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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP916572
Clone id YMU001_000089_B08
Library
Length 527
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000089_B08.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
GAGAGTTGAAAATGGTAGTGTTACAGCACTAGAAACATGTAAGACCCAAAAGCTGGTCCC
GAGGCCCAATATGAAACCTAGGTAGCGAAGCTCTATATAAAACTCTCTCTCGCATAGAAG
TATACAGCTTAGCAAGGTACAAATATACATGAAAGCGTCAAAACTGAGCGAAGCCCGCAC
CAAACGTACGAGTGACACCTTAAACTAGGCTGGTAGCCTTTGTGCCTTCAACATCTCCTC
AAAGACCATGTCGATGAATGTATCATTCTGCACAAGTCGGAAGAGAGCATCACGGACTCC
TTCCCTACTAATAACTGGCTTACTTGGCAACACGGAATTTGGTGTCAGAGATGGTGATGG
CACAGGTGGAGGGAATGGCTGCAGAAGAGGAGCACCAACTGACGGCTGCAATGGAGGGGG
AGGATGGAGAAAGGTAGGTTGAGATGAAGGTAAAGGAGGAGGCACAAAAAAGTAAGGTTT
CAGAGGTACTTCTAATGATTTGCTGCTTCCTGCCTCACTGACAGGCT
■■Homology search results ■■ -
sp_hit_id Q9SJF3
Definition sp|Q9SJF3|DCP1_ARATH mRNA-decapping enzyme-like protein OS=Arabidopsis thaliana
Align length 32
Score (bit) 32.7
E-value 1.1
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP916572|Adiantum capillus-veneris mRNA, clone:
YMU001_000089_B08.
         (527 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9SJF3|DCP1_ARATH mRNA-decapping enzyme-like protein OS=Arabi...    33   1.1  
sp|Q22811|HM21_CAEEL Homeobox protein ceh-21 OS=Caenorhabditis e...    32   1.4  
sp|Q60890|OLF11_MOUSE Olfactory receptor 11 OS=Mus musculus GN=O...    32   1.9  
sp|Q9FNI7|CSLA2_ARATH Glucomannan 4-beta-mannosyltransferase 2 O...    32   2.4  
sp|Q5JQS5|OR2BB_HUMAN Olfactory receptor 2B11 OS=Homo sapiens GN...    30   5.4  
sp|Q6GDE9|SRAP_STAAR Serine-rich adhesin for platelets OS=Staphy...    30   7.1  
sp|Q9NQN1|OR2S1_HUMAN Olfactory receptor 2S2 OS=Homo sapiens GN=...    30   7.1  
sp|P20236|GBRA3_RAT Gamma-aminobutyric acid receptor subunit alp...    30   9.2  

>sp|Q9SJF3|DCP1_ARATH mRNA-decapping enzyme-like protein
           OS=Arabidopsis thaliana GN=At1g08370 PE=2 SV=2
          Length = 367

 Score = 32.7 bits (73), Expect = 1.1
 Identities = 15/32 (46%), Positives = 21/32 (65%)
 Frame = -3

Query: 318 PVISREGVRDALFRLVQNDTFIDMVFEEMLKA 223
           PVISR+ V++AL  L+Q D FID +   +  A
Sbjct: 333 PVISRDKVKEALLSLLQEDEFIDKITRTLQNA 364


>sp|Q22811|HM21_CAEEL Homeobox protein ceh-21 OS=Caenorhabditis
           elegans GN=ceh-21 PE=2 SV=3
          Length = 495

 Score = 32.3 bits (72), Expect = 1.4
 Identities = 17/47 (36%), Positives = 25/47 (53%)
 Frame = +2

Query: 167 SEARTKRTSDTLN*AGSLCAFNISSKTMSMNVSFCTSRKRASRTPSL 307
           S+A TKR S T   A S C  ++SS +   +  +   + RA+ TP L
Sbjct: 203 SKAATKRQSSTTVRASSTCGSSVSSTSTVSSPDYTAKKGRATETPKL 249


>sp|Q60890|OLF11_MOUSE Olfactory receptor 11 OS=Mus musculus
           GN=Olfr11 PE=2 SV=2
          Length = 313

 Score = 32.0 bits (71), Expect = 1.9
 Identities = 13/42 (30%), Positives = 24/42 (57%)
 Frame = -3

Query: 168 LSFDAFMYICTLLSCILLCEREFYIELRYLGFILGLGTSFWV 43
           +SFD F+ IC  L   ++  +   ++L  + +I+G G S W+
Sbjct: 118 MSFDRFVAICRPLHYSVIMHQRLCLQLAAVSWIIGFGNSVWL 159


