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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP916569
Clone id YMU001_000089_B05
Library
Length 546
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000089_B05.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
CGCAGGAATTATTTATAAATAGACAAAAACATTGAAAGAAGCATTCAAAAAGGTCAATCC
AAAAAGATGTACAATAGTCTAATCACTTCTTCAAAGCTCCCACAAGCAAACTCCCATGAA
ATTAGCCACATCGGCTATCCTCCCATAGTTGTCTTTACCTTCCGTGGTTGACCCAGAACA
AAGGCTAAATCTATGACTGTGAATGTTGGCTGGTGAATGACCATGTGCTCCTTTGGCTGA
AGACCAAGAACATGTGCATACACATAGTACATGTGCTTGCATGCAACGAAAGTCTTTTTT
GCACACTCTCTTTTCTGAAAATCTGGGCACGTGCATCTAGGCTCCTCTTTGATTTGAACA
TCATAAACATTTTCTGTCATTACTCTAAATATTACATGCTGCTTTTGTATCATAACGATC
TCCTCCAAAAGTGTCATATCCAATCTGTTAGCTGCGTCAATTCTTTTTTGAGCTTCTTTG
GAAATGCCATGTCTCCACTTTCGCTTCCTGCTACCATTGCCCAACTCTGAGGTACTTCTA
CATATG
■■Homology search results ■■ -
sp_hit_id Q55DJ8
Definition sp|Q55DJ8|IRLC_DICDI Probable serine/threonine-protein kinase irlC OS=Dictyostelium discoideum
Align length 121
Score (bit) 33.1
E-value 0.89
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP916569|Adiantum capillus-veneris mRNA, clone:
YMU001_000089_B05.
         (546 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q55DJ8|IRLC_DICDI Probable serine/threonine-protein kinase ir...    33   0.89 
sp|Q5UP35|YL165_MIMIV Putative F-box protein L165 OS=Acanthamoeb...    32   1.5  
sp|Q3ECY6|SDG41_ARATH Protein SET DOMAIN GROUP 41 OS=Arabidopsis...    30   7.6  
sp|O14050|YEYH_SCHPO Uncharacterized mscS family protein C2C4.17...    30   9.9  
sp|Q8K912|MTLD_BUCAP Mannitol-1-phosphate 5-dehydrogenase OS=Buc...    30   9.9  

>sp|Q55DJ8|IRLC_DICDI Probable serine/threonine-protein kinase irlC
           OS=Dictyostelium discoideum GN=irlC PE=3 SV=1
          Length = 1444

 Score = 33.1 bits (74), Expect = 0.89
 Identities = 30/121 (24%), Positives = 57/121 (47%), Gaps = 9/121 (7%)
 Frame = -2

Query: 524 LGNGSRKRKWRHGISKEAQKRID-AANRLDMTLLEE-----IVMIQKQHVIFRVMTENVY 363
           L N  ++ ++    +++ +   D   N +D  +L++     I + Q+  +  R  T   +
Sbjct: 441 LNNNQKQIQFNENFTRQQKIDFDNCPNEIDTFILDKTQCNLITLSQEFSIKVRAFT---F 497

Query: 362 DVQIKEEPRCTCPDFQKRECAKKTFVACKHMYYV---YAHVLGLQPKEHMVIHQPTFTVI 192
            +   E   C+C D+ KRE       +CKHM+++   Y HV    P+   +I+Q  FT I
Sbjct: 498 YLSFGEIFTCSCEDY-KRE------FSCKHMFFILLNYYHV----PRNSYLIYQRQFTEI 546

Query: 191 D 189
           +
Sbjct: 547 E 547


>sp|Q5UP35|YL165_MIMIV Putative F-box protein L165 OS=Acanthamoeba
           polyphaga mimivirus GN=MIMI_L165 PE=4 SV=1
          Length = 271

 Score = 32.3 bits (72), Expect = 1.5
 Identities = 23/64 (35%), Positives = 36/64 (56%), Gaps = 2/64 (3%)
 Frame = +3

Query: 342 LLFDLNIIN-IFCHYSKYYML-LLYHNDLLQKCHIQSVSCVNSFLSFFGNAMSPLSLPAT 515
           LL D + IN +FC    YY + L+Y+ND+     IQ+VS +N F      A++  ++P+ 
Sbjct: 18  LLSDTDKINFMFCCSRFYYFIDLVYYNDIYDYYKIQNVSFINKFKKIRYLAVTD-TIPSV 76

