BP916585 |
Clone id |
YMU001_000089_C10 |
Library |
YMU01 |
Length |
494 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000089_C10. |
Accession |
BP916585 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
GTACAAGAATGTAATGGGTATCGGGTTTAACATTTGCTTCTCTCATGTTCCAATACATGG CAAGAGTTTCTTCACTCTCTCCACCTTGAATGAGCATATATATCATCAAATTCCATGTGA AGATGGTAGGTTTGACGACATGAGCAAAGACGCTGTAAGCATCCTGCAGACGAAAAGGAG GCAGCCTGAATGCTCATATGCATAAGAGCTTCTCTATCTGTGATGCAGAACAGAAAACTC TGGGCGGCCAAAACGTAGACGTTGATTGACAACATCGCTGTTAGCATCATCGGAGAGCTC TCTCTACTCCTTGCATACCATCGCCATCACTCTGTCCTATGACGTTAAAAGTTCTTCTCT CAGTTCTTGAGTTTAAGACTCGTTGGACACGACAGCAAAAATTGTTTTCACTTCTTCTTC TTCTTCTTCTTCTTCTGTAGTATGAGGACGTCACTGAATGCAGACCCTCTCTAGCGTGCA AATTAGGAGATGCC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9SMZ2 |
Definition |
sp|Q9SMZ2|PP347_ARATH Pentatricopeptide repeat-containing protein At4g33170 OS=Arabidopsis thaliana |
Align length |
50 |
Score (bit) |
44.3 |
E-value |
0.0003 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A7QLC1 |
Definition |
tr|A7QLC1|A7QLC1_VITVI Chromosome chr11 scaffold_118, whole genome shotgun sequence OS=Vitis vinifera |
Align length |
50 |
Score (bit) |
43.9 |
E-value |
0.004 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP916585|Adiantum capillus-veneris mRNA, clone: YMU001_000089_C10. (494 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A7QLC1|A7QLC1_VITVI Chromosome chr11 scaffold_118, whole geno... 44 0.004 tr|A9PIF9|A9PIF9_POPTR Putative uncharacterized protein OS=Popul... 43 0.007 tr|Q5W964|Q5W964_PHYPA PPR986-12 OS=Physcomitrella patens PE=2 SV=1 42 0.012 tr|Q0DZE7|Q0DZE7_ORYSJ Os02g0625100 protein OS=Oryza sativa subs... 42 0.012 tr|A9TNX6|A9TNX6_PHYPA Predicted protein OS=Physcomitrella paten... 42 0.012 tr|A7NYH7|A7NYH7_VITVI Chromosome chr6 scaffold_3, whole genome ... 42 0.012 tr|A3A980|A3A980_ORYSJ Putative uncharacterized protein OS=Oryza... 42 0.012 tr|A2X7E7|A2X7E7_ORYSI Putative uncharacterized protein OS=Oryza... 42 0.012 tr|A9P0W0|A9P0W0_PICSI Putative uncharacterized protein OS=Picea... 42 0.016 tr|A7QI67|A7QI67_VITVI Chromosome chr17 scaffold_101, whole geno... 42 0.016 tr|A7PEW9|A7PEW9_VITVI Chromosome chr11 scaffold_13, whole genom... 42 0.021 tr|A7PEJ0|A7PEJ0_VITVI Chromosome chr11 scaffold_13, whole genom... 41 0.027 tr|A5BGJ8|A5BGJ8_VITVI Putative uncharacterized protein OS=Vitis... 41 0.027 tr|A7P2J6|A7P2J6_VITVI Chromosome chr1 scaffold_5, whole genome ... 41 0.035 tr|A5BUK5|A5BUK5_VITVI Putative uncharacterized protein OS=Vitis... 41 0.035 tr|A5AY99|A5AY99_VITVI Putative uncharacterized protein OS=Vitis... 41 0.035 tr|Q6K8H8|Q6K8H8_ORYSJ Os02g0468800 protein OS=Oryza sativa subs... 40 0.046 tr|B8AHJ1|B8AHJ1_ORYSI Putative uncharacterized protein OS=Oryza... 40 0.046 tr|A7Q1A2|A7Q1A2_VITVI Chromosome chr10 scaffold_43, whole genom... 40 0.046 tr|A7P8S8|A7P8S8_VITVI Chromosome chr3 scaffold_8, whole genome ... 