| BP916588 |
| Clone id |
YMU001_000089_D01 |
| Library |
YMU01 |
| Length |
389 |
| Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000089_D01. |
| Accession |
BP916588 |
| Tissue type |
prothallium |
| Developmental stage |
- |
| Contig ID |
CL1085Contig1 |
| Sequence |
GCCGCATGTAATCATCAAGAACATCCATAAGGCTCACCTTCCCAGCTCTCAAATTAATCT GTGTAATGACAAGTACTCTCTTATTAGAGGACTTTGCCTCCCCTAACATCATGTCTAGTA GCTTCAGCTTTCCACTTGCTCCTATTCCAAAATCAAGCAGCTCCTTTGCAGATAGATATG TTAAAGACTCTTGAAATCCTGGTTTGACCAGAAAAGGATGGTTGCAGCACTCACGAAGTT TCAGAAGAAGTTCTTGTGGAGATGACGCAATATCACCACGCTTACCACGGACAAGAGAGT CACATTTCTCTATCAGCAACGTACAATATTGCTGCAGCTGAAATGCTGTCATTTTGACAG GCACCCAAAATTCCATGGGACTAGAAGAC |
| ■■Homology search results ■■ |
- |
| Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
| sp_hit_id |
O97159 |
| Definition |
sp|O97159|CHDM_DROME Chromodomain-helicase-DNA-binding protein Mi-2 homolog OS=Drosophila melanogaster |
| Align length |
126 |
| Score (bit) |
65.5 |
| E-value |
8.0e-11 |
| Report |
 |
| TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
| tr_hit_id |
A7NZL8 |
| Definition |
tr|A7NZL8|A7NZL8_VITVI Chromosome chr6 scaffold_3, whole genome shotgun sequence OS=Vitis vinifera |
| Align length |
130 |
| Score (bit) |
101.0 |
| E-value |
2.0e-20 |
| Report |
 BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP916588|Adiantum capillus-veneris mRNA, clone: YMU001_000089_D01. (389 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A7NZL8|A7NZL8_VITVI Chromosome chr6 scaffold_3, whole genome ... 101 2e-20 tr|B8AGJ8|B8AGJ8_ORYSI Putative uncharacterized protein OS=Oryza... 81 2e-14 tr|A3A2C4|A3A2C4_ORYSJ Putative uncharacterized protein OS=Oryza... 81 2e-14 tr|Q9M659|Q9M659_ARATH MOM OS=Arabidopsis thaliana PE=2 SV=1 76 1e-12 tr|Q9M658|Q9M658_ARATH MOM OS=Arabidopsis thaliana GN=At1g08060 ... 76 1e-12 tr|A5B3Q2|A5B3Q2_VITVI Putative uncharacterized protein OS=Vitis... 75 2e-12 tr|Q9LN02|Q9LN02_ARATH T6D22.14 OS=Arabidopsis thaliana PE=4 SV=1 73 8e-12 tr|B5YP65|B5YP65_THAPS Predicted protein OS=Thalassiosira pseudo... 73 8e-12 tr|B4M9B0|B4M9B0_DROVI GJ18281 OS=Drosophila virilis GN=GJ18281 ... 72 1e-11 tr|Q8SWV9|Q8SWV9_DROME LD39323p (Fragment) OS=Drosophila melanog... 72 1e-11 tr|Q7KU24|Q7KU24_DROME Chromodomain-helicase-DNA-binding protein... 72 1e-11 tr|Q6NP59|Q6NP59_DROME SD21488p (Fragment) OS=Drosophila melanog... 72 1e-11 tr|Q24376|Q24376_DROME Chromodomain-helicase-DNA-binding protein... 72 1e-11 tr|B4NXB6|B4NXB6_DROYA GE14968 OS=Drosophila yakuba GN=GE14968 P... 72 1e-11 tr|B4MX23|B4MX23_DROWI GK15574 OS=Drosophila willistoni GN=GK155... 