BP916578 |
Clone id |
YMU001_000089_C03 |
Library |
YMU01 |
Length |
532 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000089_C03. |
Accession |
BP916578 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
GTATTCGGTTAGTGGCATTGGTCGGGTTGTAGGCTCAACGACTACCACCCTTCAAGAGAT GAAGGAAACTTTGGGAAGGAATGCAGAAGCAATTTTAAAGTCCCTTCTCGATAATCAGCG GGTCCTCTTGCTTTGCGAAGTTCTAGTTCGAAGGTACTTCATGCTGACTGCCACCGACCT CGAGGGATGGAATGATGATGCGGAAGCTTATTATCATGAACATGATATGGTTCAGTGGAA AGACGAACTACGGCCGTGTGCTGAATCATTGTACCTCATTCTTTTTGAAAAATACCGGGA GATATTGGCTCCACTTGTTGTTCAGATCCTAAAGCAGGCATCTGAGGATTGCCCTCCTGC AGGAGAGGATAGAGAGATTGAAATTACGCAGAAACTGTTACTGAAAGAAGCGGCGTACAA TGCTGTTGGGGTTGCAAATTTTGATCTTCATCACTCTATTGATTTTGAATCTTGGTTCAA GGGTACTCTTGTCCGAGAGCTCAGGAACAGACATTCGAATGCCCGTATTCTT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q8K2V6 |
Definition |
sp|Q8K2V6|IPO11_MOUSE Importin-11 OS=Mus musculus |
Align length |
127 |
Score (bit) |
87.8 |
E-value |
3.0e-17 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9TXK6 |
Definition |
tr|A9TXK6|A9TXK6_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
177 |
Score (bit) |
192.0 |
E-value |
7.0e-48 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP916578|Adiantum capillus-veneris mRNA, clone: YMU001_000089_C03. (532 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9TXK6|A9TXK6_PHYPA Predicted protein OS=Physcomitrella paten... 192 7e-48 tr|A9SVR7|A9SVR7_PHYPA Predicted protein OS=Physcomitrella paten... 189 8e-47 tr|Q9SR95|Q9SR95_ARATH T16O11.8 protein OS=Arabidopsis thaliana ... 152 1e-35 tr|A7QHN3|A7QHN3_VITVI Chromosome chr8 scaffold_99, whole genome... 149 1e-34 tr|Q84NP8|Q84NP8_ORYSJ Putative Ran binding protein 11-like OS=O... 137 5e-31 tr|Q0D3D0|Q0D3D0_ORYSJ Os07g0693400 protein OS=Oryza sativa subs... 137 5e-31 tr|B8B6A9|B8B6A9_ORYSI Putative uncharacterized protein OS=Oryza... 137 5e-31 tr|Q10MW7|Q10MW7_ORYSJ Importin-beta N-terminal domain containin... 104 3e-21 tr|A3AGX4|A3AGX4_ORYSJ Putative uncharacterized protein OS=Oryza... 104 3e-21 tr|B8ALM2|B8ALM2_ORYSI Putative uncharacterized protein OS=Oryza... 103 7e-21 tr|A7SZB4|A7SZB4_NEMVE Predicted protein OS=Nematostella vectens... 94 4e-18 tr|B6M621|B6M621_BRAFL Putative uncharacterized protein OS=Branc... 89 2e-16 tr|Q8BXQ4|Q8BXQ4_MOUSE Putative uncharacterized protein OS=Mus m... 88 3e-16 tr|B4DZ73|B4DZ73_HUMAN cDNA FLJ59791, highly similar to Importin... 