BP916582
Clone id YMU001_000089_C07
Library
Length 535
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000089_C07.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
GAGGATAGTGAGGAGGATTCTCCAAGTTAAATGTGTGAGATGCCAATGCATACCAATTAG
GCTGAATCCTCTGCCTTTAGAGGCTCCCATTGACAAGGTGCTGTGAGGACCCAAGGAATA
TTTTGGCCAATAGTAGGATTCGGGTAGCACAGACACTGCTCAAACCAGAGCTTATCAAGT
GGTGCAGGGGAAAAGGACAGTACAAGGGGATTGCCTTAATATCTGCATTTGCTTCCAGCA
TGCAGGAGGAACTCCTTCAGCTTCATTATCATTTATTCTTTTGTCCAAGTCCCACAACAA
TATCAACCAGTGGAGTTGGGGTGCAGTTGCTTTTCTGTAAGAACATACAAGCAGCACCCT
ATTATAGACGAGGAGCAACTGCTGCTCACAAAATTTTGGTAGAGTGAGTCGATGGTCCAT
CTATCAGATTTTCAGTAAAATCTTGTTCTGGTAGATACATTCCATGTAATTTATCAACAT
GTTTATGTACAAGTTCAGCAGCCCTATCATTTGGAGCCTCCAAGAGTGAGGTGTT
■■Homology search results ■■ -
sp_hit_id Q97T80
Definition sp|Q97T80|ZMPC_STRPN Zinc metalloprotease zmpC OS=Streptococcus pneumoniae
Align length 34
Score (bit) 31.2
E-value 3.3
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP916582|Adiantum capillus-veneris mRNA, clone:
YMU001_000089_C07.
(535 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q97T80|ZMPC_STRPN Zinc metalloprotease zmpC OS=Streptococcus ... 31 3.3
sp|Q8GVE3|FLRT_CITMA Flavanone 7-O-glucoside 2''-O-beta-L-rhamno... 30 5.6
sp|Q50863|RFBB_MYXXA O-antigen export system ATP-binding protein... 30 7.3
sp|Q60612|AA1R_MOUSE Adenosine receptor A1 OS=Mus musculus GN=Ad... 30 7.3
sp|Q6CVK3|SPT6_KLULA Transcription elongation factor SPT6 OS=Klu... 30 9.5
sp|P25099|AA1R_RAT Adenosine receptor A1 OS=Rattus norvegicus GN... 30 9.5
sp|O07021|YVFW_BACSU Uncharacterized electron transport protein ... 30 9.7
sp|Q2TZH4|SET9_ASPOR Histone-lysine N-methyltransferase set9 OS=... 30 9.7

>sp|Q97T80|ZMPC_STRPN Zinc metalloprotease zmpC OS=Streptococcus
pneumoniae GN=zmpC PE=3 SV=1
Length = 1856

Score = 31.2 bits (69), Expect = 3.3
Identities = 16/34 (47%), Positives = 18/34 (52%)
Frame = -1

Query: 529 SLLEAPNDRAAELVHKHVDKLHGMYLPEQDFTEN 428
SL EAP D A V D+ MYLP + TEN
Sbjct: 621 SLSEAPTDTAKYFVKVKSDRFKEMYLPVKSITEN 654


>sp|Q8GVE3|FLRT_CITMA Flavanone 7-O-glucoside
2''-O-beta-L-rhamnosyltransferase OS=Citrus maxima
GN=C12RT1 PE=1 SV=1
Length = 452

Score = 30.4 bits (67), Expect = 5.6
Identities = 11/37 (29%), Positives = 23/37 (62%)
Frame = +3

Query: 240 MQEELLQLHYHLFFCPSPTTISTSGVGVQLLFCKNIQ 350
+ ++L Q ++H++FC +P + + G V+ F +IQ
Sbjct: 28 LAKKLSQKNFHIYFCSTPNNLQSFGRNVEKNFSSSIQ 64


>sp|Q50863|RFBB_MYXXA O-antigen export system ATP-binding protein
rfbB OS=Myxococcus xanthus GN=rfbB PE=3 SV=1
Length = 437

Score = 30.0 bits (66), Expect = 7.3
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = +3

Query: 138 IRVAQTLLKPELIKWCRGKGQYKGIALISA 227
IR T K EL++W RGK Q + +LI+A
Sbjct: 22 IRGEYTTFKSELLRWLRGKRQSRDASLITA 51


>sp|Q60612|AA1R_MOUSE Adenosine receptor A1 OS=Mus musculus
GN=Adora1 PE=2 SV=3
Length = 326

Score = 30.0 bits (66), Expect = 7.3
Identities = 23/83 (27%), Positives = 36/83 (43%), Gaps = 4/83 (4%)
Frame = -3

