BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP916564|Adiantum capillus-veneris mRNA, clone:
YMU001_000089_A12.
         (509 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P70289|PTPRV_MOUSE Receptor-type tyrosine-protein phosphatase...    32   2.3  
sp|Q67344|NRAM_I82A7 Neuraminidase (Fragment) OS=Influenza A vir...    30   5.0  
sp|Q55GD6|SF3B4_DICDI Splicing factor 3B subunit 4 OS=Dictyostel...    30   6.6  
sp|P79010|COX4_SCHPO Cytochrome c oxidase polypeptide 4, mitocho...    30   8.6  

>sp|P70289|PTPRV_MOUSE Receptor-type tyrosine-protein phosphatase V
            OS=Mus musculus GN=Ptprv PE=2 SV=1
          Length = 1705

 Score = 31.6 bits (70), Expect = 2.3
 Identities = 21/50 (42%), Positives = 26/50 (52%), Gaps = 5/50 (10%)
 Frame = +1

Query: 10   ARQHHTYNRETH-----GKIKPVRHAYPFPAQITKNIFPHHYPEDLTRVR 144
            AR H  + +E       GK +P   A   PA ITKN +PH  P D +RVR
Sbjct: 1144 ARAHQAFFQEFEELKEVGKDQPRLEA-EHPANITKNRYPHVLPYDHSRVR 1192


>sp|Q67344|NRAM_I82A7 Neuraminidase (Fragment) OS=Influenza A virus
           (strain A/Swine/Hong Kong/127/1982 H3N2) GN=NA PE=3 SV=1
          Length = 446

 Score = 30.4 bits (67), Expect = 5.0
 Identities = 19/63 (30%), Positives = 34/63 (53%)
 Frame = -2

Query: 337 IKENSVFHFDTNREIGSVGSPCSAGLLMWAVLIERELKRCRTEIISYVSSRGCINYCFVP 158
           I ++S   ++T + I    +P S   +   V+++R+ +   + I S V S+GCIN CF  
Sbjct: 343 ISKDSRSGYETFKVIDGWSTPNSKSQINRQVIVDRDNRSGYSGIFS-VESKGCINRCFYV 401

Query: 157 FLV 149
            L+
Sbjct: 402 ELI 404


>sp|Q55GD6|SF3B4_DICDI Splicing factor 3B subunit 4 OS=Dictyostelium
           discoideum GN=sf3b4 PE=3 SV=1
          Length = 359

 Score = 30.0 bits (66), Expect = 6.6
 Identities = 12/37 (32%), Positives = 20/37 (54%)
 Frame = +1

Query: 13  RQHHTYNRETHGKIKPVRHAYPFPAQITKNIFPHHYP 123
           +QHH +++       P+ H +P P Q+  +  PHH P
Sbjct: 301 QQHHPHHQH------PIPHPHPLPHQLRPHPHPHHPP 331


>sp|P79010|COX4_SCHPO Cytochrome c oxidase polypeptide 4,
           mitochondrial OS=Schizosaccharomyces pombe GN=cox4 PE=2
           SV=1
          Length = 164

 Score = 29.6 bits (65), Expect = 8.6
 Identities = 13/35 (37%), Positives = 19/35 (54%)
 Frame = -2

Query: 322 VFHFDTNREIGSVGSPCSAGLLMWAVLIERELKRC 218
           V   D  R IG  GSP  +  L+W  + + +L+RC
Sbjct: 109 VTSLDPYRHIGCTGSPSGSHNLIWMTVYKDKLRRC 143

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP916564|Adiantum capillus-veneris mRNA, clone:
YMU001_000089_A12.
         (509 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done

 ***** No hits found ******