BP916556 |
Clone id |
YMU001_000089_A04 |
Library |
YMU01 |
Length |
467 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000089_A04. |
Accession |
BP916556 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
AATCAAAGATATATTTCAAATCTTACCCTTCCATTGTTCAAGGATAATGGCTCCCCTCTG TAAATGATTGCAATACATTTGAATGCCTTAATGTACACACAAATACAATTCTCAGGATTG ACTGCATAGTTTATTTTCATTGATCTCTTTCTGTTCACAAAATTAGCTGATCATCAGGTG AAAGCATCGGCACATGGGCACTTTTCAACACAATTCAAATCTGGTTCTTATTGCAGTTTT GGCCAACATTGTCATCCTGTTGATAACGGTACTGCTTCACTGATAAGAACCTTGCTTCCT TCCATGTCCCTTCTCAGGGCTTCAATGACTTGTGCATCCTCTTGCTTGCCTGCGGCCGCA TAGATATCCGCCATAAGCACATAAGGTACAGCATCGTGCTTATCTATTTGTTTTGCTTGT TCGAATGCCCACTTCCCAACATTAACATCTCCCCATTTCCTACAGGC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9CAA8 |
Definition |
sp|Q9CAA8|PP108_ARATH Putative pentatricopeptide repeat-containing protein At1g68930 OS=Arabidopsis thaliana |
Align length |
60 |
Score (bit) |
47.4 |
E-value |
3.0e-05 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A7NVQ5 |
Definition |
tr|A7NVQ5|A7NVQ5_VITVI Chromosome chr18 scaffold_1, whole genome shotgun sequence OS=Vitis vinifera |
Align length |
54 |
Score (bit) |
46.2 |
E-value |
0.0008 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP916556|Adiantum capillus-veneris mRNA, clone: YMU001_000089_A04. (467 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A7NVQ5|A7NVQ5_VITVI Chromosome chr18 scaffold_1, whole genome... 46 8e-04 tr|B3U1U3|B3U1U3_ISOEN Pentatricopeptide repeat protein (Fragmen... 46 0.001 tr|A7QYW3|A7QYW3_VITVI Chromosome undetermined scaffold_257, who... 45 0.001 tr|A7Q4W0|A7Q4W0_VITVI Non-specific lipid-transfer protein OS=Vi... 45 0.001 tr|A7PXY9|A7PXY9_VITVI Chromosome chr15 scaffold_37, whole genom... 45 0.002 tr|A5BWE3|A5BWE3_VITVI Putative uncharacterized protein OS=Vitis... 45 0.002 tr|A7Q7X5|A7Q7X5_VITVI Chromosome chr18 scaffold_61, whole genom... 45 0.002 tr|A7PEJ0|A7PEJ0_VITVI Chromosome chr11 scaffold_13, whole genom... 45 0.002 tr|A5BGJ8|A5BGJ8_VITVI Putative uncharacterized protein OS=Vitis... 45 0.002 tr|A3BIE4|A3BIE4_ORYSJ Putative uncharacterized protein OS=Oryza... 44 0.003 tr|A2YK17|A2YK17_ORYSI Putative uncharacterized protein OS=Oryza... 44 0.003 tr|Q9M2E7|Q9M2E7_ARATH Putative uncharacterized protein T20K12.7... 44 0.004 tr|Q9LFW4|Q9LFW4_ARATH PCMP-H2 protein (Fragment) OS=Arabidopsis... 44 0.004 tr|A7R678|A7R678_VITVI Chromosome undetermined scaffold_1179, wh... 44 0.004 tr|A7R1A1|A7R1A1_VITVI Chromosome undetermined scaffold_342, who... 44 0.004 tr|A5BL66|A5BL66_VITVI Putative uncharacterized protein OS=Vitis... 44 0.004 tr|A5BIR2|A5BIR2_VITVI Putative uncharacterized protein OS=Vitis... 