Query: 516 IAQL 527
           I  L
Sbjct: 77  ITHL 80


>sp|Q3ECY6|SDG41_ARATH Protein SET DOMAIN GROUP 41 OS=Arabidopsis
           thaliana GN=SDG41 PE=2 SV=1
          Length = 558

 Score = 30.0 bits (66), Expect = 7.6
 Identities = 25/83 (30%), Positives = 32/83 (38%), Gaps = 6/83 (7%)
 Frame = +3

Query: 126 PHRLSSHSC------LYLPWLTQNKG*IYDCECWLVNDHVLLWLKTKNMCIHIVHVLACN 287
           PH L  H+C       Y+   T  +    D E  +V D   +          + H L C 
Sbjct: 357 PHCLRLHACHYVALNAYITLATAYRIRSIDSETGIVCDMSRISAAYSLFLAGVSHHLFCA 416

Query: 288 ESLFCTLSFLKIWARASRLLFDL 356
           E  F  +S  K W  A  LLFDL
Sbjct: 417 ERSFA-ISAAKFWKNAGELLFDL 438


>sp|O14050|YEYH_SCHPO Uncharacterized mscS family protein C2C4.17c
           OS=Schizosaccharomyces pombe GN=SPAC2C4.17c PE=2 SV=1
          Length = 840

 Score = 29.6 bits (65), Expect = 9.9
 Identities = 22/80 (27%), Positives = 37/80 (46%)
 Frame = +3

Query: 306 LSFLKIWARASRLLFDLNIINIFCHYSKYYMLLLYHNDLLQKCHIQSVSCVNSFLSFFGN 485
           L+F+K   R  R + DLN+ +     S  + +  Y+    Q   +Q V   N F+    N
Sbjct: 586 LTFVKENERDFRPIIDLNVSDFSTLDSLKFTVTYYYKSNWQNVSLQCVR-RNKFMCALKN 644

Query: 486 AMSPLSLPATIAQL*GTSTY 545
           A++  +LPA    + G+  Y
Sbjct: 645 AIATTNLPAVADPVRGSPDY 664


>sp|Q8K912|MTLD_BUCAP Mannitol-1-phosphate 5-dehydrogenase
           OS=Buchnera aphidicola subsp. Schizaphis graminum
           GN=mtlD PE=3 SV=1
          Length = 388

 Score = 29.6 bits (65), Expect = 9.9
 Identities = 19/57 (33%), Positives = 30/57 (52%)
 Frame = +3

