BP916558 |
Clone id |
YMU001_000089_A06 |
Library |
YMU01 |
Length |
543 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000089_A06. |
Accession |
BP916558 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
CTACCGACCACACCACTCTTTGCCGTTTACACTACACAAGTGATCTTCATCTTCATTAGC ACTGTCCTCATCTAAACACCCCATTCTCTTCCTTTGGGTTGTGCAACATGTGTCCCATCG CGTGTTCCATCTAAGGTCATATCAAGTTCTTCAAGATTTGTTCTTTCTCCCTCTCTATCT TGAGCATCAGGTCCAATTTTAGACACCTTCGCTAGCGTATGTTGCTTCCTCACCACATGT TGCCAGATATTCTGAAGCTCTTCCAATCTTACTGGCTTGAGCAAGTAATCGCAGGCCCCT TCTGAGATTCCTTTCATTACATTGCTGGTATCCCCATTGGCTGACATCATGATAACAGGG ACATCCATCTCCAAGCGAACCAGCTCAAGAAGCTTGAATCCATCCATGTGGGGCATGTAC ACGTCACTCAGGACTACATCAAACCTGCTTTTGTTCTCTCGCAGCATGGCAAGCGCCATA ACCGCCTGCTCACAAGTCGTTACTTGATACAGACAGCTACGAAGTAGCCGCTCAACAATA AGA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P62598 |
Definition |
sp|P62598|ARR12_ARATH Two-component response regulator ARR12 OS=Arabidopsis thaliana |
Align length |
124 |
Score (bit) |
155.0 |
E-value |
1.0e-37 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9S224 |
Definition |
tr|A9S224|A9S224_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens |
Align length |
135 |
Score (bit) |
162.0 |
E-value |
1.0e-38 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP916558|Adiantum capillus-veneris mRNA, clone: YMU001_000089_A06. (543 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9S224|A9S224_PHYPA Predicted protein (Fragment) OS=Physcomit... 162 1e-38 tr|A9RVL9|A9RVL9_PHYPA Predicted protein (Fragment) OS=Physcomit... 160 4e-38 tr|A9RHS9|A9RHS9_PHYPA Predicted protein OS=Physcomitrella paten... 160 4e-38 tr|Q9AV93|Q9AV93_MAIZE Two-component response regulator ARR1 OS=... 160 5e-38 tr|A8I580|A8I580_CHLRE Predicted protein (Fragment) OS=Chlamydom... 159 9e-38 tr|Q948L2|Q948L2_MAIZE Response regulator 10 OS=Zea mays GN=ZmRR... 157 3e-37 tr|Q6H805|Q6H805_ORYSJ Os02g0182100 protein OS=Oryza sativa subs... 157 4e-37 tr|Q5SML5|Q5SML5_ORYSJ Os06g0183100 protein OS=Oryza sativa subs... 157 4e-37 tr|B8B3I4|B8B3I4_ORYSI Putative uncharacterized protein OS=Oryza... 157 4e-37 tr|A7P3W0|A7P3W0_VITVI Chromosome chr1 scaffold_5, whole genome ... 157 4e-37 tr|A3B911|A3B911_ORYSJ Putative uncharacterized protein OS=Oryza... 157 4e-37 tr|A3A3U1|A3A3U1_ORYSJ Putative uncharacterized protein OS=Oryza... 157 4e-37 tr|A2X1N2|A2X1N2_ORYSI Putative uncharacterized protein OS=Oryza... 157 4e-37 tr|Q8H7S7|Q8H7S7_ORYSJ Os03g0224200 protein OS=Oryza sativa subs... 156 8e-37 tr|A2XE31|A2XE31_ORYSI Putative uncharacterized protein OS=Oryza... 156 8e-37 tr|Q94LW1|Q94LW1_MAIZE Response regulator 9 OS=Zea mays GN=ZmRR9... 