BP916561
Clone id YMU001_000089_A09
Library
Length 488
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000089_A09.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
CCATGGAAATGAAGGATAGGGCCCAAAGGGCTGACGCTTCATGTAGTGTTATTCTGAATA
GTGCATGAGGCTAGGGGTTACGTGGTTTCATGGGAAGCAAGAGCCCAAATGCAACTGTAT
AAGACTACAAAATAGTGCAGGAAGACATAACCTCCGACTTGAAACTGCAAGCGGAGAATA
TTCAGGACCAAGGATAGAAATTGAGCAAATAGGGCATGGTTCATACTCAAGGAGGACAAG
CATTATGTCTAACAACATTAATATCCTGCACAAACAACACAGGCACAATAAGCAGGCCCC
ACATACAATATGCACGCGAATCGGCCCGAAGGCTACACACGTGGTGCAGGCCAGTCCTTC
AAAAATGCACCGTCAAGCATAGCATCATAGCATCCACTTCCAGGTGTGTACAAAGTTCAA
GGTCTGAGAACGAGCATGAAATAGATTGGCAGATAAAGATAAGCATCAGAGATGATAAAG
AGCATGCA
■■Homology search results ■■ -
sp_hit_id A6UPF4
Definition sp|A6UPF4|RL37_METVS 50S ribosomal protein L37e OS=Methanococcus vannielii (strain SB / ATCC 35089 / DSM 1224)
Align length 23
Score (bit) 30.0
E-value 5.8
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP916561|Adiantum capillus-veneris mRNA, clone:
YMU001_000089_A09.
(488 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|A6UPF4|RL37_METVS 50S ribosomal protein L37e OS=Methanococcus... 30 5.8
sp|Q6RSS2|L_PIRVV RNA-directed RNA polymerase OS=Pirital virus (... 30 7.6
sp|Q55FJ0|LVSG_DICDI Probable inactive serine/threonine-protein ... 30 7.6
sp|Q9JKD6|CLD5_RAT Claudin-5 OS=Rattus norvegicus GN=Cldn5 PE=1 ... 29 9.9
sp|O54942|CLD5_MOUSE Claudin-5 OS=Mus musculus GN=Cldn5 PE=1 SV=2 29 9.9

>sp|A6UPF4|RL37_METVS 50S ribosomal protein L37e OS=Methanococcus
vannielii (strain SB / ATCC 35089 / DSM 1224) GN=rpl37e
PE=3 SV=1
Length = 64

Score = 30.0 bits (66), Expect = 5.8
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = +2

Query: 275 QHRHNKQAPHTICTRIGPKATHV 343
Q RHNK + H +C R G +A HV
Sbjct: 8 QGRHNKGSNHIVCRRCGRRAYHV 30


>sp|Q6RSS2|L_PIRVV RNA-directed RNA polymerase OS=Pirital virus
(isolate Rat/Venezuela/VAV-488/1995) GN=L PE=3 SV=1
Length = 2210

Score = 29.6 bits (65), Expect = 7.6
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = +3

Query: 366 CTVKHSIIASTSRCVQSSRSENEHEIDWQIKISIRDD 476
CT+ + SRC + S+NE +ID+ KIS D
Sbjct: 530 CTLLYQKTGEKSRCYSVAFSDNEQQIDYGSKISFYAD 566


>sp|Q55FJ0|LVSG_DICDI Probable inactive serine/threonine-protein
kinase lvsG OS=Dictyostelium discoideum GN=lvsG PE=3
SV=1
Length = 2179

Score = 29.6 bits (65), Expect = 7.6
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 6/49 (12%)
Frame = +2

Query: 191 RIEIEQIGHGSY----SRRTSIMSN--NINILHKQHRHNKQAPHTICTR 319
R E + I H S + SI++N N+N H H HN P+T+ +R
Sbjct: 815 RYENQNINHNSTFLPNTTINSILNNLSNVNNHHHHHSHNSNIPNTVSSR 863


>sp|Q9JKD6|CLD5_RAT Claudin-5 OS=Rattus norvegicus GN=Cldn5 PE=1
SV=2
Length = 218