72 1e-11 tr|B4KHL3|B4KHL3_DROMO GI10771 OS=Drosophila mojavensis GN=GI107... 72 1e-11 tr|B4JCS5|B4JCS5_DROGR GH10643 OS=Drosophila grimshawi GN=GH1064... 72 1e-11 tr|B3NAN6|B3NAN6_DROER GG24470 OS=Drosophila erecta GN=GG24470 P... 72 1e-11 tr|B3MMA3|B3MMA3_DROAN GF14337 OS=Drosophila ananassae GN=GF1433... 72 1e-11 tr|Q29KH0|Q29KH0_DROPS GA17649 OS=Drosophila pseudoobscura pseud... 71 3e-11 tr|B4GSA0|B4GSA0_DROPE GL26702 OS=Drosophila persimilis GN=GL267... 71 3e-11 tr|Q54UZ8|Q54UZ8_DICDI Myb domain-containing protein OS=Dictyost... 69 9e-11 tr|B4ML97|B4ML97_DROWI GK17504 OS=Drosophila willistoni GN=GK175... 69 2e-10 tr|A9X4T1|A9X4T1_BOMMO CHD1 OS=Bombyx mori GN=CHD1 PE=2 SV=1 68 3e-10 tr|A2FI37|A2FI37_TRIVA SNF2 family N-terminal domain containing ... 67 3e-10 tr|B8B194|B8B194_ORYSI Putative uncharacterized protein OS=Oryza... 67 4e-10 tr|A3B7I8|A3B7I8_ORYSJ Putative uncharacterized protein OS=Oryza... 67 4e-10 tr|Q4SS19|Q4SS19_TETNG Chromosome undetermined SCAF14482, whole ... 67 6e-10 tr|B4PFW6|B4PFW6_DROYA GE22457 OS=Drosophila yakuba GN=Dyak\GE22... 67 6e-10 tr|B5DQA0|B5DQA0_DROPS GA23929 OS=Drosophila pseudoobscura pseud... 66 8e-10
>tr|A7NZL8|A7NZL8_VITVI Chromosome chr6 scaffold_3, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00024563001 PE=4 SV=1 Length = 628
Score = 101 bits (252), Expect = 2e-20 Identities = 53/130 (40%), Positives = 81/130 (62%), Gaps = 1/130 (0%) Frame = -2
Query: 388 SSSPMEFWVPVKMTAFQLQQYCTLLIEKCDSLVRGKRGDIASSPQELLLKLRECCNHPFL 209 SS +E+WVP+ ++ QL+QYC L+ SL + D + +++L+ R+CC+HP++ Sbjct: 77 SSRFVEYWVPIPLSNVQLEQYCGTLLSNTISLCSCSKNDPVGALRDVLISTRKCCDHPYI 136
Query: 208 VKPGFQESLTY-LSAKELLDFGIGASGKLKLLDMMLGEAKSSNKRVLVITQINLRAGKVS 32 V Q LT L E LD GI ASGKL+LLD M+ E K+ RVL++ Q +G+ S Sbjct: 137 VDLSLQSFLTKGLPEIEYLDVGINASGKLQLLDRMISEIKNRGLRVLILFQSIGGSGRDS 196
Query: 31 LMDVLDDYMR 2 + D+LDD++R Sbjct: 197 IGDILDDFLR 206
>tr|B8AGJ8|B8AGJ8_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_05543 PE=4 SV=1 Length = 2670
Score = 81.3 bits (199), Expect = 2e-14 Identities = 46/129 (35%), Positives = 76/129 (58%), Gaps = 1/129 (0%) Frame = -2
Query: 388 SSSPMEFWVPVKMTAFQLQQYCTLLIEKCDSLVRGKRGDIASSPQELLLKLRECCNHPFL 209 SS +E+WVP ++ QL+ YC++L+ K L D + ++ L L++CC+HP++ Sbjct: 757 SSKFLEYWVPSCISQPQLEMYCSILLSKSSVLRSEMETDSVGALHDIYLSLKKCCDHPYI 816
Query: 208 VKPGFQESLTYLS-AKELLDFGIGASGKLKLLDMMLGEAKSSNKRVLVITQINLRAGKVS 32 V + SL+ S E +D + ASGKL +LD ML E K + RV+++ Q + RAG Sbjct: 817 VNEFLRSSLSNNSNVTENIDTVVHASGKLLVLDKMLNEIKKKSLRVILLFQSD-RAGGNK 875
Query: 31 LMDVLDDYM 5 + ++L+D M Sbjct: 876 MGNILEDLM 884