44 0.004 tr|Q6Z0F9|Q6Z0F9_ORYSJ Os08g0340900 protein OS=Oryza sativa subs... 44 0.005 tr|Q60EM0|Q60EM0_ORYSJ Os05g0455900 protein OS=Oryza sativa subs... 44 0.005 tr|B8B9V6|B8B9V6_ORYSI Putative uncharacterized protein OS=Oryza... 44 0.005 tr|A7QIJ2|A7QIJ2_VITVI Chromosome chr9 scaffold_104, whole genom... 44 0.005 tr|A7PNA8|A7PNA8_VITVI Chromosome chr1 scaffold_22, whole genome... 44 0.005 tr|A7PFZ2|A7PFZ2_VITVI Chromosome chr6 scaffold_15, whole genome... 44 0.005 tr|A3BS46|A3BS46_ORYSJ Putative uncharacterized protein OS=Oryza... 44 0.005 tr|A2Y5C6|A2Y5C6_ORYSI Putative uncharacterized protein OS=Oryza... 44 0.005 tr|A9RJW2|A9RJW2_PHYPA Predicted protein OS=Physcomitrella paten... 43 0.007 tr|A7QGY9|A7QGY9_VITVI Chromosome chr3 scaffold_95, whole genome... 43 0.007 tr|Q7F2F8|Q7F2F8_ORYSJ P0402A09.8 protein (P0455C04.2 protein) O... 43 0.009 tr|Q655L5|Q655L5_ORYSJ Putative uncharacterized protein P0672D08... 43 0.009 tr|B8ACR8|B8ACR8_ORYSI Putative uncharacterized protein OS=Oryza... 43 0.009
>tr|A7NVQ5|A7NVQ5_VITVI Chromosome chr18 scaffold_1, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00015527001 PE=4 SV=1 Length = 637
Score = 46.2 bits (108), Expect = 8e-04 Identities = 21/54 (38%), Positives = 34/54 (62%) Frame = -1
Query: 467 ACRKWGDVNVGKWAFEQAKQIDKHDAVPYVLMADIYAAAGKQEDAQVIEALRRD 306 ACR +G+V +GK EQ +D D Y+++++IY+AAG DA + AL ++ Sbjct: 443 ACRVYGNVELGKEVAEQLLSLDPSDHRNYIMLSNIYSAAGLWRDASKVRALMKE 496
>tr|B3U1U3|B3U1U3_ISOEN Pentatricopeptide repeat protein (Fragment) OS=Isoetes engelmannii GN=PPR PE=4 SV=1 Length = 155
Score = 45.8 bits (107), Expect = 0.001 Identities = 23/53 (43%), Positives = 33/53 (62%) Frame = -1
Query: 467 ACRKWGDVNVGKWAFEQAKQIDKHDAVPYVLMADIYAAAGKQEDAQVIEALRR 309 ACR +G V +G+ F Q ID + A YVLM+ IY+ +G E+A I+ LR+ Sbjct: 7 ACRTYGHVELGRRCFNQVVPIDPYHAGAYVLMSGIYSDSGLWEEALKIDELRQ 59
>tr|A7QYW3|A7QYW3_VITVI Chromosome undetermined scaffold_257, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00010363001 PE=4 SV=1 Length = 372
Score = 45.4 bits (106), Expect = 0.001 Identities = 22/59 (37%), Positives = 39/59 (66%) Frame = -1
Query: 464 CRKWGDVNVGKWAFEQAKQIDKHDAVPYVLMADIYAAAGKQEDAQVIEALRRDMEGSKV 288 CRK G+ + K A + K++D ++++ YVLM++I+ G+ +A++I RR+MEG V Sbjct: 175 CRKHGETKLAKLAAVKLKELDPNNSLGYVLMSNIFCTDGRFNEARLI---RREMEGKTV 230
>tr|A7Q4W0|A7Q4W0_VITVI Non-specific lipid-transfer protein OS=Vitis vinifera GN=GSVIVT00029872001 PE=3 SV=1 Length = 897
Score = 45.4 bits (106), Expect = 0.001 Identities = 18/51 (35%), Positives = 35/51 (68%) Frame = -1