40 0.046 tr|A9T480|A9T480_PHYPA Predicted protein (Fragment) OS=Physcomit... 40 0.060 tr|A7QI90|A7QI90_VITVI Chromosome chr17 scaffold_101, whole geno... 40 0.060 tr|A7R0F5|A7R0F5_VITVI Chromosome undetermined scaffold_306, who... 40 0.078 tr|A7PQZ4|A7PQZ4_VITVI Chromosome chr6 scaffold_25, whole genome... 40 0.078 tr|A7PHH0|A7PHH0_VITVI Chromosome chr17 scaffold_16, whole genom... 40 0.078 tr|A5BMC7|A5BMC7_VITVI Putative uncharacterized protein OS=Vitis... 40 0.078 tr|A5AH74|A5AH74_VITVI Putative uncharacterized protein OS=Vitis... 40 0.078 tr|A3B2H6|A3B2H6_ORYSJ Putative uncharacterized protein OS=Oryza... 39 0.10 tr|A2Y335|A2Y335_ORYSI Putative uncharacterized protein OS=Oryza... 39 0.10 tr|A7PRQ2|A7PRQ2_VITVI Chromosome chr14 scaffold_27, whole genom... 39 0.13
>tr|A7QLC1|A7QLC1_VITVI Chromosome chr11 scaffold_118, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00001532001 PE=4 SV=1 Length = 618
Score = 43.9 bits (102), Expect = 0.004 Identities = 21/50 (42%), Positives = 28/50 (56%) Frame = -2
Query: 169 LQDAYSVFAHVVKPTIFTWNLMIYMLIQGGESEETLAMYWNMREANVKPD 20 L A VF +VK + TWN MI Q G S+E + ++ MRE+ V PD Sbjct: 278 LSSARRVFDRMVKKDVVTWNAMITGYAQNGVSDEAIILFSGMRESGVNPD 327
>tr|A9PIF9|A9PIF9_POPTR Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1 Length = 553
Score = 43.1 bits (100), Expect = 0.007 Identities = 20/48 (41%), Positives = 28/48 (58%) Frame = -2
Query: 160 AYSVFAHVVKPTIFTWNLMIYMLIQGGESEETLAMYWNMREANVKPDT 17 AYSVF + +P + TW+ +I Q GE E+ L Y N+ A KPD+ Sbjct: 260 AYSVFRSLCQPDLVTWSALITGFSQAGEHEKALLFYKNLNLAGKKPDS 307
>tr|Q5W964|Q5W964_PHYPA PPR986-12 OS=Physcomitrella patens PE=2 SV=1 Length = 986
Score = 42.4 bits (98), Expect = 0.012 Identities = 17/50 (34%), Positives = 30/50 (60%) Frame = -2
Query: 169 LQDAYSVFAHVVKPTIFTWNLMIYMLIQGGESEETLAMYWNMREANVKPD 20 ++DA+ VF + K +++W MI Q G +E L +++ M++ VKPD Sbjct: 666 IEDAHQVFHKLPKKNVYSWTSMIAGYAQHGRGKEALELFYQMQQEGVKPD 715
Score = 35.8 bits (81), Expect = 1.1 Identities = 15/51 (29%), Positives = 28/51 (54%) Frame = -2
Query: 169 LQDAYSVFAHVVKPTIFTWNLMIYMLIQGGESEETLAMYWNMREANVKPDT 17 L+DA+ VF + K + WN MI +Q + + LA + + + +KP++ Sbjct: 464 LKDAHRVFEKISKQNVVAWNAMITAYVQHEQYDNALATFQALLKEGIKPNS 514
>tr|Q0DZE7|Q0DZE7_ORYSJ Os02g0625100 protein OS=Oryza sativa subsp. japonica GN=Os02g0625100 PE=4 SV=1 Length = 465
Score = 42.4 bits (98), Expect = 0.012 Identities = 18/50 (36%), Positives = 30/50 (60%) Frame = -2
Query: 169 LQDAYSVFAHVVKPTIFTWNLMIYMLIQGGESEETLAMYWNMREANVKPD 20 ++DA VFA + I++WN MI L G + L+++W M+ A V+P+ Sbjct: 288 IRDAVRVFAAMPVRNIYSWNSMIAGLAMNGSERQALSLFWKMQLAGVRPN 337
>tr|A9TNX6|A9TNX6_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_224041 PE=4 SV=1 Length = 986
Score = 42.4 bits (98), Expect = 0.012 Identities = 17/50 (34%), Positives = 30/50 (60%) Frame = -2