Query: 351 DLNIINIFCHYSKYYMLLLYHNDLLQKCHIQSVSCVNSFLSFFGNAMSPLSLPATIA 521
           D NIIN   +Y KY + L+  N   +  +I ++S +NS+     N +S + L  T A
Sbjct: 33  DQNIINAINNYKKYKIKLI-DNSFEKIININNISAINSYDPNVLNVISHVDLITTAA 88
tr_hit_id B6Q255
Definition tr|B6Q255|B6Q255_PENMA RING finger domain protein (Znf1), putative OS=Penicillium marneffei ATCC 18224
Align length 101
Score (bit) 44.3
E-value 0.004
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP916569|Adiantum capillus-veneris mRNA, clone:
YMU001_000089_B05.
         (546 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B6Q255|B6Q255_PENMA RING finger domain protein (Znf1), putati...    44   0.004
tr|B8LUC5|B8LUC5_9EURO RING finger domain protein (Znf1), putati...    43   0.010
tr|Q5Z9C5|Q5Z9C5_ORYSJ Putative uncharacterized protein P0427B07...    43   0.012
tr|A8IZU8|A8IZU8_CHLRE Predicted protein (Fragment) OS=Chlamydom...    43   0.012
tr|A3BCP0|A3BCP0_ORYSJ Putative uncharacterized protein OS=Oryza...    42   0.028
tr|Q5KM71|Q5KM71_CRYNE Expressed protein OS=Cryptococcus neoform...    42   0.028
tr|A2YE05|A2YE05_ORYSI Putative uncharacterized protein OS=Oryza...    41   0.036
tr|A6RH51|A6RH51_AJECN Predicted protein OS=Ajellomyces capsulat...    41   0.036
tr|Q55XR8|Q55XR8_CRYNE Putative uncharacterized protein OS=Crypt...    41   0.047
tr|A7P566|A7P566_VITVI Chromosome chr4 scaffold_6, whole genome ...    40   0.062
tr|Q7SES3|Q7SES3_NEUCR Putative uncharacterized protein OS=Neuro...    40   0.062
tr|B8NA51|B8NA51_ASPFL RING finger domain protein (Znf1), putati...    40   0.081
tr|B1PM78|B1PM78_FUSOX Znf1 (Fragment) OS=Fusarium oxysporum GN=...    40   0.11 
tr|Q54CJ0|Q54CJ0_DICDI Putative uncharacterized protein OS=Dicty...    39   0.14 
tr|A6RTR4|A6RTR4_BOTFB Putative uncharacterized protein OS=Botry...    39   0.14 
tr|Q9LYG8|Q9LYG8_ARATH PHD family protein OS=Arabidopsis thalian...    39   0.18 
tr|A9S0M4|A9S0M4_PHYPA Predicted protein OS=Physcomitrella paten...    39   0.18 
tr|Q5B521|Q5B521_EMENI Putative uncharacterized protein OS=Emeri...    38   0.31 
tr|Q4PEF4|Q4PEF4_USTMA Putative uncharacterized protein OS=Ustil...    38   0.40 
tr|Q8J2R2|Q8J2R2_GIBMO Znf1p OS=Gibberella moniliformis GN=ZNF1 ...    37   0.52 
tr|A8PG28|A8PG28_COPC7 Predicted protein OS=Coprinopsis cinerea ...    37   0.89 
tr|A1CXW7|A1CXW7_NEOFI RING finger domain protein (Znf1), putati...    37   0.89 
tr|Q1DZU3|Q1DZU3_COCIM Putative uncharacterized protein OS=Cocci...    36   1.2  
tr|B2ATJ0|B2ATJ0_PODAN Predicted CDS Pa_1_16030 OS=Podospora ans...    36   1.2  
tr|Q0SSJ4|Q0SSJ4_CLOPS Helicase, SNF2/RAD54 family OS=Clostridiu...    35   2.0  
tr|Q2UG86|Q2UG86_ASPOR Predicted protein OS=Aspergillus oryzae G...    35   2.0  
tr|B0DFU5|B0DFU5_LACBS Predicted protein OS=Laccaria bicolor (st...    35   2.0  
tr|B2W107|B2W107_PYRTR RING finger domain containing protein (Zn...    35   3.4  
tr|B0D4E5|B0D4E5_LACBS Predicted protein OS=Laccaria bicolor (st...    35   3.4  
tr|Q23FC1|Q23FC1_TETTH Putative uncharacterized protein OS=Tetra...    34   4.4  

>tr|B6Q255|B6Q255_PENMA RING finger domain protein (Znf1), putative
           OS=Penicillium marneffei ATCC 18224 GN=PMAA_027740 PE=4
           SV=1
          Length = 333

 Score = 44.3 bits (103), Expect = 0.004
 Identities = 32/101 (31%), Positives = 47/101 (46%), Gaps = 4/101 (3%)
 Frame = -2

Query: 536 STSELGNGSRKRKWRHGISKEAQKRIDAANRLDMTLLE----EIVMIQKQHVIFRVMTEN 369
           S S+     R+RK+R    +   +++  A    M ++     E   I +++V     T N
Sbjct: 75  SQSQYPFEKRRRKFRSNPPRTYLEKMHRATTQRMFVISRRRSENGGITEENVDIVGTTGN 134

Query: 368 VYDVQIKEEPRCTCPDFQKRECAKKTFVACKHMYYVYAHVL 246
           +Y V I  EPRCTCPD  K          CKH+ YV  +VL
Sbjct: 135 IYTVTITYEPRCTCPDAMKGN-------QCKHIIYVLVNVL 168


>tr|B8LUC5|B8LUC5_9EURO RING finger domain protein (Znf1), putative
           OS=Talaromyces stipitatus ATCC 10500 GN=TSTA_071010 PE=4
           SV=1
          Length = 314

 Score = 43.1 bits (100), Expect = 0.010
 Identities = 24/59 (40%), Positives = 30/59 (50%)
 Frame = -2

Query: 422 EIVMIQKQHVIFRVMTENVYDVQIKEEPRCTCPDFQKRECAKKTFVACKHMYYVYAHVL 246
           E   I +++V     T N+Y V I  EPRCTCPD  K          CKH+ YV  +VL
Sbjct: 99  ETADITEENVDIVGTTGNIYTVTITHEPRCTCPDALKGN-------QCKHIIYVLVNVL 150