>sp|Q9FNI7|CSLA2_ARATH Glucomannan 4-beta-mannosyltransferase 2
           OS=Arabidopsis thaliana GN=CSLA2 PE=2 SV=1
          Length = 534

 Score = 31.6 bits (70), Expect = 2.4
 Identities = 15/35 (42%), Positives = 21/35 (60%)
 Frame = -3

Query: 150 MYICTLLSCILLCEREFYIELRYLGFILGLGTSFW 46
           +YIC L+S +LLCER       Y+G ++ L   FW
Sbjct: 45  VYICLLMSVMLLCERV------YMGIVIVLVKLFW 73


>sp|Q5JQS5|OR2BB_HUMAN Olfactory receptor 2B11 OS=Homo sapiens
           GN=OR2B11 PE=2 SV=1
          Length = 317

 Score = 30.4 bits (67), Expect = 5.4
 Identities = 19/58 (32%), Positives = 30/58 (51%)
 Frame = -3

Query: 183 LVRASLSFDAFMYICTLLSCILLCEREFYIELRYLGFILGLGTSFWVLHVSSAVTLPF 10
           +V A+++ D ++ IC  L   +L  R    +L  L ++ G G SF  + V   V LPF
Sbjct: 117 IVLAAMALDRYVAICKPLHYAVLMHRALCQQLVALAWLSGFGNSF--VQVVLTVQLPF 172


>sp|Q6GDE9|SRAP_STAAR Serine-rich adhesin for platelets
            OS=Staphylococcus aureus (strain MRSA252) GN=sasA PE=3
            SV=1
          Length = 1351

 Score = 30.0 bits (66), Expect = 7.1
 Identities = 18/63 (28%), Positives = 35/63 (55%)
 Frame = +2

Query: 116  RSIQLSKVQIYMKASKLSEARTKRTSDTLN*AGSLCAFNISSKTMSMNVSFCTSRKRASR 295
            +S+ LS  Q    ++  S + + RTS++ + +GS+ A    S ++S + S  TS  +++ 
Sbjct: 1059 KSLSLSTSQSGSTSTSTSTSSSVRTSESQSTSGSMSASQFDSTSISTSFSDSTSDSKSAS 1118

Query: 296  TPS 304
            T S
Sbjct: 1119 TAS 1121


>sp|Q9NQN1|OR2S1_HUMAN Olfactory receptor 2S2 OS=Homo sapiens
           GN=OR2S2 PE=2 SV=2
          Length = 319

 Score = 30.0 bits (66), Expect = 7.1
 Identities = 16/58 (27%), Positives = 31/58 (53%)
 Frame = -3

Query: 183 LVRASLSFDAFMYICTLLSCILLCEREFYIELRYLGFILGLGTSFWVLHVSSAVTLPF 10
           L+ + ++FD ++ IC  L   ++  +  Y+ +    + +G   S  V+H S A+ LPF
Sbjct: 114 LLLSMMAFDRYVAICNPLRYSVIMSKAAYMPMAASSWAIGGAAS--VVHTSLAIQLPF 169


>sp|P20236|GBRA3_RAT Gamma-aminobutyric acid receptor subunit
           alpha-3 OS=Rattus norvegicus GN=Gabra3 PE=2 SV=1
          Length = 493

 Score = 29.6 bits (65), Expect = 9.2
 Identities = 16/50 (32%), Positives = 25/50 (50%)
 Frame = +2

