BP916574
Clone id YMU001_000089_B10
Library
Length 575
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000089_B10.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
CATGGCAATTTGAAAAGATTCAGGTTCAGCATTGCATGGCCACGCTTCCCTCATGCAAAC
CCATAACCACACCCTCATCACCTCACCTACTCTACATGGGTGATACACACTACACACTAC
ACACCTACACTACCTCTCACCCTCCCTCTCTCCGTCATCACAATAGGCAACTACACACCC
ACACAAGTGGTCATCGGCTGTCTCTGTCTGTAGTTGGACTACATCTATCTCTCTCTCGCT
TGTCAGTAATTGATGGCACTCACAAAGCCCTACCTTGATTTCTATCCATCTCAACAAACG
TTACTTCTTTTCACCTACAATCACACATGCAATCCTATCATCAGCCAGTTGCTCGCCACT
AGGTCGCTTTGCAAGCCTACAGGCTCAATTGCATGGCTTGCAATCTTCATCTATTTTCAC
CGACTTTTGCATGCGCTAGCCTCAATCCATGGCCACCTTTCAAAAATCAATGGCCAGTAT
CCACATGCACTATGCAGGCCGCACCAAACCCAACCACCATTTTCTCTTTTAGGCACCCAC
ATCTACCCGAGGCTTTGAAGCTTCCTTCTCTCTCT
■■Homology search results ■■ -
sp_hit_id Q9J5C7
Definition sp|Q9J5C7|V093_FOWPV Probable FAD-linked sulfhydryl oxidase FPV093 OS=Fowlpox virus
Align length 44
Score (bit) 30.4
E-value 6.3
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP916574|Adiantum capillus-veneris mRNA, clone:
YMU001_000089_B10.
(562 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q9J5C7|V093_FOWPV Probable FAD-linked sulfhydryl oxidase FPV0... 30 6.3
sp|Q9Y620|RA54B_HUMAN DNA repair and recombination protein RAD54... 30 6.3
sp|Q9PL47|PMPE_CHLMU Probable outer membrane protein pmpE OS=Chl... 30 6.3
sp|Q10571|MN1_HUMAN Probable tumor suppressor protein MN1 OS=Hom... 30 6.3
sp|Q03376|BAR3_CHITE Balbiani ring protein 3 OS=Chironomus tenta... 30 6.3
sp|Q49429|P200_MYCGE Protein P200 OS=Mycoplasma genitalium GN=MG... 30 8.1
sp|P0C6A2|MAMD1_MOUSE Mastermind-like domain-containing protein ... 30 8.2

>sp|Q9J5C7|V093_FOWPV Probable FAD-linked sulfhydryl oxidase FPV093
OS=Fowlpox virus GN=FPV093 PE=3 SV=1
Length = 94

Score = 30.4 bits (67), Expect = 6.3
Identities = 15/44 (34%), Positives = 20/44 (45%)
Frame = +1

Query: 382 GSIAWLAIFIYFHRLLHALASIHGHLSKINGQYPHALCRPHQTQ 513
GS W+ IFI + H + + HL I P A C+ H Q
Sbjct: 7 GSSFWIVIFIIITKFKHDIETCKRHLYNICKALPCAECKDHALQ 50


>sp|Q9Y620|RA54B_HUMAN DNA repair and recombination protein RAD54B
OS=Homo sapiens GN=RAD54B PE=1 SV=1
Length = 910

Score = 30.4 bits (67), Expect = 6.3
Identities = 20/78 (25%), Positives = 39/78 (50%), Gaps = 2/78 (2%)
Frame = +1

Query: 256 ALTKPYLDFYPSQQTLLLFTYNHTCN-PIISQLLATRSLCKPTGSIAWLAIFIYFHRLLH 432
+L K L +P+ LLFT + ++S+LLA +PT + ++ + +L
Sbjct: 618 SLYKGLLSVFPADYNPLLFTEKESGKLQVLSKLLAVIHELRPTEKVVLVSNYTQTLNILQ 677

Query: 433 ALASIHGH-LSKINGQYP 483
+ HG+ ++++GQ P
Sbjct: 678 EVCKRHGYAYTRLDGQTP 695


>sp|Q9PL47|PMPE_CHLMU Probable outer membrane protein pmpE
OS=Chlamydia muridarum GN=pmpE PE=2 SV=1
Length = 976

Score = 30.4 bits (67), Expect = 6.3
Identities = 18/40 (45%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = +2

Query: 311 SPTITHAILSSASC-SPLGRFASLQAQLHGLQSSSIFTDF 427
SP HA+ S + L RFA+LQ Q HG SSS F ++
Sbjct: 928 SPASRHALAYKISQKTQLLRFATLQLQYHGYYSSSTFCNY 967


>sp|Q10571|MN1_HUMAN Probable tumor suppressor protein MN1 OS=Homo
sapiens GN=MN1 PE=1 SV=3
Length = 1320

Score = 30.4 bits (67), Expect = 6.3
Identities = 23/77 (29%), Positives = 36/77 (46%)
Frame = +2

Query: 323 THAILSSASCSPLGRFASLQAQLHGLQSSSIFTDFCMR*PQSMATFQKSMASIHMHYAGR 502
+HA+ A C PL + + A HGL SSS + T Q ++ S+ +Y G
Sbjct: 183 SHAV--PAPCLPLDQSPNRAASFHGLPSSSGSDSHSLE--PRRVTNQGAVDSLEYNYPGE 238

Query: 503 TKPNHHFLF*APTSTRG 553
P+ HF +P+ + G
Sbjct: 239 A-PSGHFDMFSPSDSEG 254


>sp|Q03376|BAR3_CHITE Balbiani ring protein 3 OS=Chironomus tentans
GN=BR3 PE=2 SV=1
Length = 1700