>tr|Q5Z9C5|Q5Z9C5_ORYSJ Putative uncharacterized protein P0427B07.42
           OS=Oryza sativa subsp. japonica GN=P0427B07.42 PE=4 SV=1
          Length = 263

 Score = 42.7 bits (99), Expect = 0.012
 Identities = 30/93 (32%), Positives = 42/93 (45%), Gaps = 2/93 (2%)
 Frame = -2

Query: 482 SKEAQKRIDAANRLDMTLLEEIVMIQKQHVIFRVM--TENVYDVQIKEEPRCTCPDFQKR 309
           + E Q     A+R+   L  ++ ++ +    F V+  T NVY V +   P CTCPD    
Sbjct: 13  ASEEQVTRRVASRIIRALQHQLRLLHRAGPEFFVLGATGNVYTVTLAAAPACTCPD---- 68

Query: 308 ECAKKTFVACKHMYYVYAHVLGLQPKEHMVIHQ 210
                  V CKH+ +V   VLGL   E  V  Q
Sbjct: 69  -----PSVPCKHILFVLLRVLGLSLDEACVWRQ 96


>tr|A8IZU8|A8IZU8_CHLRE Predicted protein (Fragment)
           OS=Chlamydomonas reinhardtii GN=CHLREDRAFT_148287 PE=4
           SV=1
          Length = 434

 Score = 42.7 bits (99), Expect = 0.012
 Identities = 28/68 (41%), Positives = 34/68 (50%)
 Frame = -2

Query: 377 TENVYDVQIKEEPRCTCPDFQKRECAKKTFVACKHMYYVYAHVLGLQPKEHMVIHQPTFT 198
           T NVY V I  +P CTCPDF KR         CKH+ +V   VL  Q +   VI Q   T
Sbjct: 180 TGNVYVVHIGTQPACTCPDFAKRA------GLCKHILFVMLRVL-RQDRLDPVIWQRALT 232

Query: 197 VIDLAFVL 174
           + +   VL
Sbjct: 233 IREAQRVL 240


>tr|A3BCP0|A3BCP0_ORYSJ Putative uncharacterized protein OS=Oryza
           sativa subsp. japonica GN=OsJ_020812 PE=4 SV=1
          Length = 266

 Score = 41.6 bits (96), Expect = 0.028
 Identities = 28/87 (32%), Positives = 40/87 (45%), Gaps = 2/87 (2%)
 Frame = -2

Query: 482 SKEAQKRIDAANRLDMTLLEEIVMIQKQHVIFRVM--TENVYDVQIKEEPRCTCPDFQKR 309
           + E Q     A+R+   L  ++ ++ +    F V+  T NVY V +   P CTCPD    
Sbjct: 13  ASEEQVTRRVASRIIRALQHQLRLLHRAGPEFFVLGATGNVYTVTLAAAPACTCPD---- 68

Query: 308 ECAKKTFVACKHMYYVYAHVLGLQPKE 228
                  V CKH+ +V   VLGL   E
Sbjct: 69  -----PSVPCKHILFVLLRVLGLSLDE 90


>tr|Q5KM71|Q5KM71_CRYNE Expressed protein OS=Cryptococcus neoformans
           GN=CNB02720 PE=4 SV=1
          Length = 548

 Score = 41.6 bits (96), Expect = 0.028
 Identities = 33/115 (28%), Positives = 52/115 (45%), Gaps = 4/115 (3%)
 Frame = -2

Query: 509 RKRKWRHGISKEAQKRIDAANRLDMTLLEEIVMIQKQHVI--FRVM--TENVYDVQIKEE 342
           R  + R    K    R D A    M ++E +      + +  F+V+  T NVY V I   
Sbjct: 271 RPARGRSHCPKTIMDRCDRAMSQRMFMIERVPYANAPNQVDFFKVLGSTGNVYTVTIGNF 330

Query: 341 PRCTCPDFQKRECAKKTFVACKHMYYVYAHVLGLQPKEHMVIHQPTFTVIDLAFV 177
           P C CPD     C K     CKH+ +V+  VL + P++  + +Q   T  ++ +V
Sbjct: 331 PNCDCPD-----CIKGN-SPCKHIIFVFLKVLKV-PEDSSIWYQKGLTAAEVQWV 378