>tr|A3A2C4|A3A2C4_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_004946 PE=4 SV=1 Length = 2604
Score = 81.3 bits (199), Expect = 2e-14 Identities = 46/129 (35%), Positives = 76/129 (58%), Gaps = 1/129 (0%) Frame = -2
Query: 388 SSSPMEFWVPVKMTAFQLQQYCTLLIEKCDSLVRGKRGDIASSPQELLLKLRECCNHPFL 209 SS +E+WVP ++ QL+ YC++L+ K L D + ++ L L++CC+HP++ Sbjct: 699 SSKFLEYWVPSCISQPQLEMYCSILLSKSSVLRSEMETDSVGALHDIYLSLKKCCDHPYI 758
Query: 208 VKPGFQESLTYLS-AKELLDFGIGASGKLKLLDMMLGEAKSSNKRVLVITQINLRAGKVS 32 V + SL+ S E +D + ASGKL +LD ML E K + RV+++ Q + RAG Sbjct: 759 VNEFLRSSLSNNSNVTENIDTVVHASGKLLVLDKMLNEIKKKSLRVILLFQSD-RAGGNK 817
Query: 31 LMDVLDDYM 5 + ++L+D M Sbjct: 818 MGNILEDLM 826
>tr|Q9M659|Q9M659_ARATH MOM OS=Arabidopsis thaliana PE=2 SV=1 Length = 2001
Score = 75.9 bits (185), Expect = 1e-12 Identities = 46/129 (35%), Positives = 73/129 (56%), Gaps = 1/129 (0%) Frame = -2
Query: 388 SSSPMEFWVPVKMTAFQLQQYCTLLIEKCDSLVRGKRGDIASSPQELLLKLRECCNHPFL 209 SS E+WVPV+++ QL+QYC L K SL + D+ + +E L +R+ C+HP++ Sbjct: 474 SSVYPEYWVPVQLSDVQLEQYCQTLFSKSLSLSSLSKIDLGAL-EETLNSVRKTCDHPYV 532
Query: 208 VKPGFQESLTY-LSAKELLDFGIGASGKLKLLDMMLGEAKSSNKRVLVITQINLRAGKVS 32 + ++ LT L E+LD I ASGKL LLD ML K + + +V Q + Sbjct: 533 MDASLKQLLTKNLELHEILDVEIKASGKLHLLDKMLTHIKKNGLKAVVFYQATQTPEGLL 592
Query: 31 LMDVLDDYM 5 L ++L+D++ Sbjct: 593 LGNILEDFV 601
>tr|Q9M658|Q9M658_ARATH MOM OS=Arabidopsis thaliana GN=At1g08060 PE=4 SV=1 Length = 2001
Score = 75.9 bits (185), Expect = 1e-12 Identities = 46/129 (35%), Positives = 73/129 (56%), Gaps = 1/129 (0%) Frame = -2
Query: 388 SSSPMEFWVPVKMTAFQLQQYCTLLIEKCDSLVRGKRGDIASSPQELLLKLRECCNHPFL 209 SS E+WVPV+++ QL+QYC L K SL + D+ + +E L +R+ C+HP++ Sbjct: 474 SSVYPEYWVPVQLSDVQLEQYCQTLFSKSLSLSSLSKIDLGAL-EETLNSVRKTCDHPYV 532
Query: 208 VKPGFQESLTY-LSAKELLDFGIGASGKLKLLDMMLGEAKSSNKRVLVITQINLRAGKVS 32 + ++ LT L E+LD I ASGKL LLD ML K + + +V Q + Sbjct: 533 MDASLKQLLTKNLELHEILDVEIKASGKLHLLDKMLTHIKKNGLKAVVFYQATQTPEGLL 592
Query: 31 LMDVLDDYM 5 L ++L+D++ Sbjct: 593 LGNILEDFV 601
>tr|A5B3Q2|A5B3Q2_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_044023 PE=4 SV=1 Length = 431
Score = 74.7 bits (182), Expect = 2e-12 Identities = 40/100 (40%), Positives = 59/100 (59%), Gaps = 1/100 (1%) Frame = -2
Query: 388 SSSPMEFWVPVKMTAFQLQQYCTLLIEKCDSLVRGKRGDIASSPQELLLKLRECCNHPFL 209 SS +E+WVP+ ++ QL+QY L+ SL + D + +++L+ +CC+HPF+ Sbjct: 86 SSRFVEYWVPIPLSNVQLEQYRGTLLSNTTSLCSCSKNDPVGALRDVLISTPKCCDHPFI 145
Query: 208 VKPGFQESLTY-LSAKELLDFGIGASGKLKLLDMMLGEAK 92 V Q LT L E LD GI A+GKL+LLD M+ E K Sbjct: 146 VDLSLQSFLTKGLPEIEYLDVGIDATGKLQLLDRMISEIK 185
