BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP916561|Adiantum capillus-veneris mRNA, clone:
YMU001_000089_A09.
         (488 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|A6UPF4|RL37_METVS 50S ribosomal protein L37e OS=Methanococcus...    30   5.8  
sp|Q6RSS2|L_PIRVV RNA-directed RNA polymerase OS=Pirital virus (...    30   7.6  
sp|Q55FJ0|LVSG_DICDI Probable inactive serine/threonine-protein ...    30   7.6  
sp|Q9JKD6|CLD5_RAT Claudin-5 OS=Rattus norvegicus GN=Cldn5 PE=1 ...    29   9.9  
sp|O54942|CLD5_MOUSE Claudin-5 OS=Mus musculus GN=Cldn5 PE=1 SV=2      29   9.9  

>sp|A6UPF4|RL37_METVS 50S ribosomal protein L37e OS=Methanococcus
           vannielii (strain SB / ATCC 35089 / DSM 1224) GN=rpl37e
           PE=3 SV=1
          Length = 64

 Score = 30.0 bits (66), Expect = 5.8
 Identities = 12/23 (52%), Positives = 15/23 (65%)
 Frame = +2

Query: 275 QHRHNKQAPHTICTRIGPKATHV 343
           Q RHNK + H +C R G +A HV
Sbjct: 8   QGRHNKGSNHIVCRRCGRRAYHV 30


>sp|Q6RSS2|L_PIRVV RNA-directed RNA polymerase OS=Pirital virus
           (isolate Rat/Venezuela/VAV-488/1995) GN=L PE=3 SV=1
          Length = 2210

 Score = 29.6 bits (65), Expect = 7.6
 Identities = 14/37 (37%), Positives = 20/37 (54%)
 Frame = +3

Query: 366 CTVKHSIIASTSRCVQSSRSENEHEIDWQIKISIRDD 476
           CT+ +      SRC   + S+NE +ID+  KIS   D
Sbjct: 530 CTLLYQKTGEKSRCYSVAFSDNEQQIDYGSKISFYAD 566


>sp|Q55FJ0|LVSG_DICDI Probable inactive serine/threonine-protein
           kinase lvsG OS=Dictyostelium discoideum GN=lvsG PE=3
           SV=1
          Length = 2179

 Score = 29.6 bits (65), Expect = 7.6
 Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 6/49 (12%)
 Frame = +2

Query: 191 RIEIEQIGHGSY----SRRTSIMSN--NINILHKQHRHNKQAPHTICTR 319
           R E + I H S     +   SI++N  N+N  H  H HN   P+T+ +R
Sbjct: 815 RYENQNINHNSTFLPNTTINSILNNLSNVNNHHHHHSHNSNIPNTVSSR 863


>sp|Q9JKD6|CLD5_RAT Claudin-5 OS=Rattus norvegicus GN=Cldn5 PE=1
           SV=2
          Length = 218

 Score = 29.3 bits (64), Expect = 9.9
 Identities = 19/52 (36%), Positives = 27/52 (51%)
 Frame = -3

Query: 462 LSLSANLFHARSQTLNFVHTWKWML*CYA*RCIFEGLACTTCVAFGPIRVHI 307
           L+LSA +  AR+ T+  V     +L   A      G  CTTCVA GP++  +
Sbjct: 71  LALSAEVQAARALTVGAV-----LLALVALFVTLTGAQCTTCVAPGPVKARV 117


>sp|O54942|CLD5_MOUSE Claudin-5 OS=Mus musculus GN=Cldn5 PE=1 SV=2
          Length = 218

 Score = 29.3 bits (64), Expect = 9.9
 Identities = 19/52 (36%), Positives = 27/52 (51%)
 Frame = -3

Query: 462 LSLSANLFHARSQTLNFVHTWKWML*CYA*RCIFEGLACTTCVAFGPIRVHI 307
           L+LSA +  AR+ T+  V     +L   A      G  CTTCVA GP++  +
Sbjct: 71  LALSAEVQAARALTVGAV-----LLALVALFVTLTGAQCTTCVAPGPVKARV 117

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP916561|Adiantum capillus-veneris mRNA, clone:
YMU001_000089_A09.
         (488 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A8PSL6|A8PSL6_MALGO Putative uncharacterized protein OS=Malas...    36   1.1  
tr|Q5QUV6|Q5QUV6_IDILO Uncharacterized conserved secreted protei...    33   9.3  
tr|Q39UF5|Q39UF5_GEOMG FtsH peptidase. Metallo peptidase. MEROPS...    33   9.3  

>tr|A8PSL6|A8PSL6_MALGO Putative uncharacterized protein
           OS=Malassezia globosa (strain ATCC 96807 / CBS 7966)
           GN=MGL_0279 PE=4 SV=1
          Length = 1242

 Score = 35.8 bits (81), Expect = 1.1
 Identities = 18/45 (40%), Positives = 27/45 (60%)
 Frame = +2

Query: 227 SRRTSIMSNNINILHKQHRHNKQAPHTICTRIGPKATHVVQASPS 361
           SRR S+ S ++ + H+Q R N  A H+ C RI PK+  + Q + S
Sbjct: 468 SRRMSLESLDLAMSHEQERENHLAGHSFCQRITPKSMLMQQDTAS 512


>tr|Q5QUV6|Q5QUV6_IDILO Uncharacterized conserved secreted protein
           OS=Idiomarina loihiensis GN=IL1730 PE=4 SV=1
          Length = 212

 Score = 32.7 bits (73), Expect = 9.3
 Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
 Frame = -2

Query: 301 WGLLI-VPVLFVQDINVVRHNACPP*V*TMPYLLNFYPWS*IFSACSF 161
           WG+ I VP+  +   +  +HNA PP      YLL F PW  + SA  +
Sbjct: 58  WGVPIHVPMAMMYQESSFKHNALPP----RDYLLGFIPWGRVSSAYGY 101


>tr|Q39UF5|Q39UF5_GEOMG FtsH peptidase. Metallo peptidase. MEROPS
           family M41 OS=Geobacter metallireducens (strain GS-15 /
           ATCC 53774 / DSM 7210) GN=Gmet_1890 PE=4 SV=1
          Length = 608

 Score = 32.7 bits (73), Expect = 9.3
 Identities = 24/69 (34%), Positives = 34/69 (49%)
 Frame = +2

Query: 68  RLGVTWFHGKQEPKCNCIRLQNSAGRHNLRLETASGEYSGPRIEIEQIGHGSYSRRTSIM 247
           ++G   F  K+E     I L      H    E  + E  G   EI +I   SYSR T+++
Sbjct: 511 KMGPVSFGKKEES----IFLGRDMSMHKNYSEATAVEIDG---EIRKIVEDSYSRVTTLL 563

Query: 248 SNNINILHK 274
            +NI+ILHK
Sbjct: 564 RDNIDILHK 572