87 7e-16 tr|B4LJG2|B4LJG2_DROVI GJ20801 OS=Drosophila virilis GN=GJ20801 ... 86 1e-15 tr|B3RSI9|B3RSI9_TRIAD Putative uncharacterized protein OS=Trich... 86 1e-15 tr|Q17DX6|Q17DX6_AEDAE Importin 11 (Imp11) (Ran-binding protein ... 86 2e-15 tr|B4KTA6|B4KTA6_DROMO GI21200 OS=Drosophila mojavensis GN=GI212... 86 2e-15 tr|B0WJI0|B0WJI0_CULQU Importin-11 OS=Culex quinquefasciatus GN=... 84 6e-15 tr|Q6DKF7|Q6DKF7_DANRE Novel protein similar to vertebrate impor... 83 8e-15 tr|B0S6M2|B0S6M2_DANRE Novel protein similar to vertebrate impor... 83 8e-15 tr|Q28C38|Q28C38_XENTR Importin 11 (RanBP11) OS=Xenopus tropical... 82 1e-14 tr|B5DDW6|B5DDW6_XENTR Ipo11 protein OS=Xenopus tropicalis GN=ip... 82 1e-14 tr|Q6NTP9|Q6NTP9_XENLA MGC83107 protein OS=Xenopus laevis GN=ipo... 80 9e-14 tr|Q7QD58|Q7QD58_ANOGA AGAP002970-PA OS=Anopheles gambiae GN=AGA... 79 1e-13 tr|B4JW31|B4JW31_DROGR GH22822 OS=Drosophila grimshawi GN=GH2282... 79 2e-13 tr|Q7K0Q2|Q7K0Q2_DROME Ranbp11 OS=Drosophila melanogaster GN=Ran... 78 2e-13 tr|A2RVD5|A2RVD5_DROME IP06983p (Fragment) OS=Drosophila melanog... 78 2e-13 tr|B3MCG7|B3MCG7_DROAN GF11495 OS=Drosophila ananassae GN=GF1149... 77 4e-13 tr|B4QGX4|B4QGX4_DROSI GD11132 OS=Drosophila simulans GN=GD11132... 75 2e-12
>tr|A9TXK6|A9TXK6_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_152314 PE=4 SV=1 Length = 737
Score = 192 bits (489), Expect = 7e-48 Identities = 99/177 (55%), Positives = 121/177 (68%) Frame = +2
Query: 2 YSVSGIGRVVGSTTTTLQEMKETLGRNAEAILKSLLDNQXXXXXXXXXXXXYFMLTATDL 181 Y + GRVVG +T TL+E K L R AE IL SLLD Q YF+LT DL Sbjct: 283 YRPNKSGRVVGQSTPTLEEAKGNLARQAEEILVSLLDKQRLVVLCEIIIRRYFVLTPADL 342
Query: 182 EGWNDDAEAYYHEHDMVQWKDELRPCAESLYLILFEKYREILAPLVVQILKQASEDCPPA 361 E W++D E ++HE D Q+KD+LRP AESLYL LFE +RE+LAP+VV ILKQASE CPPA Sbjct: 343 EEWSNDPELFHHEQDAGQYKDKLRPSAESLYLSLFESHRELLAPVVVSILKQASEGCPPA 402
Query: 362 GEDREIEITQKLLLKEAAYNAVGVANFDLHHSIDFESWFKGTLVRELRNRHSNARIL 532 +I+IT LLLK+AAY+AVG A +DLH IDF+SW++ LV E+ N H N RIL Sbjct: 403 APGADIQITPALLLKDAAYDAVGTAYYDLHDYIDFKSWWEAALVHEISNLHPNGRIL 459
>tr|A9SVR7|A9SVR7_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_136021 PE=4 SV=1 Length = 736
Score = 189 bits (480), Expect = 8e-47 Identities = 99/178 (55%), Positives = 123/178 (69%), Gaps = 1/178 (0%) Frame = +2
