCC 700601 /
ES114) GN=glpB PE=3 SV=1
Length = 455

Score = 30.4 bits (67), Expect = 4.3
Identities = 14/50 (28%), Positives = 25/50 (50%)
Frame = +2

Query: 59 LNIWQIIQACHTRSQWHSLPHVHHVTQKIQKMSTSQTILLHICAYKSRQP 208
LN +++ +S W S P VH ++K T + +L+ I ++ QP
Sbjct: 109 LNHYRLTPLGTMKSTWLSQPFVHQFPMDLEKNKTQKMVLITIDGFRDFQP 158


>sp|P47043|ZAP1_YEAST Zinc-responsive transcriptional regulator ZAP1
OS=Saccharomyces cerevisiae GN=ZAP1 PE=1 SV=1
Length = 880

Score = 29.3 bits (64), Expect = 9.6
Identities = 16/59 (27%), Positives = 27/59 (45%)
Frame = +2

Query: 41 CKVTQRLNIWQIIQACHTRSQWHSLPHVHHVTQKIQKMSTSQTILLHICAYKSRQPLSC 217
CK +R + HTR+ P+ H+ K K + S ++ +HI + +PL C
Sbjct: 770 CKTCKRCFSSEETLVQHTRTHSGEKPYKCHICNK--KFAISSSLKIHIRTHTGEKPLQC 826


tr_hit_id Q86FD9
Definition tr|Q86FD9|Q86FD9_SCHJA Clone ZZD1506 mRNA sequence. (Fragment) OS=Schistosoma japonicum
Align length 77
Score (bit) 36.6
E-value 0.64
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP916555|Adiantum capillus-veneris mRNA, clone:
YMU001_000089_A03.
(480 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q86FD9|Q86FD9_SCHJA Clone ZZD1506 mRNA sequence. (Fragment) O... 37 0.64
tr|Q5DB96|Q5DB96_SCHJA SJCHGC06873 protein OS=Schistosoma japoni... 37 0.64
tr|B5RTW2|B5RTW2_DEBHA DEHA2E05632p OS=Debaryomyces hansenii GN=... 35 2.4
tr|Q95QV2|Q95QV2_CAEEL Cystic fibrosis transmembrane conductance... 34 3.2
tr|A7QKK1|A7QKK1_VITVI Chromosome chr2 scaffold_112, whole genom... 34 4.1
tr|A5DQK8|A5DQK8_PICGU Putative uncharacterized protein OS=Pichi... 33 5.4
tr|A8X988|A8X988_CAEBR CBR-CFT-1 protein OS=Caenorhabditis brigg... 33 9.2

>tr|Q86FD9|Q86FD9_SCHJA Clone ZZD1506 mRNA sequence. (Fragment)
OS=Schistosoma japonicum PE=2 SV=1
Length = 327

Score = 36.6 bits (83), Expect = 0.64
Identities = 25/77 (32%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
Frame = +3

Query: 39 LVKLHNG*TFGRLYKPVTLGRNGTACHMYTTLLRRFKR-CQLLRQSYFISVHTSHDNHYP 215
LVK HN + L + +T + T C++ T L+RF++ LL+Q I H S++
Sbjct: 37 LVKYHNTGVYYNLVESITFIHSYTCCYILTDALKRFEQSLTLLKQYPKIPAHLSNNT--- 93

Query: 216 ALVDPSHTIMLSHRSQC 266
HTI++S S C
Sbjct: 94 -----IHTILISISSGC 105


>tr|Q5DB96|Q5DB96_SCHJA SJCHGC06873 protein OS=Schistosoma japonicum
PE=2 SV=1
Length = 524

Score = 36.6 bits (83), Expect = 0.64
Identities = 25/77 (32%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
Frame = +3

Query: 39 LVKLHNG*TFGRLYKPVTLGRNGTACHMYTTLLRRFKR-CQLLRQSYFISVHTSHDNHYP 215
LVK HN + L + +T + T C++ T L+RF++ LL+Q I H S++
Sbjct: 29 LVKYHNTGVYYNLVESITFIHSYTCCYILTDALKRFEQSLTLLKQYPKIPAHLSNNT--- 85