>tr|Q9LN02|Q9LN02_ARATH T6D22.14 OS=Arabidopsis thaliana PE=4 SV=1 Length = 2254
Score = 72.8 bits (177), Expect = 8e-12 Identities = 46/130 (35%), Positives = 75/130 (57%), Gaps = 2/130 (1%) Frame = -2
Query: 388 SSSPMEFWVPVKMTAFQLQQYCTLLIEKCDSLVRGKRGDIASSPQELLLKLRECCNHPFL 209 SS E+WVPV+++ QL+QYC L K SL + D+ + +E L +R+ C+HP++ Sbjct: 706 SSVYPEYWVPVQLSDVQLEQYCQTLFSKSLSLSSLSKIDLGAL-EETLNSVRKTCDHPYV 764
Query: 208 VKPGFQESLT-YLSAKELLDFGIGASGKLKLLDMMLGEAKSSNKRVLVITQINLRAGKVS 32 + ++ LT L E+LD I ASGKL LLD ML K + + +V Q + + Sbjct: 765 MDASLKQLLTKNLELHEILDVEIKASGKLHLLDKMLTHIKKNGLKAVVFYQQATQTPEGL 824
Query: 31 LM-DVLDDYM 5 L+ ++L+D++ Sbjct: 825 LLGNILEDFV 834
>tr|B5YP65|B5YP65_THAPS Predicted protein OS=Thalassiosira pseudonana CCMP1335 GN=THAPS_35501 PE=4 SV=1 Length = 338
Score = 72.8 bits (177), Expect = 8e-12 Identities = 42/123 (34%), Positives = 66/123 (53%) Frame = -2
Query: 373 EFWVPVKMTAFQLQQYCTLLIEKCDSLVRGKRGDIASSPQELLLKLRECCNHPFLVKPGF 194 E + V++T Q Q Y L + L RGK+ S L ++LR+CCNHPFL+ Sbjct: 121 ETLIEVELTVLQKQYYRALYEKNLKFLHRGKKPLDGPSINNLAMQLRKCCNHPFLLTGVE 180
Query: 193 QESLTYLSAKELLDFGIGASGKLKLLDMMLGEAKSSNKRVLVITQINLRAGKVSLMDVLD 14 E KE++D + ASGKL LLD +L K+ R+L+ +Q + ++D+++ Sbjct: 181 SEVRLQQPNKEIVDLMVEASGKLVLLDKLLPRLKADGHRILLFSQFKI------MLDLIE 234
Query: 13 DYM 5 DY+ Sbjct: 235 DYL 237
>tr|B4M9B0|B4M9B0_DROVI GJ18281 OS=Drosophila virilis GN=GJ18281 PE=4 SV=1 Length = 1924
Score = 72.4 bits (176), Expect = 1e-11 Identities = 45/119 (37%), Positives = 70/119 (58%) Frame = -2
Query: 358 VKMTAFQLQQYCTLLIEKCDSLVRGKRGDIASSPQELLLKLRECCNHPFLVKPGFQESLT 179 V+MT+ Q Q Y +L + D+L +GKRG S+ ++++L++CCNH L++P E L Sbjct: 788 VEMTSLQKQYYKWILTKNFDALRKGKRGS-TSTFLNIVIELKKCCNHAALIRPSEFE-LF 845
Query: 178 YLSAKELLDFGIGASGKLKLLDMMLGEAKSSNKRVLVITQINLRAGKVSLMDVLDDYMR 2 L E L + SGKL LLD +L K + RVL+ +Q+ V ++DVL DY++ Sbjct: 846 GLQQDEALQMLLKGSGKLVLLDKLLCRLKETGHRVLIFSQM------VRMLDVLADYLQ 898
>tr|Q8SWV9|Q8SWV9_DROME LD39323p (Fragment) OS=Drosophila melanogaster GN=Chd1 PE=2 SV=1 Length = 1101
Score = 72.0 bits (175), Expect = 1e-11 Identities = 44/119 (36%), Positives = 70/119 (58%) Frame = -2
Query: 358 VKMTAFQLQQYCTLLIEKCDSLVRGKRGDIASSPQELLLKLRECCNHPFLVKPGFQESLT 179 V+MT+ Q Q Y +L + D+L +GKRG S+ ++++L++CCNH L++P + L Sbjct: 231 VEMTSLQKQYYKWILTKNFDALRKGKRGS-TSTFLNIVIELKKCCNHAALIRPS-EFELM 288
Query: 178 YLSAKELLDFGIGASGKLKLLDMMLGEAKSSNKRVLVITQINLRAGKVSLMDVLDDYMR 2 L E L + SGKL LLD +L K + RVL+ +Q+ V ++DVL DY++ Sbjct: 289 GLQQDEALQTLLKGSGKLVLLDKLLCRLKETGHRVLIFSQM------VRMLDVLADYLQ 341
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