Score = 29.3 bits (64), Expect = 9.9
Identities = 19/52 (36%), Positives = 27/52 (51%)
Frame = -3

Query: 462 LSLSANLFHARSQTLNFVHTWKWML*CYA*RCIFEGLACTTCVAFGPIRVHI 307
L+LSA + AR+ T+ V +L A G CTTCVA GP++ +
Sbjct: 71 LALSAEVQAARALTVGAV-----LLALVALFVTLTGAQCTTCVAPGPVKARV 117


>sp|O54942|CLD5_MOUSE Claudin-5 OS=Mus musculus GN=Cldn5 PE=1 SV=2
Length = 218

Score = 29.3 bits (64), Expect = 9.9
Identities = 19/52 (36%), Positives = 27/52 (51%)
Frame = -3

Query: 462 LSLSANLFHARSQTLNFVHTWKWML*CYA*RCIFEGLACTTCVAFGPIRVHI 307
L+LSA + AR+ T+ V +L A G CTTCVA GP++ +
Sbjct: 71 LALSAEVQAARALTVGAV-----LLALVALFVTLTGAQCTTCVAPGPVKARV 117


tr_hit_id A8PSL6
Definition tr|A8PSL6|A8PSL6_MALGO Putative uncharacterized protein OS=Malassezia globosa (strain ATCC 96807 / CBS 7966)
Align length 45
Score (bit) 35.8
E-value 1.1
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP916561|Adiantum capillus-veneris mRNA, clone:
YMU001_000089_A09.
(488 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A8PSL6|A8PSL6_MALGO Putative uncharacterized protein OS=Malas... 36 1.1
tr|Q5QUV6|Q5QUV6_IDILO Uncharacterized conserved secreted protei... 33 9.3
tr|Q39UF5|Q39UF5_GEOMG FtsH peptidase. Metallo peptidase. MEROPS... 33 9.3

>tr|A8PSL6|A8PSL6_MALGO Putative uncharacterized protein
OS=Malassezia globosa (strain ATCC 96807 / CBS 7966)
GN=MGL_0279 PE=4 SV=1
Length = 1242

Score = 35.8 bits (81), Expect = 1.1
Identities = 18/45 (40%), Positives = 27/45 (60%)
Frame = +2

Query: 227 SRRTSIMSNNINILHKQHRHNKQAPHTICTRIGPKATHVVQASPS 361
SRR S+ S ++ + H+Q R N A H+ C RI PK+ + Q + S
Sbjct: 468 SRRMSLESLDLAMSHEQERENHLAGHSFCQRITPKSMLMQQDTAS 512


>tr|Q5QUV6|Q5QUV6_IDILO Uncharacterized conserved secreted protein
OS=Idiomarina loihiensis GN=IL1730 PE=4 SV=1
Length = 212

Score = 32.7 bits (73), Expect = 9.3
Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = -2

Query: 301 WGLLI-VPVLFVQDINVVRHNACPP*V*TMPYLLNFYPWS*IFSACSF 161
WG+ I VP+ + + +HNA PP YLL F PW + SA +
Sbjct: 58 WGVPIHVPMAMMYQESSFKHNALPP----RDYLLGFIPWGRVSSAYGY 101


>tr|Q39UF5|Q39UF5_GEOMG FtsH peptidase. Metallo peptidase. MEROPS
family M41 OS=Geobacter metallireducens (strain GS-15 /
ATCC 53774 / DSM 7210) GN=Gmet_1890 PE=4 SV=1
Length = 608

Score = 32.7 bits (73), Expect = 9.3
Identities = 24/69 (34%), Positives = 34/69 (49%)
Frame = +2

Query: 68 RLGVTWFHGKQEPKCNCIRLQNSAGRHNLRLETASGEYSGPRIEIEQIGHGSYSRRTSIM 247
++G F K+E I L H E + E G EI +I SYSR T+++
Sbjct: 511 KMGPVSFGKKEES----IFLGRDMSMHKNYSEATAVEIDG---EIRKIVEDSYSRVTTLL 563

Query: 248 SNNINILHK 274
+NI+ILHK
Sbjct: 564 RDNIDILHK 572