Score = 30.4 bits (67), Expect = 6.3
Identities = 18/72 (25%), Positives = 30/72 (41%)
Frame = -2

Query: 294 LRWIEIKVGLCECHQLLTSEREIDVVQLQTETADDHLCGCVVAYCDDGEREGER*CRCVV 115
L+W + K C C + ++E V + + CGC C D ++ + C+C
Sbjct: 236 LKWDDDKCS-CACPAKMEEKKEKCVESGKIWNPNTCECGCAQLNCPDNKKANKETCQC-E 293

Query: 114 CSVYHPCRVGEV 79
C C G+V
Sbjct: 294 CKEVKKCNGGQV 305


>sp|Q49429|P200_MYCGE Protein P200 OS=Mycoplasma genitalium GN=MG386
PE=3 SV=1
Length = 1616

Score = 30.0 bits (66), Expect = 8.1
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = -3

Query: 518 GGWVWCGLHSACGYWPLIFERW 453
G W+W G + G W L+ E+W
Sbjct: 1497 GEWIWYGFYDESGDWVLVDEQW 1518


>sp|P0C6A2|MAMD1_MOUSE Mastermind-like domain-containing protein 1
OS=Mus musculus GN=Mamld1 PE=2 SV=1
Length = 803

Score = 30.0 bits (66), Expect = 8.2
Identities = 16/55 (29%), Positives = 26/55 (47%)
Frame = +1

Query: 370 CKPTGSIAWLAIFIYFHRLLHALASIHGHLSKINGQYPHALCRPHQTQPPFSLLG 534
C T + WL + H+ ++L S HGH+ N + C+ + +PP LG
Sbjct: 676 CAWTSTALWLE---HQHQQWNSLTSTHGHVPPSNLTHVDKACKLGEARPPHVSLG 727


tr_hit_id B5HHW0
Definition tr|B5HHW0|B5HHW0_STRPR Predicted protein OS=Streptomyces pristinaespiralis ATCC 25486
Align length 40
Score (bit) 35.0
E-value 2.8
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP916574|Adiantum capillus-veneris mRNA, clone:
YMU001_000089_B10.
(562 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|B5HHW0|B5HHW0_STRPR Predicted protein OS=Streptomyces pristin... 35 2.8
tr|Q4SAB0|Q4SAB0_TETNG Chromosome 19 SCAF14691, whole genome sho... 34 4.8
tr|A1AVA3|A1AVA3_RUTMC Periplasmic or secreted lipoprotein-like ... 33 8.2
tr|Q7SEI5|Q7SEI5_NEUCR Putative uncharacterized protein OS=Neuro... 33 8.2

>tr|B5HHW0|B5HHW0_STRPR Predicted protein OS=Streptomyces
pristinaespiralis ATCC 25486 GN=SSDG_04786 PE=4 SV=1
Length = 91

Score = 35.0 bits (79), Expect = 2.8
Identities = 17/40 (42%), Positives = 22/40 (55%)
Frame = -2

Query: 264 CECHQLLTSEREIDVVQLQTETADDHLCGCVVAYCDDGER 145
CECH T ++DVV+L A+ GC V + DGER
Sbjct: 6 CECHSRATEGADVDVVELMEWLAEQ---GCSVVFKADGER 42


>tr|Q4SAB0|Q4SAB0_TETNG Chromosome 19 SCAF14691, whole genome
shotgun sequence OS=Tetraodon nigroviridis
GN=GSTENG00021538001 PE=4 SV=1
Length = 333

Score = 34.3 bits (77), Expect = 4.8
Identities = 18/68 (26%), Positives = 27/68 (39%)
Frame = -2

Query: 288 WIEIKVGLCECHQLLTSEREIDVVQLQTETADDHLCGCVVAYCDDGEREGER*CRCVVCS 109
++E + C C + +QL + D L GC+ Y + E GE C C C
Sbjct: 132 FLETHLQCCNCGSAQIKSSHLLNLQLPVKEEHDSLEGCLTTYFELQELRGENCCFCPKCG 191

Query: 108 VYHPCRVG 85
P + G
Sbjct: 192 TQTPSKWG 199


>tr|A1AVA3|A1AVA3_RUTMC Periplasmic or secreted lipoprotein-like
OS=Ruthia magnifica subsp. Calyptogena magnifica
GN=Rmag_0058 PE=3 SV=1
Length = 252

Score = 33.5 bits (75), Expect = 8.2
Identities = 21/57 (36%), Positives = 27/57 (47%)
Frame = +2

Query: 254 WHSQSPTLISIHLNKRYFFSPTITHAILSSASCSPLGRFASLQAQLHGLQSSSIFTD 424
W+S+ PTL +HLN F T I S + +AS QAQL S IF +
Sbjct: 59 WYSEDPTLSDVHLN---FMVYNKTVLITGEVSTPEIRIYASKQAQLQVPNISQIFNE 112


>tr|Q7SEI5|Q7SEI5_NEUCR Putative uncharacterized protein OS=Neurospora
crassa GN=NCU09740 PE=4 SV=2
Length = 2725

Score = 33.5 bits (75), Expect = 8.2
Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Frame = +2

Query: 215 WTTSISLSLVSN*WHSQSPTLISIHLNKRYFFSPTITHAILSSASCSPLGRFASLQAQLH 394
WTT L ++ ++ +++ L+K F SPT+ A+L G F LQ L+
Sbjct: 1995 WTTCACLESINECEFLEAVEMLNEFLDKLDFHSPTVRRALLDGQPSKWDGAFEGLQPLLY 2054

Query: 395 -GLQSSS 412
GL+SSS
Sbjct: 2055 KGLRSSS 2061