Query: 161 KLSEARTKRTSDTLN*AGSLCAFNISSKTMSMNVSFCTSRKRASRTPSLL 310
           K   A TK+TS T N  G+    N++  T    +S   +   AS TP+++
Sbjct: 383 KTPAAPTKKTSTTFNIVGTTYPINLALDTEFSTISKAAAAPSASSTPTVI 432
tr_hit_id Q7XHS7
Definition tr|Q7XHS7|Q7XHS7_ORYSJ Os07g0249600 protein OS=Oryza sativa subsp. japonica
Align length 31
Score (bit) 47.4
E-value 0.0005
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP916572|Adiantum capillus-veneris mRNA, clone:
YMU001_000089_B08.
         (527 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q7XHS7|Q7XHS7_ORYSJ Os07g0249600 protein OS=Oryza sativa subs...    47   5e-04
tr|A2YJX0|A2YJX0_ORYSI Putative uncharacterized protein OS=Oryza...    47   5e-04
tr|B8LQS3|B8LQS3_PICSI Putative uncharacterized protein OS=Picea...    46   0.001
tr|Q53QH1|Q53QH1_ORYSJ mRNA decapping enzyme, putative, expresse...    44   0.005
tr|Q2QXH6|Q2QXH6_ORYSJ Os12g0156400 protein OS=Oryza sativa subs...    44   0.005
tr|B8BN98|B8BN98_ORYSI Putative uncharacterized protein OS=Oryza...    44   0.005
tr|B8BJ62|B8BJ62_ORYSI Putative uncharacterized protein OS=Oryza...    44   0.005
tr|B6UBI1|B6UBI1_MAIZE Dcp1-like decapping family protein OS=Zea...    44   0.005
tr|B4FIG5|B4FIG5_MAIZE Putative uncharacterized protein OS=Zea m...    44   0.005
tr|A3C8R8|A3C8R8_ORYSJ Putative uncharacterized protein OS=Oryza...    44   0.005
tr|B6T785|B6T785_MAIZE Dcp1-like decapping family protein OS=Zea...    43   0.009
tr|B4FJC9|B4FJC9_MAIZE Putative uncharacterized protein OS=Zea m...    43   0.009
tr|Q38JI6|Q38JI6_SOLTU Putative uncharacterized protein OS=Solan...    42   0.025
tr|Q10AY3|Q10AY3_ORYSJ cDNA clone:J013148J04, full insert sequen...    42   0.025
tr|Q0DLZ5|Q0DLZ5_ORYSJ Os03g0837000 protein (Fragment) OS=Oryza ...    42   0.025
tr|B8AN96|B8AN96_ORYSI Putative uncharacterized protein OS=Oryza...    42   0.025
tr|A9S7I6|A9S7I6_PHYPA Predicted protein OS=Physcomitrella paten...    41   0.032
tr|A9PI85|A9PI85_POPTR Putative uncharacterized protein OS=Popul...    40   0.072
tr|B6TBF0|B6TBF0_MAIZE Dcp1-like decapping family protein OS=Zea...    39   0.12 
tr|B4FW43|B4FW43_MAIZE Putative uncharacterized protein OS=Zea m...    39   0.12 
tr|A9PE94|A9PE94_POPTR Putative uncharacterized protein OS=Popul...    39   0.16 
tr|A7QF74|A7QF74_VITVI Chromosome undetermined scaffold_87, whol...    38   0.36 
tr|A7PP94|A7PP94_VITVI Chromosome chr8 scaffold_23, whole genome...    37   0.47 
tr|Q2B1G2|Q2B1G2_9BACI Permease OS=Bacillus sp. NRRL B-14911 GN=...    35   2.3  
tr|Q8FPP1|Q8FPP1_COREF Putative uncharacterized protein OS=Coryn...    34   4.0  
tr|B4FT08|B4FT08_MAIZE Dcp1-like decapping family protein OS=Zea...    34   4.0  
tr|B6KCF6|B6KCF6_TOXGO Putative uncharacterized protein OS=Toxop...    34   4.0  
tr|A9TRE6|A9TRE6_PHYPA Predicted protein OS=Physcomitrella paten...    33   8.8  

>tr|Q7XHS7|Q7XHS7_ORYSJ Os07g0249600 protein OS=Oryza sativa subsp.
           japonica GN=P0021G06.113 PE=2 SV=1
          Length = 382

 Score = 47.4 bits (111), Expect = 5e-04
 Identities = 21/31 (67%), Positives = 27/31 (87%)
 Frame = -3

Query: 318 PVISREGVRDALFRLVQNDTFIDMVFEEMLK 226
           PV+SRE VRDAL RLV+ND FID+V+ E++K
Sbjct: 351 PVLSREKVRDALLRLVENDDFIDLVYREIVK 381


>tr|A2YJX0|A2YJX0_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_25526 PE=4 SV=1
          Length = 382

 Score = 47.4 bits (111), Expect = 5e-04
 Identities = 21/31 (67%), Positives = 27/31 (87%)
 Frame = -3

Query: 318 PVISREGVRDALFRLVQNDTFIDMVFEEMLK 226
           PV+SRE VRDAL RLV+ND FID+V+ E++K
Sbjct: 351 PVLSREKVRDALLRLVENDDFIDLVYREIVK 381


>tr|B8LQS3|B8LQS3_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 368

 Score = 45.8 bits (107), Expect = 0.001
 Identities = 21/32 (65%), Positives = 26/32 (81%)
 Frame = -3