Query: 2 YSVSGIGRVVGSTTTTLQEMKETLGRNAEAILKSLLDNQXXXXXXXXXXXXYFMLTATDL 181 Y + GRVVG +TTT++E K L R AE I+ SLL+ Q YF+LT DL Sbjct: 282 YRPNKTGRVVGQSTTTMEETKANLARQAEEIVMSLLNKQRLVVLCEILVRRYFVLTPADL 341
Query: 182 EGWNDDAEAYYHEHDMVQWKDELRPCAESLYLILFEKYREILAPLVVQILKQASEDCPP- 358 E W D E ++HE D+VQ+K+++RPCAESLYL LFE +RE+LAP+VV ILKQASE CP Sbjct: 342 EEWAQDPELFHHEQDLVQYKEKIRPCAESLYLSLFECHRELLAPVVVGILKQASEACPAV 401
Query: 359 AGEDREIEITQKLLLKEAAYNAVGVANFDLHHSIDFESWFKGTLVRELRNRHSNARIL 532 AG D ++IT LLLKE AYNAVG A +DLH IDF+SW++G LV E+ N H N RIL Sbjct: 402 AGAD--VQITPALLLKETAYNAVGAAYYDLHDYIDFKSWWEGALVHEMSNLHPNGRIL 457
>tr|Q9SR95|Q9SR95_ARATH T16O11.8 protein OS=Arabidopsis thaliana GN=At3g08960 PE=4 SV=1 Length = 754
Score = 152 bits (384), Expect = 1e-35 Identities = 74/177 (41%), Positives = 106/177 (59%) Frame = +2
Query: 2 YSVSGIGRVVGSTTTTLQEMKETLGRNAEAILKSLLDNQXXXXXXXXXXXXYFMLTATDL 181 Y S GRV+ T ++ K+ I+ SLL N+ YF+LTA+DL Sbjct: 282 YKPSRTGRVMDDNGDTFEQRKKNASNTVGGIVSSLLPNERIVLLCNVLVRRYFVLTASDL 341
Query: 182 EGWNDDAEAYYHEHDMVQWKDELRPCAESLYLILFEKYREILAPLVVQILKQASEDCPPA 361 E W + E+++HE DM+QW ++LRPCAE+LY++LFE Y ++L P+VV IL++A +CPP+ Sbjct: 342 EEWYQNPESFHHEQDMIQWTEKLRPCAEALYMVLFENYSQLLGPIVVSILQEAMNNCPPS 401
Query: 362 GEDREIEITQKLLLKEAAYNAVGVANFDLHHSIDFESWFKGTLVRELRNRHSNARIL 532 EIT LLLK+AAY A ++L + ++F WF G L EL N H N RI+ Sbjct: 402 ----VTEITPALLLKDAAYAATAYVYYELSNYLNFRDWFNGALSLELSNDHPNRRII 454
>tr|A7QHN3|A7QHN3_VITVI Chromosome chr8 scaffold_99, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00038854001 PE=4 SV=1 Length = 1011
Score = 149 bits (375), Expect = 1e-34 Identities = 73/177 (41%), Positives = 108/177 (61%) Frame = +2
Query: 2 YSVSGIGRVVGSTTTTLQEMKETLGRNAEAILKSLLDNQXXXXXXXXXXXXYFMLTATDL 181 Y S GRV+ T+++MK+ + +L SLL N+ YF+L+A+DL Sbjct: 355 YKPSLTGRVIDENRVTIEQMKKNISSIVGGVLTSLLPNERIVLLCNILIRRYFVLSASDL 414
Query: 182 EGWNDDAEAYYHEHDMVQWKDELRPCAESLYLILFEKYREILAPLVVQILKQASEDCPPA 361 E W + E+++HE DMVQW ++LRPCAE+LY++LFE + ++L P+VV IL++A CP + Sbjct: 415 EEWYQNPESFHHEQDMVQWTEKLRPCAEALYIVLFENHSQLLGPVVVSILQEAMRGCPTS 474
Query: 362 GEDREIEITQKLLLKEAAYNAVGVANFDLHHSIDFESWFKGTLVRELRNRHSNARIL 532 EIT LLLK+AAY+A ++L + + F+ WF G L EL N H N RI+ Sbjct: 475 ----VTEITPGLLLKDAAYSAAAHVYYELSNYLSFKDWFNGALSLELSNDHPNMRII 527
>tr|Q84NP8|Q84NP8_ORYSJ Putative Ran binding protein 11-like OS=Oryza sativa subsp. japonica GN=P0034A04.128 PE=4 SV=1 Length = 987
Score = 137 bits (344), Expect = 5e-31 Identities = 69/179 (38%), Positives = 108/179 (60%), Gaps = 2/179 (1%) Frame = +2