Query: 216 ALVDPSHTIMLSHRSQC 266
HTI++S S C
Sbjct: 86 -----IHTILISISSGC 97


>tr|B5RTW2|B5RTW2_DEBHA DEHA2E05632p OS=Debaryomyces hansenii
GN=DEHA2E05632g PE=4 SV=1
Length = 1184

Score = 34.7 bits (78), Expect = 2.4
Identities = 25/82 (30%), Positives = 40/82 (48%)
Frame = -2

Query: 410 PRWCSCNTEGRHLLAYANLRTRFSILLFFLVSVVCGVEFFRKTVFA*SALASMGKHYRMA 231
P W CN +G+ LL A+L+ R+S L+ FL++ C ++ LASM + M
Sbjct: 731 PNWQLCNGQGQTLLHLASLK-RYSQLIKFLITHGCKIDVKDNQGLTPLFLASMCGYRDM- 788

Query: 230 RVDERRIMVVVTCMHRYEVRLS 165
I + V C + ++LS
Sbjct: 789 ------IQIFVACKSNWNLKLS 804


>tr|Q95QV2|Q95QV2_CAEEL Cystic fibrosis transmembrane conductance
regulator homolog protein 1 OS=Caenorhabditis elegans
GN=cft-1 PE=2 SV=1
Length = 1247

Score = 34.3 bits (77), Expect = 3.2
Identities = 18/52 (34%), Positives = 24/52 (46%)
Frame = +2

Query: 32 IKPCKVTQRLNIWQIIQACHTRSQWHSLPHVHHVTQKIQKMSTSQTILLHIC 187
I PC +IW I+AC R SLP H +KMS Q +++C
Sbjct: 1107 IDPCCQFADSDIWLAIEACQLREYVKSLPDGLHQMVSPEKMSNEQKCQVNVC 1158


>tr|A7QKK1|A7QKK1_VITVI Chromosome chr2 scaffold_112, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00001148001
PE=4 SV=1
Length = 393

Score = 33.9 bits (76), Expect = 4.1
Identities = 16/43 (37%), Positives = 22/43 (51%)
Frame = +3

Query: 78 YKPVTLGRNGTACHMYTTLLRRFKRCQLLRQSYFISVHTSHDN 206
YKPV +G G C M T +RR + L+R + +H S N
Sbjct: 104 YKPVKMGLEGGGCPMGTVPIRRTTKDDLIRAKLYSEMHASKIN 146


>tr|A5DQK8|A5DQK8_PICGU Putative uncharacterized protein OS=Pichia
guilliermondii GN=PGUG_05559 PE=4 SV=2
Length = 1113

Score = 33.5 bits (75), Expect = 5.4
Identities = 23/82 (28%), Positives = 38/82 (46%)
Frame = -2

Query: 410 PRWCSCNTEGRHLLAYANLRTRFSILLFFLVSVVCGVEFFRKTVFA*SALASMGKHYRMA 231
P W CN +G+ LL A+++ +S L+ FL++ C V+ AS+G H +
Sbjct: 723 PNWQLCNKQGQALLHLASMK-NYSSLIKFLIAHGCKVDIQDNQGLTPLFFASLGGHREL- 780

Query: 230 RVDERRIMVVVTCMHRYEVRLS 165
I V C + ++LS
Sbjct: 781 ------IKTFVQCKCNWNMKLS 796


>tr|A8X988|A8X988_CAEBR CBR-CFT-1 protein OS=Caenorhabditis briggsae
GN=Cbr-cft-1 PE=3 SV=2
Length = 1272

Score = 32.7 bits (73), Expect = 9.2
Identities = 17/52 (32%), Positives = 23/52 (44%)
Frame = +2

Query: 32 IKPCKVTQRLNIWQIIQACHTRSQWHSLPHVHHVTQKIQKMSTSQTILLHIC 187
I PC +IW I+AC R SLP H Q M+ Q +++C
Sbjct: 1132 IDPCCQFADSDIWLAIEACQLREYVKSLPDGLHQMVSSQSMNNEQKSQINVC 1183