Query: 350 LYVLTEKQLHPNSTG*YCCGTWTKE*MIMKLKEFLLHAGSKCRY*GNPLVLSFS----PA 183
L+ L+ LH + C T K +++ + FL H S NP+V +F
Sbjct: 242 LFALSWLPLHILNCITLFCPTCQKPSILIYIAIFLTHGNSAM----NPIVYAFRIHKFRV 297

Query: 182 PLDKLWFEQCLCYPNPTIGQNIP 114
K+W + C P P I ++IP
Sbjct: 298 TFLKIWNDHFRCQPKPPIEEDIP 320


>sp|Q6CVK3|SPT6_KLULA Transcription elongation factor SPT6
OS=Kluyveromyces lactis GN=SPT6 PE=3 SV=1
Length = 1460

Score = 29.6 bits (65), Expect = 9.5
Identities = 21/57 (36%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Frame = +3

Query: 105 EDPRNILANSRIRVAQTL-LKPELIKWCRGKGQYKGIALISAFASSMQEELLQLHYH 272
ED + S R AQ KP L+K+C G+Y L+ +A+ EELL L H
Sbjct: 850 EDEVAVRYQSSERAAQEFPSKPTLVKYCIALGRYIHSPLLE-YANLTNEELLSLSIH 905


>sp|P25099|AA1R_RAT Adenosine receptor A1 OS=Rattus norvegicus
GN=Adora1 PE=2 SV=2
Length = 326

Score = 29.6 bits (65), Expect = 9.5
Identities = 22/83 (26%), Positives = 36/83 (43%), Gaps = 4/83 (4%)
Frame = -3

Query: 350 LYVLTEKQLHPNSTG*YCCGTWTKE*MIMKLKEFLLHAGSKCRY*GNPLVLSFS----PA 183
L+ L+ LH + C T K +++ + FL H S NP+V +F
Sbjct: 242 LFALSWLPLHILNCITLFCPTCQKPSILIYIAIFLTHGNSAM----NPIVYAFRIHKFRV 297

Query: 182 PLDKLWFEQCLCYPNPTIGQNIP 114
K+W + C P P I +++P
Sbjct: 298 TFLKIWNDHFRCQPKPPIDEDLP 320


>sp|O07021|YVFW_BACSU Uncharacterized electron transport protein
yvfW OS=Bacillus subtilis GN=yvfW PE=4 SV=2
Length = 479

Score = 29.6 bits (65), Expect = 9.7
Identities = 19/64 (29%), Positives = 31/64 (48%)
Frame = +2

Query: 77 LEAPIDKVL*GPKEYFGQ**DSGSTDTAQTRAYQVVQGKRTVQGDCLNICICFQHAGGTP 256
LE +D GP+E+ D+G ++ T V+Q R C+N+C ++H GG
Sbjct: 280 LEGEVD----GPEEFHLVIVDNGRSNILGTEFQSVLQCIRCAA--CINVCPVYRHVGGHS 333

Query: 257 SASL 268
S+
Sbjct: 334 YGSI 337


>sp|Q2TZH4|SET9_ASPOR Histone-lysine N-methyltransferase set9
OS=Aspergillus oryzae GN=set9 PE=3 SV=1
Length = 625

Score = 29.6 bits (65), Expect = 9.7
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = -1

Query: 526 LLEAPNDRAAELVHKHVDKLHGMYLPEQDF 437
L + PNDR E +H+ K MYLP+ F
Sbjct: 93 LAKLPNDREKEWFRRHLRKYIQMYLPDSPF 122


tr_hit_id B5SEL5
Definition tr|B5SEL5|B5SEL5_RALSO D-amino acid oxidase flavoprotein OS=Ralstonia solanacearum IPO1609
Align length 61
Score (bit) 35.0
E-value 2.4
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP916582|Adiantum capillus-veneris mRNA, clone:
YMU001_000089_C07.
(535 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|B5SEL5|B5SEL5_RALSO D-amino acid oxidase flavoprotein OS=Rals... 35 2.4
tr|A3RPU8|A3RPU8_RALSO Glycine oxidase OS=Ralstonia solanacearum... 35 2.4
tr|B0RPR8|B0RPR8_XANCB Putative uncharacterized protein OS=Xanth... 35 3.2
tr|A0D714|A0D714_PARTE Chromosome undetermined scaffold_4, whole... 35 3.2
tr|A9DEM5|A9DEM5_9GAMM Sensor protein OS=Shewanella benthica KT9... 33 7.0
tr|A0DJV3|A0DJV3_PARTE Chromosome undetermined scaffold_53, whol... 33 7.2

>tr|B5SEL5|B5SEL5_RALSO D-amino acid oxidase flavoprotein
OS=Ralstonia solanacearum IPO1609 GN=RSIPO_00163 PE=4
SV=1
Length = 345

Score = 35.0 bits (79), Expect = 2.4
Identities = 19/61 (31%), Positives = 35/61 (57%), Gaps = 2/61 (3%)
Frame = +3