155 1e-36 tr|A7P5Y3|A7P5Y3_VITVI Chromosome chr4 scaffold_6, whole genome ... 155 1e-36 tr|A5BGD4|A5BGD4_VITVI Putative uncharacterized protein OS=Vitis... 155 1e-36 tr|Q5N6V8|Q5N6V8_ORYSJ Putative response regulator 11 OS=Oryza s... 155 1e-36 tr|B8A7T0|B8A7T0_ORYSI Putative uncharacterized protein OS=Oryza... 155 1e-36 tr|A1A6A7|A1A6A7_ORYSJ Response regulator OS=Oryza sativa subsp.... 155 1e-36 tr|Q6K8X6|Q6K8X6_ORYSJ Os02g0796500 protein OS=Oryza sativa subs... 155 2e-36 tr|B8AEH1|B8AEH1_ORYSI Putative uncharacterized protein OS=Oryza... 155 2e-36 tr|B6UC09|B6UC09_MAIZE Two-component response regulator ARR11 OS... 155 2e-36 tr|A3ACA1|A3ACA1_ORYSJ Putative uncharacterized protein OS=Oryza... 155 2e-36 tr|Q682I9|Q682I9_ARATH Putative uncharacterized protein At4g1611... 153 5e-36 tr|Q680A8|Q680A8_ARATH Putative uncharacterized protein At4g1611... 153 5e-36 tr|Q15FC9|Q15FC9_STRAF SRR391 OS=Striga asiatica PE=2 SV=1 153 5e-36 tr|A7R0P8|A7R0P8_VITVI Chromosome undetermined scaffold_314, who... 153 5e-36 tr|A7Q8K8|A7Q8K8_VITVI Chromosome chr5 scaffold_64, whole genome... 153 5e-36
>tr|A9S224|A9S224_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_123034 PE=4 SV=1 Length = 262
Score = 162 bits (410), Expect = 1e-38 Identities = 82/135 (60%), Positives = 99/135 (73%) Frame = -2
Query: 539 IVERLLRSCLYQVTTCEQAVMALAMLRENKSRFDVVLSDVYMPHMDGFKLLELVRLEMDV 360 I+ER+LR C Y VTTC A ALAMLREN+S FD+V+SDVYMP MDGFKLLE + LE+D+ Sbjct: 29 ILERMLRECKYAVTTCNSATKALAMLRENRSYFDLVISDVYMPDMDGFKLLEAIGLELDL 88
Query: 359 PVIMMSANGDTSNVMKGISEGACDYLLKPVRLEELQNIWQHVVRKQHTLAKVSKIGPDAQ 180 PVIMMS +G+ +VM+GI GACDYLLKPVRLEEL+NIWQHVVRK + VSK Sbjct: 89 PVIMMSRDGEIDSVMRGIKHGACDYLLKPVRLEELRNIWQHVVRKLVSPILVSKEESGEL 148
Query: 179 DREGERTNLEELDMT 135 D + + + D T Sbjct: 149 DEYPKHQDNADFDAT 163
>tr|A9RVL9|A9RVL9_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_23467 PE=4 SV=1 Length = 239
Score = 160 bits (405), Expect = 4e-38 Identities = 78/115 (67%), Positives = 93/115 (80%) Frame = -2
Query: 542 LIVERLLRSCLYQVTTCEQAVMALAMLRENKSRFDVVLSDVYMPHMDGFKLLELVRLEMD 363 +IVER+L+ C Y VTTC A ALAMLREN++ FD+V+SDVYMP MDGFKLLE + LE+D Sbjct: 17 MIVERMLQICQYTVTTCNSATKALAMLRENRNYFDLVISDVYMPDMDGFKLLEAIGLELD 76
Query: 362 VPVIMMSANGDTSNVMKGISEGACDYLLKPVRLEELQNIWQHVVRKQHTLAKVSK 198 +PVIMMS +G+T +VMKGI GACDYLLKPVRL+EL NIWQHVVRK T + K Sbjct: 77 LPVIMMSGDGETDSVMKGIRHGACDYLLKPVRLKELINIWQHVVRKLVTPRDIPK 131
>tr|A9RHS9|A9RHS9_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_114358 PE=4 SV=1 Length = 311
Score = 160 bits (405), Expect = 4e-38 Identities = 82/147 (55%), Positives = 110/147 (74%), Gaps = 5/147 (3%) Frame = -2