Query: 467 ACRKWGDVNVGKWAFEQAKQIDKHDAVPYVLMADIYAAAGKQEDAQVIEAL 315 +CR + DV++ + A E+ +D ++ PYVL+A+IY++ G+ +DA+ + L Sbjct: 698 SCRVYADVSLARRAAEELFHLDPQNSAPYVLLANIYSSLGRWDDAKAVREL 748
>tr|A7PXY9|A7PXY9_VITVI Chromosome chr15 scaffold_37, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00026234001 PE=4 SV=1 Length = 748
Score = 45.1 bits (105), Expect = 0.002 Identities = 20/45 (44%), Positives = 33/45 (73%) Frame = -1
Query: 467 ACRKWGDVNVGKWAFEQAKQIDKHDAVPYVLMADIYAAAGKQEDA 333 ACR G+V +G+ A +++ +AVPYVL++++Y+AAGK E+A Sbjct: 554 ACRVHGNVELGERAANNLFELEPKNAVPYVLLSNLYSAAGKWEEA 598
>tr|A5BWE3|A5BWE3_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_002466 PE=4 SV=1 Length = 440
Score = 45.1 bits (105), Expect = 0.002 Identities = 20/45 (44%), Positives = 33/45 (73%) Frame = -1
Query: 467 ACRKWGDVNVGKWAFEQAKQIDKHDAVPYVLMADIYAAAGKQEDA 333 ACR G+V +G+ A +++ +AVPYVL++++Y+AAGK E+A Sbjct: 246 ACRVHGNVELGERAANNLFELEPKNAVPYVLLSNLYSAAGKWEEA 290
>tr|A7Q7X5|A7Q7X5_VITVI Chromosome chr18 scaffold_61, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00032037001 PE=4 SV=1 Length = 653
Score = 44.7 bits (104), Expect = 0.002 Identities = 22/59 (37%), Positives = 39/59 (66%) Frame = -1
Query: 464 CRKWGDVNVGKWAFEQAKQIDKHDAVPYVLMADIYAAAGKQEDAQVIEALRRDMEGSKV 288 CRK G+ + K A + K++D ++++ YVLM++I+ G+ +A++I RR+MEG V Sbjct: 456 CRKHGETKLAKLAAVKLKELDPNNSLGYVLMSNIFCTDGRFNEARLI---RREMEGKIV 511
>tr|A7PEJ0|A7PEJ0_VITVI Chromosome chr11 scaffold_13, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00016683001 PE=4 SV=1 Length = 695
Score = 44.7 bits (104), Expect = 0.002 Identities = 19/53 (35%), Positives = 34/53 (64%) Frame = -1
Query: 464 CRKWGDVNVGKWAFEQAKQIDKHDAVPYVLMADIYAAAGKQEDAQVIEALRRD 306 CR DVN G+ A ++D H+A PY+++++IYAA G+ +D + +L ++ Sbjct: 501 CRINCDVNNGEMAARHLFELDPHNAGPYIMLSNIYAACGRWKDVAAVRSLMKN 553
>tr|A5BGJ8|A5BGJ8_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_012312 PE=4 SV=1 Length = 420
Score = 44.7 bits (104), Expect = 0.002 Identities = 19/53 (35%), Positives = 34/53 (64%) Frame = -1
Query: 464 CRKWGDVNVGKWAFEQAKQIDKHDAVPYVLMADIYAAAGKQEDAQVIEALRRD 306 CR DVN G+ A ++D H+A PY+++++IYAA G+ +D + +L ++ Sbjct: 189 CRINCDVNNGEMAARHLFELDPHNAGPYIMLSNIYAACGRWKDVAAVRSLMKN 241
>tr|A3BIE4|A3BIE4_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_022816 PE=4 SV=1 Length = 484
Score = 44.3 bits (103), Expect = 0.003 Identities = 20/60 (33%), Positives = 35/60 (58%) Frame = -1
Query: 467 ACRKWGDVNVGKWAFEQAKQIDKHDAVPYVLMADIYAAAGKQEDAQVIEALRRDMEGSKV 288 ACR G++ KWA + + D + Y+L+++ YAAAG + + ++ R+M G+KV Sbjct: 358 ACRMRGNIESAKWAASRLFSLKPDDPINYLLISNTYAAAGDWNELAKVRSVMRNMCGNKV 417
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