Query: 169 LQDAYSVFAHVVKPTIFTWNLMIYMLIQGGESEETLAMYWNMREANVKPD 20 ++DA+ VF + K +++W MI Q G +E L +++ M++ VKPD Sbjct: 666 IEDAHQVFHKLPKKNVYSWTSMITGYAQHGRGKEALELFYQMQQEGVKPD 715
Score = 35.8 bits (81), Expect = 1.1 Identities = 15/51 (29%), Positives = 28/51 (54%) Frame = -2
Query: 169 LQDAYSVFAHVVKPTIFTWNLMIYMLIQGGESEETLAMYWNMREANVKPDT 17 L+DA+ VF + K + WN MI +Q + + LA + + + +KP++ Sbjct: 464 LKDAHRVFEKISKQNVVAWNAMITAYVQHEQYDNALATFQALLKEGIKPNS 514
>tr|A7NYH7|A7NYH7_VITVI Chromosome chr6 scaffold_3, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00024125001 PE=4 SV=1 Length = 712
Score = 42.4 bits (98), Expect = 0.012 Identities = 18/46 (39%), Positives = 27/46 (58%) Frame = -2
Query: 157 YSVFAHVVKPTIFTWNLMIYMLIQGGESEETLAMYWNMREANVKPD 20 Y VF ++ + + +WN MI +QGG EE L ++ M NVKP+ Sbjct: 191 YRVFVNIPRRDVVSWNSMITAFVQGGCPEEALELFQEMETQNVKPN 236
Score = 38.1 bits (87), Expect = 0.23 Identities = 18/50 (36%), Positives = 28/50 (56%) Frame = -2
Query: 169 LQDAYSVFAHVVKPTIFTWNLMIYMLIQGGESEETLAMYWNMREANVKPD 20 LQ A VF V + +F W+ MI L G ++ +A++ M+E VKP+ Sbjct: 390 LQKALMVFHSVERKDVFVWSAMIAGLAMHGHGKDAIALFSKMQEDKVKPN 439
>tr|A3A980|A3A980_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_007352 PE=4 SV=1 Length = 493
Score = 42.4 bits (98), Expect = 0.012 Identities = 18/50 (36%), Positives = 30/50 (60%) Frame = -2
Query: 169 LQDAYSVFAHVVKPTIFTWNLMIYMLIQGGESEETLAMYWNMREANVKPD 20 ++DA VFA + I++WN MI L G + L+++W M+ A V+P+ Sbjct: 288 IRDAVRVFAAMPVRNIYSWNSMIAGLAMNGSERQALSLFWKMQLAGVRPN 337
>tr|A2X7E7|A2X7E7_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_08137 PE=4 SV=1 Length = 493
Score = 42.4 bits (98), Expect = 0.012 Identities = 18/50 (36%), Positives = 30/50 (60%) Frame = -2
Query: 169 LQDAYSVFAHVVKPTIFTWNLMIYMLIQGGESEETLAMYWNMREANVKPD 20 ++DA VFA + I++WN MI L G + L+++W M+ A V+P+ Sbjct: 288 IRDAVRVFAAMPVRNIYSWNSMIAGLAMNGSERQALSLFWKMQLAGVRPN 337
>tr|A9P0W0|A9P0W0_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 370
Score = 42.0 bits (97), Expect = 0.016 Identities = 18/51 (35%), Positives = 32/51 (62%) Frame = -2
Query: 172 RLQDAYSVFAHVVKPTIFTWNLMIYMLIQGGESEETLAMYWNMREANVKPD 20 R++DA VF+ +++P + +WN MI L Q G +E + ++ M + VKP+ Sbjct: 48 RIEDAQEVFSKLLEPDVASWNAMISGLAQHGCGKEAVLLFEQMLQTGVKPN 98
>tr|A7QI67|A7QI67_VITVI Chromosome chr17 scaffold_101, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00000114001 PE=4 SV=1 Length = 633
Score = 42.0 bits (97), Expect = 0.016 Identities = 18/50 (36%), Positives = 28/50 (56%) Frame = -2
Query: 169 LQDAYSVFAHVVKPTIFTWNLMIYMLIQGGESEETLAMYWNMREANVKPD 20 + D VF H+ + + TW+ MI Q G S E L ++ NM+ A +KP+ Sbjct: 279 VDDGRLVFDHMARRDVVTWSAMIAGYAQNGRSNEALELFENMKSAQIKPN 328
Score = 33.9 bits (76), Expect = 4.3 Identities = 17/47 (36%), Positives = 26/47 (55%) Frame = -2
Query: 160 AYSVFAHVVKPTIFTWNLMIYMLIQGGESEETLAMYWNMREANVKPD 20 A +F + + TWN MI L G +E+ +A+Y M+E VKP+ Sbjct: 383 ARQIFDKLPQRDNVTWNSMIMGLAINGFAEDAIALYNRMKEIEVKPN 429
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