Query: 189 GKGQYKGIALISAFASSMQEELLQLHYHLFFC-PSPTTISTSGVGVQL-LFCKNIQAAPY 362
G+GQ AL+ A A+ ++ +QLH++ P P ++ +G+G +L L C+ + A P
Sbjct: 122 GEGQLDNRALLDALATELEALGVQLHWNTAIADPRPDALAAAGLGARLVLDCRGLGAKPQ 181

Query: 363 Y 365
+
Sbjct: 182 W 182


>tr|A3RPU8|A3RPU8_RALSO Glycine oxidase OS=Ralstonia solanacearum
UW551 GN=RRSL_04360 PE=4 SV=1
Length = 379

Score = 35.0 bits (79), Expect = 2.4
Identities = 19/61 (31%), Positives = 35/61 (57%), Gaps = 2/61 (3%)
Frame = +3

Query: 189 GKGQYKGIALISAFASSMQEELLQLHYHLFFC-PSPTTISTSGVGVQL-LFCKNIQAAPY 362
G+GQ AL+ A A+ ++ +QLH++ P P ++ +G+G +L L C+ + A P
Sbjct: 156 GEGQLDNRALLDALATELEALGVQLHWNTAIADPRPDALAAAGLGARLVLDCRGLGAKPQ 215

Query: 363 Y 365
+
Sbjct: 216 W 216


>tr|B0RPR8|B0RPR8_XANCB Putative uncharacterized protein
OS=Xanthomonas campestris pv. campestris (strain B100)
GN=xcc-b100_1105 PE=4 SV=1
Length = 168

Score = 34.7 bits (78), Expect = 3.2
Identities = 22/69 (31%), Positives = 30/69 (43%), Gaps = 7/69 (10%)
Frame = -3

Query: 293 GTWTKE*MIMKLKEFLLHAGSKCRY*GNPLVLSFSPAPLDKLWFEQCLCYPNPTIGQ--- 123
G W +E + EF LHA + Y V +F PL WFEQ C + G+
Sbjct: 87 GAWLREHLGAVRFEFALHADAAALYWQARRVWAFGWLPLPARWFEQVRCREHADEGRYGF 146

Query: 122 ----NIPWV 108
++PWV
Sbjct: 147 LVDVHLPWV 155


>tr|A0D714|A0D714_PARTE Chromosome undetermined scaffold_4, whole
genome shotgun sequence OS=Paramecium tetraurelia
GN=GSPATT00001872001 PE=4 SV=1
Length = 352

Score = 34.7 bits (78), Expect = 3.2
Identities = 18/50 (36%), Positives = 29/50 (58%), Gaps = 4/50 (8%)
Frame = -2

Query: 402 LPKFCEQQLLLVYNRVLLVCSYRK----ATAPQLHWLILLWDLDKRINDN 265
L FCEQ L Y+R++ + ++R+ A L+WL+L + D I+DN
Sbjct: 6 LRNFCEQMRALGYHRIISMENFRRPNFELVADILYWLVLKYQPDADISDN 55


>tr|A9DEM5|A9DEM5_9GAMM Sensor protein OS=Shewanella benthica KT99
GN=KT99_13902 PE=4 SV=1
Length = 1140

Score = 33.5 bits (75), Expect = 7.0
Identities = 26/116 (22%), Positives = 47/116 (40%)
Frame = +3

Query: 114 RNILANSRIRVAQTLLKPELIKWCRGKGQYKGIALISAFASSMQEELLQLHYHLFFCPSP 293
R +L N + ++ CR +G+Y I ++ + E+ ++ +P
Sbjct: 896 RRVLQNFLTNAYRYAKGNRVLLGCRHRGEYLEIQVLDTGCGIDESEISEIFKEFKRLDNP 955

Query: 294 TTISTSGVGVQLLFCKNIQAAPYYRRGATAAHKILVE*VDGPSIRFSVKSCSGRYI 461
T+ S SG+G+ L I G H+I V+ + G FS+ G+ I
Sbjct: 956 TSKSVSGLGLGLAIADRI--------GRVLEHEIKVDSILGQGSVFSISVPMGKII 1003


>tr|A0DJV3|A0DJV3_PARTE Chromosome undetermined scaffold_53, whole
genome shotgun sequence OS=Paramecium tetraurelia
GN=GSPATT00017664001 PE=4 SV=1
Length = 396

Score = 33.5 bits (75), Expect = 7.2
Identities = 18/50 (36%), Positives = 29/50 (58%), Gaps = 4/50 (8%)
Frame = -2

Query: 402 LPKFCEQQLLLVYNRVLLVCSYRK----ATAPQLHWLILLWDLDKRINDN 265
L FCEQ L Y+R++ + ++R+ A L+WL L +D + I+DN
Sbjct: 6 LRNFCEQMRALGYHRIISMENFRRPNFELVADILYWLALKYDPNTDISDN 55