Query: 318 PVISREGVRDALFRLVQNDTFIDMVFEEMLKA 223
           P+I+R+ VRD L RLVQN+ FIDMV+ EML A
Sbjct: 334 PIITRDKVRDTLARLVQNEHFIDMVYREMLNA 365


>tr|Q53QH1|Q53QH1_ORYSJ mRNA decapping enzyme, putative, expressed
           OS=Oryza sativa subsp. japonica GN=LOC_Os11g05650 PE=4
           SV=1
          Length = 380

 Score = 43.9 bits (102), Expect = 0.005
 Identities = 19/32 (59%), Positives = 26/32 (81%)
 Frame = -3

Query: 318 PVISREGVRDALFRLVQNDTFIDMVFEEMLKA 223
           P+ISR+ V++AL RLVQND FID+V+ E+  A
Sbjct: 347 PIISRDKVKEALLRLVQNDQFIDLVYRELQNA 378


>tr|Q2QXH6|Q2QXH6_ORYSJ Os12g0156400 protein OS=Oryza sativa subsp.
           japonica GN=Os12g0156400 PE=2 SV=2
          Length = 374

 Score = 43.9 bits (102), Expect = 0.005
 Identities = 19/33 (57%), Positives = 28/33 (84%)
 Frame = -3

Query: 321 KPVISREGVRDALFRLVQNDTFIDMVFEEMLKA 223
           +PVISR+ V+DAL RLVQND FI+++++E+  A
Sbjct: 340 EPVISRDKVKDALLRLVQNDEFINLLYQELQNA 372


>tr|B8BN98|B8BN98_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_37531 PE=4 SV=1
          Length = 374

 Score = 43.9 bits (102), Expect = 0.005
 Identities = 19/33 (57%), Positives = 28/33 (84%)
 Frame = -3

Query: 321 KPVISREGVRDALFRLVQNDTFIDMVFEEMLKA 223
           +PVISR+ V+DAL RLVQND FI+++++E+  A
Sbjct: 340 EPVISRDKVKDALLRLVQNDEFINLLYQELQNA 372


>tr|B8BJ62|B8BJ62_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_35166 PE=4 SV=1
          Length = 332

 Score = 43.9 bits (102), Expect = 0.005
 Identities = 19/32 (59%), Positives = 26/32 (81%)
 Frame = -3

Query: 318 PVISREGVRDALFRLVQNDTFIDMVFEEMLKA 223
           P+ISR+ V++AL RLVQND FID+V+ E+  A
Sbjct: 299 PIISRDKVKEALLRLVQNDQFIDLVYRELQNA 330


>tr|B6UBI1|B6UBI1_MAIZE Dcp1-like decapping family protein OS=Zea
           mays PE=2 SV=1
          Length = 382

 Score = 43.9 bits (102), Expect = 0.005
 Identities = 19/33 (57%), Positives = 26/33 (78%)
 Frame = -3

Query: 318 PVISREGVRDALFRLVQNDTFIDMVFEEMLKAQ 220
           P +SR+ VRDAL RLV+ND FID+V+ E++  Q
Sbjct: 350 PALSRDKVRDALLRLVENDEFIDLVYGEIMNRQ 382


>tr|B4FIG5|B4FIG5_MAIZE Putative uncharacterized protein OS=Zea mays
           PE=2 SV=1
          Length = 382

 Score = 43.9 bits (102), Expect = 0.005
 Identities = 19/33 (57%), Positives = 26/33 (78%)
 Frame = -3

Query: 318 PVISREGVRDALFRLVQNDTFIDMVFEEMLKAQ 220
           P +SR+ VRDAL RLV+ND FID+V+ E++  Q
Sbjct: 350 PALSRDKVRDALLRLVENDEFIDLVYGEIMNRQ 382


>tr|A3C8R8|A3C8R8_ORYSJ Putative uncharacterized protein OS=Oryza
           sativa subsp. japonica GN=OsJ_031690 PE=4 SV=1
          Length = 334

 Score = 43.9 bits (102), Expect = 0.005
 Identities = 19/32 (59%), Positives = 26/32 (81%)
 Frame = -3

Query: 318 PVISREGVRDALFRLVQNDTFIDMVFEEMLKA 223
           P+ISR+ V++AL RLVQND FID+V+ E+  A
Sbjct: 301 PIISRDKVKEALLRLVQNDQFIDLVYRELQNA 332