Query: 2 YSVSGIGRVVGSTTT--TLQEMKETLGRNAEAILKSLLDNQXXXXXXXXXXXXYFMLTAT 175 Y S GRV+ ++ +L++ K+ G A +LK +L YF+ TA Sbjct: 336 YKPSPTGRVINESSQPLSLEQRKKNFGAVASDMLKIVLPGDRVMLLCNILIRRYFIYTAK 395
Query: 176 DLEGWNDDAEAYYHEHDMVQWKDELRPCAESLYLILFEKYREILAPLVVQILKQASEDCP 355 DLE W+++ E+++HE ++VQW ++ RPCAE+L++++FE YRE LAP+VV IL++A P Sbjct: 396 DLEEWSENPESFHHEQNLVQWTEKQRPCAEALFIVIFENYREQLAPVVVSILREAMALSP 455
Query: 356 PAGEDREIEITQKLLLKEAAYNAVGVANFDLHHSIDFESWFKGTLVRELRNRHSNARIL 532 P E ++T +LLK+AAY A G ++L + + F WF G+L E+ N H N RI+ Sbjct: 456 PL----ETDVTAGMLLKDAAYTAAGHVYYELSNYLSFNEWFHGSLSIEISNGHPNMRII 510
>tr|Q0D3D0|Q0D3D0_ORYSJ Os07g0693400 protein OS=Oryza sativa subsp. japonica GN=Os07g0693400 PE=4 SV=1 Length = 957
Score = 137 bits (344), Expect = 5e-31 Identities = 69/179 (38%), Positives = 108/179 (60%), Gaps = 2/179 (1%) Frame = +2
Query: 2 YSVSGIGRVVGSTTT--TLQEMKETLGRNAEAILKSLLDNQXXXXXXXXXXXXYFMLTAT 175 Y S GRV+ ++ +L++ K+ G A +LK +L YF+ TA Sbjct: 294 YKPSPTGRVINESSQPLSLEQRKKNFGAVASDMLKIVLPGDRVMLLCNILIRRYFIYTAK 353
Query: 176 DLEGWNDDAEAYYHEHDMVQWKDELRPCAESLYLILFEKYREILAPLVVQILKQASEDCP 355 DLE W+++ E+++HE ++VQW ++ RPCAE+L++++FE YRE LAP+VV IL++A P Sbjct: 354 DLEEWSENPESFHHEQNLVQWTEKQRPCAEALFIVIFENYREQLAPVVVSILREAMALSP 413
Query: 356 PAGEDREIEITQKLLLKEAAYNAVGVANFDLHHSIDFESWFKGTLVRELRNRHSNARIL 532 P E ++T +LLK+AAY A G ++L + + F WF G+L E+ N H N RI+ Sbjct: 414 PL----ETDVTAGMLLKDAAYTAAGHVYYELSNYLSFNEWFHGSLSIEISNGHPNMRII 468
>tr|B8B6A9|B8B6A9_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_27439 PE=4 SV=1 Length = 1018
Score = 137 bits (344), Expect = 5e-31 Identities = 69/179 (38%), Positives = 108/179 (60%), Gaps = 2/179 (1%) Frame = +2
Query: 2 YSVSGIGRVVGSTTT--TLQEMKETLGRNAEAILKSLLDNQXXXXXXXXXXXXYFMLTAT 175 Y S GRV+ ++ +L++ K+ G A +LK +L YF+ TA Sbjct: 355 YKPSPTGRVINESSQPLSLEQRKKNFGAVASDMLKIVLPGDRVMLLCNILIRRYFIYTAK 414
Query: 176 DLEGWNDDAEAYYHEHDMVQWKDELRPCAESLYLILFEKYREILAPLVVQILKQASEDCP 355 DLE W+++ E+++HE ++VQW ++ RPCAE+L++++FE YRE LAP+VV IL++A P Sbjct: 415 DLEEWSENPESFHHEQNLVQWTEKQRPCAEALFIVIFENYREQLAPVVVSILREAMALSP 474
Query: 356 PAGEDREIEITQKLLLKEAAYNAVGVANFDLHHSIDFESWFKGTLVRELRNRHSNARIL 532 P E ++T +LLK+AAY A G ++L + + F WF G+L E+ N H N RI+ Sbjct: 475 PL----ETDVTAGMLLKDAAYTAAGHVYYELSNYLSFNEWFHGSLSIEISNGHPNMRII 529
