BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP916586|Adiantum capillus-veneris mRNA, clone:
YMU001_000089_C11.
         (528 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P30938|SSR5_RAT Somatostatin receptor type 5 OS=Rattus norveg...    30   7.1  
sp|P40547|VID28_YEAST Vacuolar import and degradation protein 28...    30   9.2  
sp|P51517|POL_SRV2 Pol polyprotein OS=Simian retrovirus SRV-2 GN...    30   9.2  

>sp|P30938|SSR5_RAT Somatostatin receptor type 5 OS=Rattus
           norvegicus GN=Sstr5 PE=2 SV=2
          Length = 363

 Score = 30.0 bits (66), Expect = 7.1
 Identities = 11/29 (37%), Positives = 19/29 (65%)
 Frame = -2

Query: 176 VSSERPRQYEPKNTKAKTSILMLYRGCWI 90
           V S R R+ EPK T+    +++++ GCW+
Sbjct: 234 VGSSRRRRSEPKVTRMVVVVVLVFVGCWL 262


>sp|P40547|VID28_YEAST Vacuolar import and degradation protein 28
           OS=Saccharomyces cerevisiae GN=VID28 PE=1 SV=1
          Length = 921

 Score = 29.6 bits (65), Expect = 9.2
 Identities = 14/44 (31%), Positives = 27/44 (61%)
 Frame = +2

Query: 80  RVNVSNILDKASISKF*LLYF*VHIVVAFQRKHRSEFS*KLWYL 211
           ++N+SN+ D + +S   LLY   H ++   RK R++ + K++ L
Sbjct: 249 KINISNMYDSSLLSLALLLYLRYHYMIPGDRKLRNDATFKMFVL 292


>sp|P51517|POL_SRV2 Pol polyprotein OS=Simian retrovirus SRV-2
           GN=pol PE=3 SV=1
          Length = 867

 Score = 29.6 bits (65), Expect = 9.2
 Identities = 21/85 (24%), Positives = 32/85 (37%), Gaps = 5/85 (5%)
 Frame = +3

Query: 21  YVPKGQLTILACHITIKAMLE*M-----YPTSSIKHQYRSFSFCIFRFILSWPFRGNIGQ 185
           Y P+GQ  +   H+++K  LE +     YPT        + +  I  F+       +   
Sbjct: 741 YNPQGQGIVERAHLSLKNTLEKIKKGEWYPTQGSPRNILNHALFILNFLNLDAQNKSAAD 800

Query: 186 NFPRNSGTSLYTMTKQSKQDDISWH 260
            F   S    Y M K     D +WH
Sbjct: 801 RFWHTSSKKEYAMVKWKDPLDNTWH 825

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP916586|Adiantum capillus-veneris mRNA, clone:
YMU001_000089_C11.
         (528 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B3NH13|B3NH13_DROER GG13883 OS=Drosophila erecta GN=GG13883 P...    33   8.8  

>tr|B3NH13|B3NH13_DROER GG13883 OS=Drosophila erecta GN=GG13883 PE=4
           SV=1
          Length = 358

 Score = 33.1 bits (74), Expect = 8.8
 Identities = 14/36 (38%), Positives = 19/36 (52%)
 Frame = +3

Query: 165 FRGNIGQNFPRNSGTSLYTMTKQSKQDDISWHSGSQ 272
           F G++ + F RN+G SL     Q  +D   WH G Q
Sbjct: 216 FGGDVVEEFTRNNGISLICRAHQLARDGFRWHFGQQ 251