BP916567
Clone id YMU001_000089_B03
Library
Length 481
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000089_B03.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
GTTGGGGCTTGGCTGGAATACTGTTACCAAATTAATGCTGGATTTCCTAGTCCAGGAGCG
TCCTTACATGCGCCTACTTGACCATGGCCTTGAGCTGGATGGTGGTGATGCAGAGGAAAC
CCATCGATCTAGTGATATAGTGGATGAGCTTGAAAGGTGGTTGGGAGCTGATTGAGTCTT
GGGAAGCCAGAATGGAGCTGTTTGGCCTCTCTTTGGCCCTTGATCAAAGTGGTCAAAGCT
TTGCCTGTCATGGTAAACAGAGATAAGGATGATCAAAAGTGGAGTATTATGGCCTAATAT
AGCTATTTGAAGTCTAAATGCATTACTCGGAGCCTTTTTGGACTGCCATGAAATTATCAA
GGCATTCTATGTTCATGATCATCTCTTGAATAATTGCTGCTTAAATTGTTCTTGGCAACT
CAATTAACTGAAATAATTTTTACTGAATTAAGCATATCTAACAGATAATGCTTTACTTTT
C
■■Homology search results ■■ -
sp_hit_id Q9Y2L9
Definition sp|Q9Y2L9|LRCH1_HUMAN Leucine-rich repeat and calponin homology domain-containing protein 1 OS=Homo sapiens
Align length 34
Score (bit) 33.1
E-value 0.67
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP916567|Adiantum capillus-veneris mRNA, clone:
YMU001_000089_B03.
(481 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q9Y2L9|LRCH1_HUMAN Leucine-rich repeat and calponin homology ... 33 0.67
sp|P49263|PXN1_XENLA Pentraxin fusion protein OS=Xenopus laevis ... 31 3.4
sp|Q6FLC5|SEY1_CANGA Protein SEY1 OS=Candida glabrata GN=SEY1 PE... 30 4.4

>sp|Q9Y2L9|LRCH1_HUMAN Leucine-rich repeat and calponin homology
domain-containing protein 1 OS=Homo sapiens GN=LRCH1
PE=1 SV=2
Length = 728

Score = 33.1 bits (74), Expect = 0.67
Identities = 17/34 (50%), Positives = 18/34 (52%)
Frame = -3

Query: 146 HPLYH*IDGFPLHHHHPAQGHGQVGACKDAPGLG 45
HPL+H P HHHH Q HG GA A G G
Sbjct: 21 HPLHH-----PHHHHHHHQHHGGTGAPGGAGGGG 49


>sp|P49263|PXN1_XENLA Pentraxin fusion protein OS=Xenopus laevis
GN=pxn1 PE=2 SV=1
Length = 416

Score = 30.8 bits (68), Expect = 3.4
Identities = 15/40 (37%), Positives = 23/40 (57%), Gaps = 3/40 (7%)
Frame = +2

Query: 143 DELERWLGAD*VLG---SQNGAVWPLFGP*SKWSKLCLSW 253
DEL W+ D +G S +G ++P S+W+ LCL+W
Sbjct: 275 DELNLWIERDGRIGLYMSGDGIIFPRMKFKSEWNHLCLTW 314


>sp|Q6FLC5|SEY1_CANGA Protein SEY1 OS=Candida glabrata GN=SEY1 PE=3
SV=1
Length = 783

Score = 30.4 bits (67), Expect = 4.4
Identities = 20/59 (33%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Frame = -2