>tr|A2YE05|A2YE05_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_23347 PE=4 SV=1
          Length = 263

 Score = 41.2 bits (95), Expect = 0.036
 Identities = 30/93 (32%), Positives = 41/93 (44%), Gaps = 2/93 (2%)
 Frame = -2

Query: 482 SKEAQKRIDAANRLDMTLLEEIVMIQKQHVIFRVM--TENVYDVQIKEEPRCTCPDFQKR 309
           + E Q     A+R+   L   + ++ +    F V+  T NVY V +   P CTCPD    
Sbjct: 13  ASEEQVTRRVASRIIRALQHHLRLLHRAGPEFFVLGATGNVYMVTLAAAPACTCPD---- 68

Query: 308 ECAKKTFVACKHMYYVYAHVLGLQPKEHMVIHQ 210
                  V CKH+ +V   VLGL   E  V  Q
Sbjct: 69  -----PSVPCKHILFVLLRVLGLSLDEACVWRQ 96


>tr|A6RH51|A6RH51_AJECN Predicted protein OS=Ajellomyces capsulata
           (strain NAm1 / WU24) GN=HCAG_08968 PE=4 SV=1
          Length = 322

 Score = 41.2 bits (95), Expect = 0.036
 Identities = 29/98 (29%), Positives = 44/98 (44%), Gaps = 10/98 (10%)
 Frame = -2

Query: 509 RKRKWRHGISKEAQKRIDAANRLDMTLLEEIVMIQKQH----------VIFRVMTENVYD 360
           RKR     + KE ++R         + L+++ ++ ++           V     T N+Y+
Sbjct: 81  RKRAASPSVEKEERRRRVFRKHPPQSYLQKLFVVDRKRDGTEDVPMEKVQIVGTTGNLYE 140

Query: 359 VQIKEEPRCTCPDFQKRECAKKTFVACKHMYYVYAHVL 246
           V I   PRCTCPD QK          CKH+ YV  +VL
Sbjct: 141 VVIGLVPRCTCPDSQKGN-------QCKHIIYVLHNVL 171


>tr|Q55XR8|Q55XR8_CRYNE Putative uncharacterized protein
           OS=Cryptococcus neoformans GN=CNBB2960 PE=4 SV=1
          Length = 548

 Score = 40.8 bits (94), Expect = 0.047
 Identities = 31/115 (26%), Positives = 51/115 (44%), Gaps = 4/115 (3%)
 Frame = -2

Query: 509 RKRKWRHGISKEAQKRIDAANRLDMTLLEEIVMIQKQHVI--FRVM--TENVYDVQIKEE 342
           R  + R    K    R D A    M ++E +      + +  F+V+  T NVY V I   
Sbjct: 271 RPARGRSHCPKTIMDRCDRAMSQRMFMIERVPYANAPNQVDFFKVLGSTGNVYTVTIGNF 330

Query: 341 PRCTCPDFQKRECAKKTFVACKHMYYVYAHVLGLQPKEHMVIHQPTFTVIDLAFV 177
           P C CPD+            CKH+ +V+  VL + P++  + +Q   T  ++ +V
Sbjct: 331 PSCDCPDYINGNS------PCKHIIFVFLKVLKV-PEDSSIWYQKGLTAAEVQWV 378


>tr|A7P566|A7P566_VITVI Chromosome chr4 scaffold_6, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00032417001
           PE=4 SV=1
          Length = 233

 Score = 40.4 bits (93), Expect = 0.062
 Identities = 27/106 (25%), Positives = 47/106 (44%), Gaps = 2/106 (1%)
 Frame = -2

Query: 452 ANRLDMTLLEEIVMIQKQHVIFRVM--TENVYDVQIKEEPRCTCPDFQKRECAKKTFVAC 279
           A+R+   +   + ++ +    F V+  T NVY V +   P CTCPD             C
Sbjct: 26  ADRIVRAIRHRLRLLHRSESNFFVLGATGNVYTVTLSTNPSCTCPD---------RTTPC 76

Query: 278 KHMYYVYAHVLGLQPKEHMVIHQPTFTVIDLAFVLGQPRKVKTTMG 141
           KH+ +V+  VLG+   +   + + T     L+ +L +P   +   G
Sbjct: 77  KHILFVFIKVLGVS-LDDSCLRRRTLRPCLLSHLLSKPTSPEAVAG 121