Query: 542 LIVERLLRSCLYQVTTCEQAVMALAMLRENKSRFDVVLSDVYMPHMDGFKLLELVRLEMD 363 +++E++L +C Y+VTTC +A AL +LRE+ +FD+V+SDV MP MDGFKLLELV LEMD Sbjct: 63 MVLEKMLTNCSYRVTTCGRATDALCLLREDIDKFDLVISDVNMPDMDGFKLLELVGLEMD 122
Query: 362 VPVIMMSANGDTSNVMKGISEGACDYLLKPVRLEELQNIWQHVVRKQHTLAKVSKIGPDA 183 +PVIMMS NG+TS VMKGI+ GACDYLLKPVR +EL+NIWQHVVRK+ K+++ Sbjct: 123 LPVIMMSGNGETSAVMKGITHGACDYLLKPVRQKELRNIWQHVVRKRRQDVKIARETKSV 182
Query: 182 QD-----REGERTNLEELDMTLDGTRD 117 ++ RE +RT +++D T T D Sbjct: 183 EEGGVCVRE-KRTGPDDVDYTSSATGD 208
>tr|Q9AV93|Q9AV93_MAIZE Two-component response regulator ARR1 OS=Zea mays GN=ZmRR8 PE=2 SV=1 Length = 684
Score = 160 bits (404), Expect = 5e-38 Identities = 85/155 (54%), Positives = 106/155 (68%), Gaps = 2/155 (1%) Frame = -2
Query: 542 LIVERLLRSCLYQVTTCEQAVMALAMLRENKSRFDVVLSDVYMPHMDGFKLLELVRLEMD 363 ++++R+L C Y VTTC QA AL MLREN+ FDV++SDV+MP MDGF+LLELV LEMD Sbjct: 28 VVLKRMLLECRYDVTTCPQATRALTMLRENRRGFDVIISDVHMPDMDGFRLLELVGLEMD 87
Query: 362 VPVIMMSANGDTSNVMKGISEGACDYLLKPVRLEELQNIWQHVVRKQHTLAKVSKIGP-- 189 +PVIMMSA+ T VMKGI GACDYL+KPVR+EEL+NIWQHVVRK+ K + Sbjct: 88 LPVIMMSADSRTDIVMKGIKHGACDYLIKPVRMEELKNIWQHVVRKKFNGNKDHEHSGSL 147
Query: 188 DAQDREGERTNLEELDMTLDGTRDGTHVAQPKGRE 84 D DR N E + + DG+ +Q K RE Sbjct: 148 DDTDRNRPTNNDNEYASSANDGGDGSWKSQKKKRE 182
>tr|A8I580|A8I580_CHLRE Predicted protein (Fragment) OS=Chlamydomonas reinhardtii GN=CHLREDRAFT_113139 PE=4 SV=1 Length = 235
Score = 159 bits (402), Expect = 9e-38 Identities = 71/106 (66%), Positives = 92/106 (86%) Frame = -2
Query: 539 IVERLLRSCLYQVTTCEQAVMALAMLRENKSRFDVVLSDVYMPHMDGFKLLELVRLEMDV 360 +VE++LR C Y+VT C A AL +LR+ + +D+VLSDVYMP MDGF+LLELV LEMD+ Sbjct: 19 VVEQMLRKCSYEVTVCSNATTALNILRDKNTEYDLVLSDVYMPDMDGFRLLELVGLEMDL 78
Query: 359 PVIMMSANGDTSNVMKGISEGACDYLLKPVRLEELQNIWQHVVRKQ 222 PVIMMS+NGDTSNV++G++ GACDYL+KPVRLEEL+N+WQHVVR++ Sbjct: 79 PVIMMSSNGDTSNVLRGVTHGACDYLIKPVRLEELRNLWQHVVRRR 124
>tr|Q948L2|Q948L2_MAIZE Response regulator 10 OS=Zea mays GN=ZmRR10 PE=2 SV=1 Length = 686
Score = 157 bits (397), Expect = 3e-37 Identities = 82/155 (52%), Positives = 105/155 (67%), Gaps = 2/155 (1%) Frame = -2
Query: 542 LIVERLLRSCLYQVTTCEQAVMALAMLRENKSRFDVVLSDVYMPHMDGFKLLELVRLEMD 363 ++++R+L C Y VTTC QA AL MLREN+ FDV++SDV+MP MDGF+LLELV LEMD Sbjct: 28 VVLKRMLLECRYDVTTCPQATRALTMLRENRRGFDVIISDVHMPDMDGFRLLELVGLEMD 87
Query: 362 VPVIMMSANGDTSNVMKGISEGACDYLLKPVRLEELQNIWQHVVRKQHTLAKVSKIGP-- 189 +PVIMMSA+ T VM G+ GACDYL+KPVR+EEL+NIWQHV+RK+ K + Sbjct: 88 LPVIMMSADSRTDIVMNGVKHGACDYLIKPVRMEELKNIWQHVIRKKFNENKDHEHSGSL 147
Query: 188 DAQDREGERTNLEELDMTLDGTRDGTHVAQPKGRE 84 D DR N E + + DG+ +Q K RE Sbjct: 148 DDTDRNRPTNNDNEYASSANDGGDGSWKSQRKKRE 182