Query: 306 IAILGHNTPLLIILISVYHDRQSFDHFDQGPKRGQTAP-FWLPKTQSAPNHLSSSSTIS 133
I++ G + L+++ + Q FD D KR QT WL TQ+ NH S++ T S
Sbjct: 39 ISVFGSQSSGKSTLLNILFNTQ-FDTMDAQVKRQQTTKGIWLAHTQNVNNHKSTTDTDS 96


tr_hit_id A5FL36
Definition tr|A5FL36|A5FL36_FLAJ1 Glycosyl transferase, family 9 OS=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101)
Align length 56
Score (bit) 33.5
E-value 5.4
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP916567|Adiantum capillus-veneris mRNA, clone:
YMU001_000089_B03.
(481 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A5FL36|A5FL36_FLAJ1 Glycosyl transferase, family 9 OS=Flavoba... 33 5.4
tr|Q17R43|Q17R43_HUMAN LRCH1 protein OS=Homo sapiens GN=LRCH1 PE... 33 7.0
tr|B7ZLL5|B7ZLL5_HUMAN Putative uncharacterized protein OS=Homo ... 33 7.0
tr|B1ALE7|B1ALE7_HUMAN Leucine-rich repeats and calponin homolog... 33 7.0
tr|A8KA33|A8KA33_HUMAN cDNA FLJ76690, highly similar to Homo sap... 33 7.0

>tr|A5FL36|A5FL36_FLAJ1 Glycosyl transferase, family 9
OS=Flavobacterium johnsoniae (strain ATCC 17061 / DSM
2064 / UW101) GN=Fjoh_1046 PE=4 SV=1
Length = 335

Score = 33.5 bits (75), Expect = 5.4
Identities = 21/56 (37%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Frame = -3

Query: 260 LFTMTGKALTTLIKGQREAKQLHSGFPRL-NQLPTTFQAHPLYH*IDGFPLHHHHP 96
LF ++GK T+ KG+ K+L ++ QLPT FQ H GFPL+ +P
Sbjct: 93 LFALSGKKRATVDKGREGKKELTRVENKIFKQLPTMFQRHAKVFEELGFPLNLSNP 148


>tr|Q17R43|Q17R43_HUMAN LRCH1 protein OS=Homo sapiens GN=LRCH1 PE=2
SV=1
Length = 763

Score = 33.1 bits (74), Expect = 7.0
Identities = 17/34 (50%), Positives = 18/34 (52%)
Frame = -3

Query: 146 HPLYH*IDGFPLHHHHPAQGHGQVGACKDAPGLG 45
HPL+H P HHHH Q HG GA A G G
Sbjct: 21 HPLHH-----PHHHHHHHQHHGGTGAPGGAGGGG 49


>tr|B7ZLL5|B7ZLL5_HUMAN Putative uncharacterized protein OS=Homo
sapiens PE=2 SV=1
Length = 763

Score = 33.1 bits (74), Expect = 7.0
Identities = 17/34 (50%), Positives = 18/34 (52%)
Frame = -3

Query: 146 HPLYH*IDGFPLHHHHPAQGHGQVGACKDAPGLG 45
HPL+H P HHHH Q HG GA A G G
Sbjct: 21 HPLHH-----PHHHHHHHQHHGGTGAPGGAGGGG 49


>tr|B1ALE7|B1ALE7_HUMAN Leucine-rich repeats and calponin homology
(CH) domain containing 1 OS=Homo sapiens GN=LRCH1 PE=4
SV=1
Length = 734

Score = 33.1 bits (74), Expect = 7.0
Identities = 17/34 (50%), Positives = 18/34 (52%)
Frame = -3

Query: 146 HPLYH*IDGFPLHHHHPAQGHGQVGACKDAPGLG 45
HPL+H P HHHH Q HG GA A G G
Sbjct: 21 HPLHH-----PHHHHHHHQHHGGTGAPGGAGGGG 49


>tr|A8KA33|A8KA33_HUMAN cDNA FLJ76690, highly similar to Homo
sapiens neuronal protein isoform a mRNA OS=Homo sapiens
PE=2 SV=1
Length = 696

Score = 33.1 bits (74), Expect = 7.0
Identities = 17/34 (50%), Positives = 18/34 (52%)
Frame = -3

Query: 146 HPLYH*IDGFPLHHHHPAQGHGQVGACKDAPGLG 45
HPL+H P HHHH Q HG GA A G G
Sbjct: 21 HPLHH-----PHHHHHHHQHHGGTGAPGGAGGGG 49