>tr|Q10MW7|Q10MW7_ORYSJ Importin-beta N-terminal domain containing protein OS=Oryza sativa subsp. japonica GN=LOC_Os03g18190 PE=4 SV=1 Length = 1032
Score = 104 bits (259), Expect = 3e-21 Identities = 59/173 (34%), Positives = 89/173 (51%) Frame = +2
Query: 14 GIGRVVGSTTTTLQEMKETLGRNAEAILKSLLDNQXXXXXXXXXXXXYFMLTATDLEGWN 193 G V S + K L A +++ S+L +F+ TATD+ W+ Sbjct: 358 GFEAVGSSEHAIFDQRKNNLSATASSMVMSVLPADRIMLLCDILIRRHFIYTATDMNEWH 417
Query: 194 DDAEAYYHEHDMVQWKDELRPCAESLYLILFEKYREILAPLVVQILKQASEDCPPAGEDR 373 + E+++HE +++Q ++ RPCAE+L++ILF+ Y LAP V I+ PP Sbjct: 418 SNPESFHHEQNLLQCTEKRRPCAEALFIILFDNYGVQLAPFVASIIHDVKAVSPPL---- 473
Query: 374 EIEITQKLLLKEAAYNAVGVANFDLHHSIDFESWFKGTLVRELRNRHSNARIL 532 EIEIT +LLKEAAY A G +L + F+ WF G L +L N + N I+ Sbjct: 474 EIEITAGMLLKEAAYTAAGHVFDELSKYLSFDEWFCGYLSIDLSNGNPNMCII 526
>tr|A3AGX4|A3AGX4_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_010046 PE=4 SV=1 Length = 1046
Score = 104 bits (259), Expect = 3e-21 Identities = 59/173 (34%), Positives = 89/173 (51%) Frame = +2
Query: 14 GIGRVVGSTTTTLQEMKETLGRNAEAILKSLLDNQXXXXXXXXXXXXYFMLTATDLEGWN 193 G V S + K L A +++ S+L +F+ TATD+ W+ Sbjct: 372 GFEAVGSSEHAIFDQRKNNLSATASSMVMSVLPADRIMLLCDILIRRHFIYTATDMNEWH 431
Query: 194 DDAEAYYHEHDMVQWKDELRPCAESLYLILFEKYREILAPLVVQILKQASEDCPPAGEDR 373 + E+++HE +++Q ++ RPCAE+L++ILF+ Y LAP V I+ PP Sbjct: 432 SNPESFHHEQNLLQCTEKRRPCAEALFIILFDNYGVQLAPFVASIIHDVKAVSPPL---- 487
Query: 374 EIEITQKLLLKEAAYNAVGVANFDLHHSIDFESWFKGTLVRELRNRHSNARIL 532 EIEIT +LLKEAAY A G +L + F+ WF G L +L N + N I+ Sbjct: 488 EIEITAGMLLKEAAYTAAGHVFDELSKYLSFDEWFCGYLSIDLSNGNPNMCII 540
>tr|B8ALM2|B8ALM2_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_11118 PE=4 SV=1 Length = 1013
Score = 103 bits (256), Expect = 7e-21 Identities = 59/173 (34%), Positives = 89/173 (51%) Frame = +2
Query: 14 GIGRVVGSTTTTLQEMKETLGRNAEAILKSLLDNQXXXXXXXXXXXXYFMLTATDLEGWN 193 G V S + K L A +++ S+L +F+ TATD+ W+ Sbjct: 358 GFEAVGSSEHAIFDQRKNNLSATASSMVMSVLPADRIMLLCDILIRRHFIYTATDMIEWH 417
Query: 194 DDAEAYYHEHDMVQWKDELRPCAESLYLILFEKYREILAPLVVQILKQASEDCPPAGEDR 373 + E+++HE +++Q ++ RPCAE+L++ILF+ Y LAP V I+ PP Sbjct: 418 SNPESFHHEQNLLQCTEKRRPCAEALFIILFDNYGVQLAPFVASIIHDVKAVSPPL---- 473
Query: 374 EIEITQKLLLKEAAYNAVGVANFDLHHSIDFESWFKGTLVRELRNRHSNARIL 532 EIEIT +LLKEAAY A G +L + F+ WF G L +L N + N I+ Sbjct: 474 EIEITAGMLLKEAAYTAAGHVFDELSKYLSFDEWFCGYLSIDLSNGNPNMCII 526
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