>tr|Q6H805|Q6H805_ORYSJ Os02g0182100 protein OS=Oryza sativa subsp. japonica GN=OJ1297_C09.26 PE=2 SV=1 Length = 626
Score = 157 bits (396), Expect = 4e-37 Identities = 76/111 (68%), Positives = 92/111 (82%) Frame = -2
Query: 539 IVERLLRSCLYQVTTCEQAVMALAMLRENKSRFDVVLSDVYMPHMDGFKLLELVRLEMDV 360 I+E LL C Y VTT QA AL +LRENK +FD+V+SDV+MP MDGFKLLELV LEMD+ Sbjct: 43 ILENLLLRCQYHVTTTGQAATALKLLRENKDQFDLVISDVHMPDMDGFKLLELVGLEMDL 102
Query: 359 PVIMMSANGDTSNVMKGISEGACDYLLKPVRLEELQNIWQHVVRKQHTLAK 207 PVIM+SANG+T VMKGI+ GACDYLLKPVRLE+L+ IWQHV+R+++ AK Sbjct: 103 PVIMLSANGETQTVMKGITHGACDYLLKPVRLEQLRTIWQHVIRRKNCDAK 153
>tr|Q5SML5|Q5SML5_ORYSJ Os06g0183100 protein OS=Oryza sativa subsp. japonica GN=OSJNBb0036B04.15 PE=2 SV=1 Length = 696
Score = 157 bits (396), Expect = 4e-37 Identities = 73/106 (68%), Positives = 90/106 (84%) Frame = -2
Query: 539 IVERLLRSCLYQVTTCEQAVMALAMLRENKSRFDVVLSDVYMPHMDGFKLLELVRLEMDV 360 ++E LLR C Y VT+ QA+ AL +LREN+ FD+V+SDV+MP MDGFKLLELV LEMD+ Sbjct: 40 VLETLLRRCQYHVTSTNQAITALKLLRENRDMFDLVISDVHMPDMDGFKLLELVGLEMDL 99
Query: 359 PVIMMSANGDTSNVMKGISEGACDYLLKPVRLEELQNIWQHVVRKQ 222 PVIM+S NG+T VMKGI+ GACDYLLKPVR+EEL+NIWQHVVR++ Sbjct: 100 PVIMLSVNGETKTVMKGITHGACDYLLKPVRIEELRNIWQHVVRRK 145
>tr|B8B3I4|B8B3I4_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_21925 PE=4 SV=1 Length = 696
Score = 157 bits (396), Expect = 4e-37 Identities = 73/106 (68%), Positives = 90/106 (84%) Frame = -2
Query: 539 IVERLLRSCLYQVTTCEQAVMALAMLRENKSRFDVVLSDVYMPHMDGFKLLELVRLEMDV 360 ++E LLR C Y VT+ QA+ AL +LREN+ FD+V+SDV+MP MDGFKLLELV LEMD+ Sbjct: 40 VLETLLRRCQYHVTSTNQAITALKLLRENRDMFDLVISDVHMPDMDGFKLLELVGLEMDL 99
Query: 359 PVIMMSANGDTSNVMKGISEGACDYLLKPVRLEELQNIWQHVVRKQ 222 PVIM+S NG+T VMKGI+ GACDYLLKPVR+EEL+NIWQHVVR++ Sbjct: 100 PVIMLSVNGETKTVMKGITHGACDYLLKPVRIEELRNIWQHVVRRK 145
>tr|A7P3W0|A7P3W0_VITVI Chromosome chr1 scaffold_5, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00030597001 PE=4 SV=1 Length = 536
Score = 157 bits (396), Expect = 4e-37 Identities = 78/133 (58%), Positives = 99/133 (74%) Frame = -2
Query: 539 IVERLLRSCLYQVTTCEQAVMALAMLRENKSRFDVVLSDVYMPHMDGFKLLELVRLEMDV 360 I+E++LR CLY VTTC QA +AL +LRE K FD+VLSDV+MP MDG+KLLE V LEMD+ Sbjct: 47 ILEQMLRRCLYHVTTCSQATIALNILREKKGCFDIVLSDVHMPDMDGYKLLEHVGLEMDL 106
Query: 359 PVIMMSANGDTSNVMKGISEGACDYLLKPVRLEELQNIWQHVVRKQHTLAKVSKIGPDAQ 180 PVIMMSA+G TS VM+GI GACDYL+KP+R EEL+NIWQHVVRK+ K + + Sbjct: 107 PVIMMSADGRTSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRKKWNENKEHEHSGSLE 166
Query: 179 DREGERTNLEELD 141 D + + E+ + Sbjct: 167 DNDRHKRGGEDAE 179
|